RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 BARHL2Q9NY43 387 aa17.22■□□□□ 0.35
LINC00163-202ENST00000439088 PCDHA4Q9UN74 947 aa17.22■□□□□ 0.35
LINC00163-202ENST00000439088 HPSEQ9Y251 543 aa17.22■□□□□ 0.35
LINC00163-202ENST00000439088 COL2A1P02458 1487 aaPredicted RBP17.22■□□□□ 0.35
LINC00163-202ENST00000439088 FAM205CA6NFA0 338 aa17.21■□□□□ 0.35
LINC00163-202ENST00000439088 MPHOSPH10O00566 681 aaKnown RBP17.21■□□□□ 0.35
LINC00163-202ENST00000439088 BMP15O95972 392 aa17.21■□□□□ 0.35
LINC00163-202ENST00000439088 TRAPPC10P48553 1259 aa17.21■□□□□ 0.35
LINC00163-202ENST00000439088 DLGAP5Q15398 846 aa17.21■□□□□ 0.35
LINC00163-202ENST00000439088 BLIDQ8IZY5 108 aa17.21■□□□□ 0.35
LINC00163-202ENST00000439088 ZNF579Q8NAF0 562 aaKnown RBP17.21■□□□□ 0.35
LINC00163-202ENST00000439088 GPKOWQ92917 476 aaPredicted RBP eCLIP17.21■□□□□ 0.35
LINC00163-202ENST00000439088 RRP36Q96EU6 259 aaKnown RBP17.21■□□□□ 0.35
LINC00163-202ENST00000439088 TIGD1Q96MW7 591 aa17.21■□□□□ 0.35
LINC00163-202ENST00000439088 CLIC6Q96NY7 704 aa17.21■□□□□ 0.35
LINC00163-202ENST00000439088 TMOD2Q9NZR1 351 aa17.21■□□□□ 0.35
LINC00163-202ENST00000439088 FBXO2Q9UK22 296 aaPredicted RBP17.21■□□□□ 0.35
LINC00163-202ENST00000439088 CD2APQ9Y5K6 639 aa17.21■□□□□ 0.35
LINC00163-202ENST00000439088 ATP2B1P20020 1258 aa17.21■□□□□ 0.35
LINC00163-202ENST00000439088 R3HDM1Q15032 1099 aaKnown RBP17.21■□□□□ 0.35
LINC00163-202ENST00000439088 WWC2Q6AWC2 1192 aa17.21■□□□□ 0.35
LINC00163-202ENST00000439088 RASGRP2Q7LDG7 609 aa17.21■□□□□ 0.35
LINC00163-202ENST00000439088 LRRC47Q8N1G4 583 aaKnown RBP17.21■□□□□ 0.35
LINC00163-202ENST00000439088 DAGLBQ8NCG7 672 aa17.21■□□□□ 0.35
LINC00163-202ENST00000439088 PDLIM2Q96JY6 352 aa17.21■□□□□ 0.35
LINC00163-202ENST00000439088 RIOX1Q9H6W3 641 aa17.21■□□□□ 0.35
LINC00163-202ENST00000439088 SRPRBQ9Y5M8 271 aaKnown RBP17.21■□□□□ 0.35
LINC00163-202ENST00000439088 GREB1LQ9C091 1923 aaPredicted RBP17.2■□□□□ 0.34
LINC00163-202ENST00000439088 SIPA1L1O43166 1804 aa17.2■□□□□ 0.34
LINC00163-202ENST00000439088 STXBP3O00186 592 aa17.2■□□□□ 0.34
LINC00163-202ENST00000439088 CAVIN2O95810 425 aa17.2■□□□□ 0.34
LINC00163-202ENST00000439088 EIF6P56537 245 aaKnown RBP17.2■□□□□ 0.34
LINC00163-202ENST00000439088 HEATR3Q7Z4Q2 680 aa17.2■□□□□ 0.34
LINC00163-202ENST00000439088 MTMR14Q8NCE2 650 aa17.2■□□□□ 0.34
LINC00163-202ENST00000439088 TAOK3Q9H2K8 898 aa17.2■□□□□ 0.34
LINC00163-202ENST00000439088 ZBTB12Q9Y330 459 aaPredicted RBP17.2■□□□□ 0.34
LINC00163-202ENST00000439088 SLURP2P0DP57 97 aa17.2■□□□□ 0.34
LINC00163-202ENST00000439088 SYKP43405 635 aa17.2■□□□□ 0.34
LINC00163-202ENST00000439088 CXCL9Q07325 125 aa17.2■□□□□ 0.34
LINC00163-202ENST00000439088 TYW1BQ6NUM6 668 aa17.2■□□□□ 0.34
LINC00163-202ENST00000439088 FAM200AQ8TCP9 573 aa17.2■□□□□ 0.34
LINC00163-202ENST00000439088 MKL1Q969V6 931 aa17.2■□□□□ 0.34
LINC00163-202ENST00000439088 SGIP1Q9BQI5 828 aa17.2■□□□□ 0.34
LINC00163-202ENST00000439088 KANSL2Q9H9L4 492 aa17.2■□□□□ 0.34
LINC00163-202ENST00000439088 ANO6Q4KMQ2 910 aa17.19■□□□□ 0.34
LINC00163-202ENST00000439088 CLEC10AQ8IUN9 316 aa17.19■□□□□ 0.34
LINC00163-202ENST00000439088 CCDC12Q8WUD4 166 aaPredicted RBP17.19■□□□□ 0.34
LINC00163-202ENST00000439088 CPVLQ9H3G5 476 aa17.19■□□□□ 0.34
LINC00163-202ENST00000439088 NYAP2Q9P242 653 aa17.19■□□□□ 0.34
LINC00163-202ENST00000439088 ZNF70Q9UC06 446 aaPredicted RBP17.19■□□□□ 0.34
LINC00163-202ENST00000439088 SEC63Q9UGP8 760 aaKnown RBP17.19■□□□□ 0.34
LINC00163-202ENST00000439088 FAM196BA6NMK8 535 aa17.18■□□□□ 0.34
LINC00163-202ENST00000439088 M0R2N6 131 aa17.18■□□□□ 0.34
LINC00163-202ENST00000439088 ZNF543Q08ER8 600 aa17.18■□□□□ 0.34
LINC00163-202ENST00000439088 NOM1Q5C9Z4 860 aaKnown RBP17.18■□□□□ 0.34
LINC00163-202ENST00000439088 TTC38Q5R3I4 469 aa17.18■□□□□ 0.34
LINC00163-202ENST00000439088 PIK3AP1Q6ZUJ8 805 aa17.18■□□□□ 0.34
LINC00163-202ENST00000439088 JDP2Q8WYK2 163 aa17.18■□□□□ 0.34
LINC00163-202ENST00000439088 UBA5Q9GZZ9 404 aa17.18■□□□□ 0.34
LINC00163-202ENST00000439088 PPP1R1BQ9UD71 204 aaPredicted RBP17.18■□□□□ 0.34
LINC00163-202ENST00000439088 FKBP1CQ5VVH2 108 aa17.18■□□□□ 0.34
LINC00163-202ENST00000439088 TMEM179Q6ZVK1 233 aa17.18■□□□□ 0.34
LINC00163-202ENST00000439088 FAM151AQ8WW52 585 aa17.18■□□□□ 0.34
LINC00163-202ENST00000439088 ZMYND12Q9H0C1 365 aa17.18■□□□□ 0.34
LINC00163-202ENST00000439088 VAT1LQ9HCJ6 419 aa17.18■□□□□ 0.34
LINC00163-202ENST00000439088 FAM13BQ9NYF5 915 aa17.18■□□□□ 0.34
LINC00163-202ENST00000439088 KCNH3Q9ULD8 1083 aa17.18■□□□□ 0.34
LINC00163-202ENST00000439088 BRCA1P38398 1863 aaKnown RBP17.18■□□□□ 0.34
LINC00163-202ENST00000439088 FRMPD2Q68DX3 1309 aaPredicted RBP17.18■□□□□ 0.34
LINC00163-202ENST00000439088 FER1L6Q2WGJ9 1857 aa17.17■□□□□ 0.34
LINC00163-202ENST00000439088 hCG_1984214I3L0E3 225 aa17.17■□□□□ 0.34
LINC00163-202ENST00000439088 ADAMTS3O15072 1205 aa17.17■□□□□ 0.34
LINC00163-202ENST00000439088 SPDYE2Q495Y8 402 aa17.17■□□□□ 0.34
LINC00163-202ENST00000439088 GPATCH4Q5T3I0 446 aaKnown RBP17.17■□□□□ 0.34
LINC00163-202ENST00000439088 CIAPIN1Q6FI81 312 aa17.17■□□□□ 0.34
LINC00163-202ENST00000439088 ZNF713Q8N859 430 aaPredicted RBP17.17■□□□□ 0.34
LINC00163-202ENST00000439088 PIGSQ96S52 555 aa17.17■□□□□ 0.34
LINC00163-202ENST00000439088 CSRNP1Q96S65 589 aa17.17■□□□□ 0.34
LINC00163-202ENST00000439088 KIAA1468Q9P260 1216 aa17.17■□□□□ 0.34
LINC00163-202ENST00000439088 HERC5Q9UII4 1024 aaKnown RBP17.17■□□□□ 0.34
LINC00163-202ENST00000439088 TCP10L2B9ZVM9 353 aa17.17■□□□□ 0.34
LINC00163-202ENST00000439088 EEF2P13639 858 aaKnown RBP17.17■□□□□ 0.34
LINC00163-202ENST00000439088 MMP14P50281 582 aa17.17■□□□□ 0.34
LINC00163-202ENST00000439088 ATP2B2Q01814 1243 aa17.17■□□□□ 0.34
LINC00163-202ENST00000439088 ZNF174Q15697 407 aa17.17■□□□□ 0.34
LINC00163-202ENST00000439088 STX1AQ16623 288 aa17.17■□□□□ 0.34
LINC00163-202ENST00000439088 ABCB5Q2M3G0 1257 aa17.17■□□□□ 0.34
LINC00163-202ENST00000439088 FERMT2Q96AC1 680 aa17.17■□□□□ 0.34
LINC00163-202ENST00000439088 PCDHA6Q9UN73 950 aa17.17■□□□□ 0.34
LINC00163-202ENST00000439088 PCDHA8Q9Y5H6 950 aa17.17■□□□□ 0.34
LINC00163-202ENST00000439088 CLRN2A0PK11 232 aa17.16■□□□□ 0.34
LINC00163-202ENST00000439088 NFKBIEO00221 500 aa17.16■□□□□ 0.34
LINC00163-202ENST00000439088 GNA11P29992 359 aa17.16■□□□□ 0.34
LINC00163-202ENST00000439088 NAPAP54920 295 aa17.16■□□□□ 0.34
LINC00163-202ENST00000439088 TNIP1Q15025 636 aa17.16■□□□□ 0.34
LINC00163-202ENST00000439088 HOMER1Q86YM7 354 aa17.16■□□□□ 0.34
LINC00163-202ENST00000439088 ELOA2Q8IYF1 753 aaPredicted RBP17.16■□□□□ 0.34
LINC00163-202ENST00000439088 TRIM44Q96DX7 344 aaPredicted RBP17.16■□□□□ 0.34
LINC00163-202ENST00000439088 C6orf50Q9HD87 102 aa17.16■□□□□ 0.34
LINC00163-202ENST00000439088 GPCPD1Q9NPB8 672 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms