RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 GRM4Q14833 912 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 NR1I3Q14994 352 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 CT47A1Q5JQC4 288 aaPredicted RBP13.76□□□□□ -0.21
HDAC8-214ENST00000439122 PRR5LQ6MZQ0 368 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 ANKS1AQ92625 1134 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 SH3GLB2Q9NR46 395 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 FAM205AQ6ZU69 1335 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 SBF2Q86WG5 1849 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 TAF1LQ8IZX4 1826 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 ZSCAN12O43309 604 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 TUBB4AP04350 444 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 GNAQP50148 359 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 PPP4CP60510 307 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 ETF1P62495 437 aaKnown RBP13.76□□□□□ -0.21
HDAC8-214ENST00000439122 CUL4BQ13620 913 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 E2F4Q16254 413 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 CCDC178Q5BJE1 867 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 HEATR3Q7Z4Q2 680 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 TMEM139Q8IV31 216 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 TC2NQ8N9U0 490 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 ERO1AQ96HE7 468 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 DNAI1Q9UI46 699 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 ROBO3Q96MS0 1386 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.75□□□□□ -0.21
HDAC8-214ENST00000439122 A0A1B0GTH6 734 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 CCDC194A0A1B0GVG4 234 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 PPP1R3GB7ZBB8 358 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 CDC25AP30304 524 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 NT5C2P49902 561 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 TYW1BQ6NUM6 668 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 PYM1Q9BRP8 204 aaKnown RBP13.75□□□□□ -0.21
HDAC8-214ENST00000439122 RTFDC1Q9BY42 306 aaPredicted RBP13.75□□□□□ -0.21
HDAC8-214ENST00000439122 CD209Q9NNX6 404 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 CGNQ9P2M7 1197 aaKnown RBP13.75□□□□□ -0.21
HDAC8-214ENST00000439122 SPDYE4A6NLX3 237 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 IGSF3O75054 1194 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 TXLNAP40222 546 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 BTDP43251 543 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 CBX1P83916 185 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 ARL6IP4Q66PJ3 421 aaKnown RBP13.75□□□□□ -0.21
HDAC8-214ENST00000439122 PDXDC2PQ6P474 469 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 FCHSD1Q86WN1 690 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 REXO1L1PQ8IX06 675 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 TMEM47Q9BQJ4 181 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 LRRC4BQ9NT99 713 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 CTNND2Q9UQB3 1225 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 PPP2R2CQ9Y2T4 447 aa13.75□□□□□ -0.21
HDAC8-214ENST00000439122 TEX33O43247 280 aa13.74□□□□□ -0.21
HDAC8-214ENST00000439122 CYTH3O43739 400 aa13.74□□□□□ -0.21
HDAC8-214ENST00000439122 STX10O60499 249 aa13.74□□□□□ -0.21
HDAC8-214ENST00000439122 GOLGA8HP0CJ92 632 aa13.74□□□□□ -0.21
HDAC8-214ENST00000439122 LONP1P36776 959 aaKnown RBP13.74□□□□□ -0.21
HDAC8-214ENST00000439122 WWC2Q6AWC2 1192 aa13.74□□□□□ -0.21
HDAC8-214ENST00000439122 FAM177A1Q8N128 213 aaPredicted RBP13.74□□□□□ -0.21
HDAC8-214ENST00000439122 L2HGDHQ9H9P8 463 aa13.74□□□□□ -0.21
HDAC8-214ENST00000439122 ZNF287Q9HBT7 754 aa13.74□□□□□ -0.21
HDAC8-214ENST00000439122 TCP11L1Q9NUJ3 509 aa13.74□□□□□ -0.21
HDAC8-214ENST00000439122 COBLO75128 1261 aa13.74□□□□□ -0.21
HDAC8-214ENST00000439122 RASA1P20936 1047 aa13.74□□□□□ -0.21
HDAC8-214ENST00000439122 ELF2Q15723 593 aa13.74□□□□□ -0.21
HDAC8-214ENST00000439122 SLC35G1Q2M3R5 365 aa13.74□□□□□ -0.21
HDAC8-214ENST00000439122 RRAGBQ5VZM2 374 aa13.74□□□□□ -0.21
HDAC8-214ENST00000439122 C4orf32Q8N8J7 132 aa13.74□□□□□ -0.21
HDAC8-214ENST00000439122 CCDC148Q8NFR7 591 aa13.74□□□□□ -0.21
HDAC8-214ENST00000439122 MTRQ99707 1265 aa13.74□□□□□ -0.21
HDAC8-214ENST00000439122 GGA1Q9UJY5 639 aa13.74□□□□□ -0.21
HDAC8-214ENST00000439122 LY75O60449 1722 aa13.74□□□□□ -0.21
HDAC8-214ENST00000439122 THSD7AQ9UPZ6 1657 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 GTPBP6O43824 516 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-214ENST00000439122 STAT6P42226 847 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 ST5P78524 1137 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 TRIM65Q6PJ69 517 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 DTHD1Q6ZMT9 781 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 C15orf52Q6ZUT6 534 aaKnown RBP13.73□□□□□ -0.21
HDAC8-214ENST00000439122 TOGARAM2Q6ZUX3 1019 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 APTXQ7Z2E3 356 aaKnown RBP13.73□□□□□ -0.21
HDAC8-214ENST00000439122 TEX11Q8IYF3 940 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 RASSF8Q8NHQ8 419 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 GJD4Q96KN9 370 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-214ENST00000439122 CTAGE1Q96RT6 745 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 EYA3Q99504 573 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 PCDHA6Q9UN73 950 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 PCDHA8Q9Y5H6 950 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 PHLPP2Q6ZVD8 1323 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 NAV1Q8NEY1 1877 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 CDK8P49336 464 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 KARSQ15046 597 aaKnown RBP13.73□□□□□ -0.21
HDAC8-214ENST00000439122 INF2Q27J81 1249 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 FILIP1LQ4L180 1135 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 MFSD14BQ5SR56 506 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 CDKAL1Q5VV42 579 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 RASGRP2Q7LDG7 609 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 IGSF22Q8N9C0 903 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 CPVLQ9H3G5 476 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 BARHL2Q9NY43 387 aa13.73□□□□□ -0.21
HDAC8-214ENST00000439122 ADD3Q9UEY8 706 aaKnown RBP13.73□□□□□ -0.21
HDAC8-214ENST00000439122 PALM3A6NDB9 673 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-214ENST00000439122 AKR1B15C9JRZ8 316 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-214ENST00000439122 KLRF2D3W0D1 207 aa13.72□□□□□ -0.21
HDAC8-214ENST00000439122 M0R2N6 131 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms