RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 ZAP70P43403 619 aa20.28■□□□□ 0.84
KCNC4-204ENST00000438661 FNTAP49354 379 aa20.28■□□□□ 0.84
KCNC4-204ENST00000438661 HERVK_113P62684 666 aa20.28■□□□□ 0.84
KCNC4-204ENST00000438661 APBA1Q02410 837 aa20.28■□□□□ 0.84
KCNC4-204ENST00000438661 SMCR8Q8TEV9 937 aaPredicted RBP20.28■□□□□ 0.84
KCNC4-204ENST00000438661 ZKSCAN3Q9BRR0 538 aa20.28■□□□□ 0.84
KCNC4-204ENST00000438661 VPS54Q9P1Q0 977 aa20.28■□□□□ 0.84
KCNC4-204ENST00000438661 RCCD1A6NED2 376 aa20.27■□□□□ 0.84
KCNC4-204ENST00000438661 SH2B2O14492 632 aaPredicted RBP20.27■□□□□ 0.84
KCNC4-204ENST00000438661 NTRK3Q16288 839 aa20.27■□□□□ 0.84
KCNC4-204ENST00000438661 GPR108Q9NPR9 543 aa20.27■□□□□ 0.84
KCNC4-204ENST00000438661 ARFGEF2Q9Y6D5 1785 aa20.27■□□□□ 0.84
KCNC4-204ENST00000438661 GOLGA8KD6RF30 607 aa20.27■□□□□ 0.83
KCNC4-204ENST00000438661 OPA1O60313 960 aa20.27■□□□□ 0.83
KCNC4-204ENST00000438661 NEDD9Q14511 834 aa20.27■□□□□ 0.83
KCNC4-204ENST00000438661 PROSER2Q86WR7 435 aaPredicted RBP20.27■□□□□ 0.83
KCNC4-204ENST00000438661 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.27■□□□□ 0.83
KCNC4-204ENST00000438661 EHD2Q9NZN4 543 aa20.27■□□□□ 0.83
KCNC4-204ENST00000438661 LUC7L2Q9Y383 392 aaKnown RBP20.27■□□□□ 0.83
KCNC4-204ENST00000438661 SLC12A7Q9Y666 1083 aa20.27■□□□□ 0.83
KCNC4-204ENST00000438661 ELF1P32519 619 aa20.26■□□□□ 0.83
KCNC4-204ENST00000438661 TTF1Q15361 905 aaPredicted RBP20.26■□□□□ 0.83
KCNC4-204ENST00000438661 RRP12Q5JTH9 1297 aaKnown RBP20.26■□□□□ 0.83
KCNC4-204ENST00000438661 SH3GL2Q99962 352 aa20.26■□□□□ 0.83
KCNC4-204ENST00000438661 SLC24A3Q9HC58 644 aa20.26■□□□□ 0.83
KCNC4-204ENST00000438661 KLC4Q9NSK0 619 aa20.26■□□□□ 0.83
KCNC4-204ENST00000438661 ODF2LQ9ULJ1 636 aa20.26■□□□□ 0.83
KCNC4-204ENST00000438661 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.26■□□□□ 0.83
KCNC4-204ENST00000438661 KCNJ18B7U540 433 aa20.26■□□□□ 0.83
KCNC4-204ENST00000438661 HSF2BPO75031 334 aa20.26■□□□□ 0.83
KCNC4-204ENST00000438661 KCNJ12Q14500 433 aa20.26■□□□□ 0.83
KCNC4-204ENST00000438661 OR8K1Q8NGG5 319 aa20.26■□□□□ 0.83
KCNC4-204ENST00000438661 AENQ8WTP8 325 aaKnown RBP20.26■□□□□ 0.83
KCNC4-204ENST00000438661 FAM217BQ9NTX9 383 aaPredicted RBP20.26■□□□□ 0.83
KCNC4-204ENST00000438661 SRPRBQ9Y5M8 271 aaKnown RBP20.26■□□□□ 0.83
KCNC4-204ENST00000438661 KRT86O43790 486 aa20.25■□□□□ 0.83
KCNC4-204ENST00000438661 ATP2C2O75185 946 aa20.25■□□□□ 0.83
KCNC4-204ENST00000438661 NEBLO76041 1014 aa20.25■□□□□ 0.83
KCNC4-204ENST00000438661 MMP1P03956 469 aa20.25■□□□□ 0.83
KCNC4-204ENST00000438661 NNTQ13423 1086 aa20.25■□□□□ 0.83
KCNC4-204ENST00000438661 PAPD7Q5XG87 772 aaKnown RBP20.25■□□□□ 0.83
KCNC4-204ENST00000438661 SYMPKQ92797 1274 aaKnown RBP20.25■□□□□ 0.83
KCNC4-204ENST00000438661 IFIT3O14879 490 aaKnown RBP20.25■□□□□ 0.83
KCNC4-204ENST00000438661 CHUKO15111 745 aa20.25■□□□□ 0.83
KCNC4-204ENST00000438661 SF3B2Q13435 895 aaKnown RBP20.25■□□□□ 0.83
KCNC4-204ENST00000438661 RILPL1Q5EBL4 403 aa20.25■□□□□ 0.83
KCNC4-204ENST00000438661 SPATA20Q8TB22 786 aa20.25■□□□□ 0.83
KCNC4-204ENST00000438661 SCLT1Q96NL6 688 aa20.25■□□□□ 0.83
KCNC4-204ENST00000438661 CPDO75976 1380 aa20.25■□□□□ 0.83
KCNC4-204ENST00000438661 hCG_1642624A0A1W2PR95 340 aa20.25■□□□□ 0.83
KCNC4-204ENST00000438661 CEP126Q9P2H0 1117 aa20.25■□□□□ 0.83
KCNC4-204ENST00000438661 KCNG1Q9UIX4 513 aa20.25■□□□□ 0.83
KCNC4-204ENST00000438661 IPO7O95373 1038 aaKnown RBP20.24■□□□□ 0.83
KCNC4-204ENST00000438661 CDR1P51861 262 aa20.24■□□□□ 0.83
KCNC4-204ENST00000438661 E2F5Q15329 346 aa20.24■□□□□ 0.83
KCNC4-204ENST00000438661 RNPC3Q96LT9 517 aaKnown RBP20.24■□□□□ 0.83
KCNC4-204ENST00000438661 VEZTQ9HBM0 779 aa20.24■□□□□ 0.83
KCNC4-204ENST00000438661 LMTK3Q96Q04 1460 aa20.24■□□□□ 0.83
KCNC4-204ENST00000438661 DNA2P51530 1060 aa20.24■□□□□ 0.83
KCNC4-204ENST00000438661 CEP85LQ5SZL2 805 aa20.24■□□□□ 0.83
KCNC4-204ENST00000438661 ELOA2Q8IYF1 753 aaPredicted RBP20.24■□□□□ 0.83
KCNC4-204ENST00000438661 NUP133Q8WUM0 1156 aa20.24■□□□□ 0.83
KCNC4-204ENST00000438661 PAX7P23759 505 aa20.23■□□□□ 0.83
KCNC4-204ENST00000438661 CCDC40Q4G0X9 1142 aa20.23■□□□□ 0.83
KCNC4-204ENST00000438661 TCP11X2Q5H9J9 407 aa20.23■□□□□ 0.83
KCNC4-204ENST00000438661 APPBP2Q92624 585 aa20.23■□□□□ 0.83
KCNC4-204ENST00000438661 RPGRIP1Q96KN7 1286 aa20.23■□□□□ 0.83
KCNC4-204ENST00000438661 PCMTD1Q96MG8 357 aaPredicted RBP20.23■□□□□ 0.83
KCNC4-204ENST00000438661 ITIH6Q6UXX5 1313 aa20.23■□□□□ 0.83
KCNC4-204ENST00000438661 NAA35Q5VZE5 725 aa20.23■□□□□ 0.83
KCNC4-204ENST00000438661 PDHBP11177 359 aa20.22■□□□□ 0.83
KCNC4-204ENST00000438661 FECHP22830 423 aa20.22■□□□□ 0.83
KCNC4-204ENST00000438661 LSP1P33241 339 aa20.22■□□□□ 0.83
KCNC4-204ENST00000438661 NELFBQ8WX92 580 aa20.22■□□□□ 0.83
KCNC4-204ENST00000438661 XAGE2Q96GT9 111 aa20.22■□□□□ 0.83
KCNC4-204ENST00000438661 ZIM3Q96PE6 472 aa20.22■□□□□ 0.83
KCNC4-204ENST00000438661 STRN4Q9NRL3 753 aa20.22■□□□□ 0.83
KCNC4-204ENST00000438661 ZNF330Q9Y3S2 320 aaPredicted RBP20.22■□□□□ 0.83
KCNC4-204ENST00000438661 TRIM49BA6NDI0 452 aa20.22■□□□□ 0.83
KCNC4-204ENST00000438661 FSBPO95073 299 aa20.22■□□□□ 0.83
KCNC4-204ENST00000438661 AMOTL1Q8IY63 956 aa20.22■□□□□ 0.83
KCNC4-204ENST00000438661 TRIM22Q8IYM9 498 aa20.22■□□□□ 0.83
KCNC4-204ENST00000438661 IFT81Q8WYA0 676 aa20.22■□□□□ 0.83
KCNC4-204ENST00000438661 MIEF2Q96C03 454 aa20.22■□□□□ 0.83
KCNC4-204ENST00000438661 CCDC114Q96M63 670 aa20.22■□□□□ 0.83
KCNC4-204ENST00000438661 PPANQ9NQ55 473 aaKnown RBP20.22■□□□□ 0.83
KCNC4-204ENST00000438661 TRPM3Q9HCF6 1732 aaPredicted RBP20.22■□□□□ 0.83
KCNC4-204ENST00000438661 ESYT3A0FGR9 886 aa20.22■□□□□ 0.83
KCNC4-204ENST00000438661 HPDP32754 393 aaPredicted RBP20.22■□□□□ 0.83
KCNC4-204ENST00000438661 HDLBPQ00341 1268 aaKnown RBP20.22■□□□□ 0.83
KCNC4-204ENST00000438661 IQCA1Q86XH1 822 aa20.22■□□□□ 0.83
KCNC4-204ENST00000438661 CCDC13Q8IYE1 715 aa20.22■□□□□ 0.83
KCNC4-204ENST00000438661 AGPAT5Q9NUQ2 364 aa20.22■□□□□ 0.83
KCNC4-204ENST00000438661 E7EVH7 732 aa20.21■□□□□ 0.83
KCNC4-204ENST00000438661 IDH1O75874 414 aaKnown RBP20.21■□□□□ 0.83
KCNC4-204ENST00000438661 NAP1L1P55209 391 aaKnown RBP20.21■□□□□ 0.83
KCNC4-204ENST00000438661 CTDSPL2Q05D32 466 aa20.21■□□□□ 0.83
KCNC4-204ENST00000438661 IQCEQ6IPM2 695 aa20.21■□□□□ 0.83
KCNC4-204ENST00000438661 WDR59Q6PJI9 974 aa20.21■□□□□ 0.83
KCNC4-204ENST00000438661 ZPR1O75312 459 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms