RNA–Protein interactions for RNA: ENST00000435437.2

RPE-207, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-207ENST00000435437 MCMDC2Q4G0Z9 681 aa10.53□□□□□ -0.72
RPE-207ENST00000435437 FAM83BQ5T0W9 1011 aa10.53□□□□□ -0.72
RPE-207ENST00000435437 SLAIN1Q8ND83 568 aa10.53□□□□□ -0.72
RPE-207ENST00000435437 CRISPLD2Q9H0B8 497 aa10.53□□□□□ -0.72
RPE-207ENST00000435437 ZNF214Q9UL59 606 aaPredicted RBP10.53□□□□□ -0.72
RPE-207ENST00000435437 CCDC171Q6TFL3 1326 aa10.53□□□□□ -0.72
RPE-207ENST00000435437 PDE4DIPQ5VU43 2346 aa10.52□□□□□ -0.72
RPE-207ENST00000435437 F5H6K3 240 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 WDR46O15213 610 aaKnown RBP10.52□□□□□ -0.73
RPE-207ENST00000435437 COBLO75128 1261 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 APPP05067 770 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 GJB1P08034 283 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 CYP2B6P20813 491 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 PTPREP23469 700 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 KLRC3Q07444 240 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 COL9A3Q14050 684 aaPredicted RBP10.52□□□□□ -0.73
RPE-207ENST00000435437 GRB14Q14449 540 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 TTC22Q5TAA0 569 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 RCSD1Q6JBY9 416 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 PLEKHH3Q7Z736 793 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 LRRC47Q8N1G4 583 aaKnown RBP10.52□□□□□ -0.73
RPE-207ENST00000435437 TRPV1Q8NER1 839 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 LPAR1Q92633 364 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 RILPL2Q969X0 211 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 COA7Q96BR5 231 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 NAPBQ9H115 298 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 ARHGEF10LQ9HCE6 1279 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 CLIP2Q9UDT6 1046 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 RIPK3Q9Y572 518 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 TAF6LQ9Y6J9 622 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 ZMYM6O95789 1325 aa10.52□□□□□ -0.73
RPE-207ENST00000435437 TRIM6-TRIM34B2RNG4 842 aa10.51□□□□□ -0.73
RPE-207ENST00000435437 ORC4O43929 436 aa10.51□□□□□ -0.73
RPE-207ENST00000435437 ERCC3P19447 782 aa10.51□□□□□ -0.73
RPE-207ENST00000435437 CCND3P30281 292 aaPredicted RBP10.51□□□□□ -0.73
RPE-207ENST00000435437 TFAP4Q01664 338 aa10.51□□□□□ -0.73
RPE-207ENST00000435437 CACNB2Q08289 660 aaPredicted RBP10.51□□□□□ -0.73
RPE-207ENST00000435437 MAP2K5Q13163 448 aa10.51□□□□□ -0.73
RPE-207ENST00000435437 NBPF11Q86T75 865 aa10.51□□□□□ -0.73
RPE-207ENST00000435437 DIS3LQ8TF46 1054 aaKnown RBP10.51□□□□□ -0.73
RPE-207ENST00000435437 U2AF1L4Q8WU68 220 aaKnown RBP10.51□□□□□ -0.73
RPE-207ENST00000435437 FGD4Q96M96 766 aa10.51□□□□□ -0.73
RPE-207ENST00000435437 TANGO6Q9C0B7 1094 aa10.51□□□□□ -0.73
RPE-207ENST00000435437 SPATC1LQ9H0A9 340 aa10.51□□□□□ -0.73
RPE-207ENST00000435437 RNF208Q9H0X6 261 aa10.51□□□□□ -0.73
RPE-207ENST00000435437 PCDH10Q9P2E7 1040 aa10.51□□□□□ -0.73
RPE-207ENST00000435437 PPP1R9AQ9ULJ8 1098 aa10.51□□□□□ -0.73
RPE-207ENST00000435437 NEDD4P46934 1319 aa10.51□□□□□ -0.73
RPE-207ENST00000435437 VWA5AO00534 786 aa10.5□□□□□ -0.73
RPE-207ENST00000435437 FLOT1O75955 427 aa10.5□□□□□ -0.73
RPE-207ENST00000435437 SGPL1O95470 568 aa10.5□□□□□ -0.73
RPE-207ENST00000435437 HMGCRP04035 888 aa10.5□□□□□ -0.73
RPE-207ENST00000435437 HOXC6P09630 235 aa10.5□□□□□ -0.73
RPE-207ENST00000435437 XRCC5P13010 732 aaKnown RBP10.5□□□□□ -0.73
RPE-207ENST00000435437 TAL1P17542 331 aaPredicted RBP10.5□□□□□ -0.73
RPE-207ENST00000435437 MAPK4P31152 587 aa10.5□□□□□ -0.73
RPE-207ENST00000435437 HAND2P61296 217 aa10.5□□□□□ -0.73
RPE-207ENST00000435437 ATP2B2Q01814 1243 aa10.5□□□□□ -0.73
RPE-207ENST00000435437 TICAM2Q86XR7 235 aa10.5□□□□□ -0.73
RPE-207ENST00000435437 GTF3C2Q8WUA4 911 aaPredicted RBP10.5□□□□□ -0.73
RPE-207ENST00000435437 DDRGK1Q96HY6 314 aa10.5□□□□□ -0.73
RPE-207ENST00000435437 NUDT12Q9BQG2 462 aa10.5□□□□□ -0.73
RPE-207ENST00000435437 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.5□□□□□ -0.73
RPE-207ENST00000435437 MKNK2Q9HBH9 465 aa10.5□□□□□ -0.73
RPE-207ENST00000435437 ZNF536O15090 1300 aa10.5□□□□□ -0.73
RPE-207ENST00000435437 MCM3APO60318 1980 aa10.5□□□□□ -0.73
RPE-207ENST00000435437 LRRC37A2A6NM11 1700 aa10.5□□□□□ -0.73
RPE-207ENST00000435437 SLC15A5A6NIM6 579 aa10.49□□□□□ -0.73
RPE-207ENST00000435437 PTH1RQ03431 593 aa10.49□□□□□ -0.73
RPE-207ENST00000435437 LRRFIP1Q32MZ4 808 aaKnown RBP10.49□□□□□ -0.73
RPE-207ENST00000435437 CWC27Q6UX04 472 aaKnown RBP10.49□□□□□ -0.73
RPE-207ENST00000435437 AMOTL1Q8IY63 956 aa10.49□□□□□ -0.73
RPE-207ENST00000435437 ZNF444Q8N0Y2 327 aaPredicted RBP10.49□□□□□ -0.73
RPE-207ENST00000435437 GMCL1P1Q8NEA9 526 aa10.49□□□□□ -0.73
RPE-207ENST00000435437 SHCBP1Q8NEM2 672 aa10.49□□□□□ -0.73
RPE-207ENST00000435437 CHMP4CQ96CF2 233 aa10.49□□□□□ -0.73
RPE-207ENST00000435437 DEFB118Q96PH6 123 aa10.49□□□□□ -0.73
RPE-207ENST00000435437 APBA2Q99767 749 aa10.49□□□□□ -0.73
RPE-207ENST00000435437 TMEM106CQ9BVX2 250 aa10.49□□□□□ -0.73
RPE-207ENST00000435437 HOXC10Q9NYD6 342 aa10.49□□□□□ -0.73
RPE-207ENST00000435437 TTLL1O95922 423 aa10.48□□□□□ -0.73
RPE-207ENST00000435437 CHMLP26374 656 aa10.48□□□□□ -0.73
RPE-207ENST00000435437 ADORA2AP29274 412 aa10.48□□□□□ -0.73
RPE-207ENST00000435437 CYP2C19P33261 490 aa10.48□□□□□ -0.73
RPE-207ENST00000435437 UBXN2AP68543 259 aa10.48□□□□□ -0.73
RPE-207ENST00000435437 TTBK2Q6IQ55 1244 aa10.48□□□□□ -0.73
RPE-207ENST00000435437 RIOX2Q8IUF8 465 aa10.48□□□□□ -0.73
RPE-207ENST00000435437 STAG1Q8WVM7 1258 aa10.48□□□□□ -0.73
RPE-207ENST00000435437 SOCS4Q8WXH5 440 aa10.48□□□□□ -0.73
RPE-207ENST00000435437 NACAP1Q9BZK3 213 aa10.48□□□□□ -0.73
RPE-207ENST00000435437 DNAJC25-GNG10A0A024R161 153 aa10.47□□□□□ -0.73
RPE-207ENST00000435437 TSPY3P0CV98 308 aa10.47□□□□□ -0.73
RPE-207ENST00000435437 TSPY8P0CW00 308 aa10.47□□□□□ -0.73
RPE-207ENST00000435437 CYBAP13498 195 aa10.47□□□□□ -0.73
RPE-207ENST00000435437 PRKAR2AP13861 404 aaKnown RBP10.47□□□□□ -0.73
RPE-207ENST00000435437 RGS2P41220 211 aa10.47□□□□□ -0.73
RPE-207ENST00000435437 SNAP25P60880 206 aa10.47□□□□□ -0.73
RPE-207ENST00000435437 PDE4BQ07343 736 aa10.47□□□□□ -0.73
RPE-207ENST00000435437 ZNF792Q3KQV3 632 aa10.47□□□□□ -0.73
RPE-207ENST00000435437 PRAMEF19Q5SWL8 479 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms