RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 TUBE1Q9UJT0 475 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 V9GY48 417 aaPredicted RBP15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 USP17L3A6NCW0 530 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 USP17L4A6NCW7 530 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 PPIP5K2O43314 1243 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 TSPY3P0CV98 308 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 TSPY8P0CW00 308 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 CALM1P0DP23 149 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 CALM2P0DP24 149 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 CALM3P0DP25 149 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 SKILP12757 684 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 ATP1A3P13637 1013 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 KCNA3P22001 575 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 CDK8P49336 464 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 PPP2R5BQ15173 497 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 C16orf86Q6ZW13 317 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 USP17L1Q7RTZ2 530 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 FOXP4Q8IVH2 680 aaPredicted RBP15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 SUPT20HQ8NEM7 779 aa15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 RNF26Q9BY78 433 aaPredicted RBP15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 DDX4Q9NQI0 724 aaKnown RBP15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 DDX41Q9UJV9 622 aaKnown RBP15.86■□□□□ 0.13
PTCHD3-201ENST00000438700 FAM237AA0A1B0GTK4 181 aa15.85■□□□□ 0.13
PTCHD3-201ENST00000438700 CRKP46108 304 aa15.85■□□□□ 0.13
PTCHD3-201ENST00000438700 NT5C2P49902 561 aa15.85■□□□□ 0.13
PTCHD3-201ENST00000438700 PKN1Q16512 942 aa15.85■□□□□ 0.13
PTCHD3-201ENST00000438700 CEP135Q66GS9 1140 aa15.85■□□□□ 0.13
PTCHD3-201ENST00000438700 PDILTQ8N807 584 aa15.85■□□□□ 0.13
PTCHD3-201ENST00000438700 ZNF287Q9HBT7 754 aa15.85■□□□□ 0.13
PTCHD3-201ENST00000438700 CGNQ9P2M7 1197 aaKnown RBP15.85■□□□□ 0.13
PTCHD3-201ENST00000438700 FBXO2Q9UK22 296 aaPredicted RBP15.85■□□□□ 0.13
PTCHD3-201ENST00000438700 ZNF215Q9UL58 517 aaPredicted RBP15.85■□□□□ 0.13
PTCHD3-201ENST00000438700 KMT5BQ4FZB7 885 aa15.85■□□□□ 0.13
PTCHD3-201ENST00000438700 CCDC93Q567U6 631 aa15.85■□□□□ 0.13
PTCHD3-201ENST00000438700 APOBEC3HQ6NTF7 200 aaKnown RBP15.85■□□□□ 0.13
PTCHD3-201ENST00000438700 CDC42EP5Q6NZY7 148 aa15.85■□□□□ 0.13
PTCHD3-201ENST00000438700 CCDC125Q86Z20 511 aa15.85■□□□□ 0.13
PTCHD3-201ENST00000438700 RBM28Q9NW13 759 aaKnown RBP15.85■□□□□ 0.13
PTCHD3-201ENST00000438700 PCDHA5Q9Y5H7 936 aa15.85■□□□□ 0.13
PTCHD3-201ENST00000438700 POLR2DO15514 142 aaKnown RBP15.84■□□□□ 0.13
PTCHD3-201ENST00000438700 FKBP1AP62942 108 aaKnown RBP15.84■□□□□ 0.13
PTCHD3-201ENST00000438700 TPM4P67936 248 aa15.84■□□□□ 0.13
PTCHD3-201ENST00000438700 EARS2Q5JPH6 523 aaKnown RBP15.84■□□□□ 0.13
PTCHD3-201ENST00000438700 KAT14Q9H8E8 782 aa15.84■□□□□ 0.13
PTCHD3-201ENST00000438700 ST7Q9NRC1 585 aa15.84■□□□□ 0.13
PTCHD3-201ENST00000438700 SLFN14P0C7P3 912 aa15.84■□□□□ 0.13
PTCHD3-201ENST00000438700 PTPREP23469 700 aa15.84■□□□□ 0.13
PTCHD3-201ENST00000438700 FUT2Q10981 343 aa15.84■□□□□ 0.13
PTCHD3-201ENST00000438700 USP49Q70CQ1 688 aa15.84■□□□□ 0.13
PTCHD3-201ENST00000438700 TMC6Q7Z403 805 aa15.84■□□□□ 0.13
PTCHD3-201ENST00000438700 DGKHQ86XP1 1220 aa15.84■□□□□ 0.13
PTCHD3-201ENST00000438700 CTCFLQ8NI51 663 aaPredicted RBP15.84■□□□□ 0.13
PTCHD3-201ENST00000438700 KIF18AQ8NI77 898 aa15.84■□□□□ 0.13
PTCHD3-201ENST00000438700 ATF5Q9Y2D1 282 aaPredicted RBP15.84■□□□□ 0.13
PTCHD3-201ENST00000438700 PCDHAC2Q9Y5I4 1007 aa15.84■□□□□ 0.13
PTCHD3-201ENST00000438700 YDJCA8MPS7 323 aa15.83■□□□□ 0.12
PTCHD3-201ENST00000438700 CCZ1BP86790 482 aa15.83■□□□□ 0.12
PTCHD3-201ENST00000438700 CCZ1P86791 482 aaPredicted RBP15.83■□□□□ 0.12
PTCHD3-201ENST00000438700 TMTC3Q6ZXV5 915 aa15.83■□□□□ 0.12
PTCHD3-201ENST00000438700 GRAMD1CQ8IYS0 662 aa15.83■□□□□ 0.12
PTCHD3-201ENST00000438700 ZDHHC15Q96MV8 337 aa15.83■□□□□ 0.12
PTCHD3-201ENST00000438700 HSD3B7Q9H2F3 369 aa15.83■□□□□ 0.12
PTCHD3-201ENST00000438700 MYH8P13535 1937 aa15.83■□□□□ 0.12
PTCHD3-201ENST00000438700 XBP1P17861 261 aa15.83■□□□□ 0.12
PTCHD3-201ENST00000438700 RTKN2Q8IZC4 609 aa15.83■□□□□ 0.12
PTCHD3-201ENST00000438700 TCP11L1Q9NUJ3 509 aa15.83■□□□□ 0.12
PTCHD3-201ENST00000438700 NEMFO60524 1076 aa15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 BMP6P22004 513 aa15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 RBM5P52756 815 aaKnown RBP eCLIP15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 HSP90AA4PQ58FG1 418 aa15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 NOM1Q5C9Z4 860 aaKnown RBP15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 PNMA1Q8ND90 353 aa15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 ANKS1AQ92625 1134 aa15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 CSRNP2Q9H175 543 aa15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 SERTAD1Q9UHV2 236 aa15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 PAXBP1Q9Y5B6 917 aa15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 WNT7AO00755 349 aa15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 IKBKBO14920 756 aa15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 PRR29P0C7W0 189 aa15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 KRT2P35908 639 aa15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 FANCCQ00597 558 aa15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 NFIAQ12857 509 aa15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 GRIPAP1Q4V328 841 aa15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 CCDC178Q5BJE1 867 aa15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 PHF20Q9BVI0 1012 aa15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 STX8Q9UNK0 236 aa15.82■□□□□ 0.12
PTCHD3-201ENST00000438700 PSME4Q14997 1843 aa15.81■□□□□ 0.12
PTCHD3-201ENST00000438700 PRPF3O43395 683 aaKnown RBP15.81■□□□□ 0.12
PTCHD3-201ENST00000438700 MYL5Q02045 173 aa15.81■□□□□ 0.12
PTCHD3-201ENST00000438700 POSTNQ15063 836 aa15.81■□□□□ 0.12
PTCHD3-201ENST00000438700 ELF2Q15723 593 aa15.81■□□□□ 0.12
PTCHD3-201ENST00000438700 PTPN21Q16825 1174 aa15.81■□□□□ 0.12
PTCHD3-201ENST00000438700 PSMD1Q99460 953 aa15.81■□□□□ 0.12
PTCHD3-201ENST00000438700 OSBPL5Q9H0X9 879 aaPredicted RBP15.81■□□□□ 0.12
PTCHD3-201ENST00000438700 ZNF277Q9NRM2 450 aaPredicted RBP15.81■□□□□ 0.12
PTCHD3-201ENST00000438700 CNTNAP5Q8WYK1 1306 aa15.81■□□□□ 0.12
PTCHD3-201ENST00000438700 CACNB3P54284 484 aa15.81■□□□□ 0.12
PTCHD3-201ENST00000438700 MDM2Q00987 491 aaPredicted RBP15.81■□□□□ 0.12
PTCHD3-201ENST00000438700 SRBD1Q8N5C6 995 aaKnown RBP15.81■□□□□ 0.12
PTCHD3-201ENST00000438700 MRIQ9BWK5 157 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms