RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 PNMA1Q8ND90 353 aa21.13■□□□□ 0.97
CLK1-205ENST00000434813 ERO1AQ96HE7 468 aa21.13■□□□□ 0.97
CLK1-205ENST00000434813 ARID3AQ99856 593 aa21.13■□□□□ 0.97
CLK1-205ENST00000434813 SAMSN1Q9NSI8 373 aaKnown RBP21.13■□□□□ 0.97
CLK1-205ENST00000434813 ZNF215Q9UL58 517 aaPredicted RBP21.13■□□□□ 0.97
CLK1-205ENST00000434813 A0A1B0GTH6 734 aa21.12■□□□□ 0.97
CLK1-205ENST00000434813 VEGFAP15692 232 aaPredicted RBP21.12■□□□□ 0.97
CLK1-205ENST00000434813 SPATA1Q5VX52 437 aa21.12■□□□□ 0.97
CLK1-205ENST00000434813 ARL6IP4Q66PJ3 421 aaKnown RBP21.12■□□□□ 0.97
CLK1-205ENST00000434813 SLC51AQ86UW1 340 aa21.12■□□□□ 0.97
CLK1-205ENST00000434813 UPF1Q92900 1129 aaKnown RBP eCLIP21.12■□□□□ 0.97
CLK1-205ENST00000434813 TCP11L1Q9NUJ3 509 aa21.12■□□□□ 0.97
CLK1-205ENST00000434813 CGNQ9P2M7 1197 aaKnown RBP21.12■□□□□ 0.97
CLK1-205ENST00000434813 SLU7O95391 586 aaKnown RBP21.11■□□□□ 0.97
CLK1-205ENST00000434813 GNAQP50148 359 aa21.11■□□□□ 0.97
CLK1-205ENST00000434813 DIXDC1Q155Q3 683 aa21.11■□□□□ 0.97
CLK1-205ENST00000434813 PTPN21Q16825 1174 aa21.11■□□□□ 0.97
CLK1-205ENST00000434813 SLC4A8Q2Y0W8 1093 aa21.11■□□□□ 0.97
CLK1-205ENST00000434813 CERS3Q8IU89 383 aa21.11■□□□□ 0.97
CLK1-205ENST00000434813 BLIDQ8IZY5 108 aa21.11■□□□□ 0.97
CLK1-205ENST00000434813 IQUBQ8NA54 791 aa21.11■□□□□ 0.97
CLK1-205ENST00000434813 DYNLL2Q96FJ2 89 aa21.11■□□□□ 0.97
CLK1-205ENST00000434813 PHLPP2Q6ZVD8 1323 aa21.11■□□□□ 0.97
CLK1-205ENST00000434813 CDK5RAP2Q96SN8 1893 aa21.11■□□□□ 0.97
CLK1-205ENST00000434813 POLRMTO00411 1230 aaKnown RBP21.11■□□□□ 0.97
CLK1-205ENST00000434813 CD44P16070 742 aaKnown RBP21.11■□□□□ 0.97
CLK1-205ENST00000434813 ETF1P62495 437 aaKnown RBP21.11■□□□□ 0.97
CLK1-205ENST00000434813 NR1I3Q14994 352 aa21.11■□□□□ 0.97
CLK1-205ENST00000434813 CRY2Q49AN0 593 aa21.11■□□□□ 0.97
CLK1-205ENST00000434813 SYT10Q6XYQ8 523 aa21.11■□□□□ 0.97
CLK1-205ENST00000434813 FLAD1Q8NFF5 587 aa21.11■□□□□ 0.97
CLK1-205ENST00000434813 AKT1S1Q96B36 256 aa21.11■□□□□ 0.97
CLK1-205ENST00000434813 PCDHA4Q9UN74 947 aa21.11■□□□□ 0.97
CLK1-205ENST00000434813 BAZ2BQ9UIF8 2168 aaKnown RBP21.1■□□□□ 0.97
CLK1-205ENST00000434813 ADAMTS3O15072 1205 aa21.1■□□□□ 0.97
CLK1-205ENST00000434813 LDHCP07864 332 aa21.1■□□□□ 0.97
CLK1-205ENST00000434813 MCM7P33993 719 aa21.1■□□□□ 0.97
CLK1-205ENST00000434813 DDR1Q08345 913 aa21.1■□□□□ 0.97
CLK1-205ENST00000434813 GOLGA8FQ08AF8 430 aa21.1■□□□□ 0.97
CLK1-205ENST00000434813 GOLGA8DPQ0D2H9 430 aa21.1■□□□□ 0.97
CLK1-205ENST00000434813 NAA30Q147X3 362 aaPredicted RBP21.1■□□□□ 0.97
CLK1-205ENST00000434813 GRIK5Q16478 980 aa21.1■□□□□ 0.97
CLK1-205ENST00000434813 PDXDC2PQ6P474 469 aa21.1■□□□□ 0.97
CLK1-205ENST00000434813 APTXQ7Z2E3 356 aaKnown RBP21.1■□□□□ 0.97
CLK1-205ENST00000434813 TC2NQ8N9U0 490 aa21.1■□□□□ 0.97
CLK1-205ENST00000434813 RBM17Q96I25 401 aaKnown RBP21.1■□□□□ 0.97
CLK1-205ENST00000434813 MKNK2Q9HBH9 465 aa21.1■□□□□ 0.97
CLK1-205ENST00000434813 MAD2L2Q9UI95 211 aa21.1■□□□□ 0.97
CLK1-205ENST00000434813 FAM205AQ6ZU69 1335 aa21.1■□□□□ 0.97
CLK1-205ENST00000434813 ZSCAN12O43309 604 aa21.09■□□□□ 0.97
CLK1-205ENST00000434813 STX10O60499 249 aa21.09■□□□□ 0.97
CLK1-205ENST00000434813 CASP1P29466 404 aa21.09■□□□□ 0.97
CLK1-205ENST00000434813 IL17AQ16552 155 aa21.09■□□□□ 0.97
CLK1-205ENST00000434813 CDKAL1Q5VV42 579 aa21.09■□□□□ 0.97
CLK1-205ENST00000434813 NLGN1Q8N2Q7 840 aa21.09■□□□□ 0.97
CLK1-205ENST00000434813 STAG2Q8N3U4 1231 aa21.09■□□□□ 0.97
CLK1-205ENST00000434813 BAG1Q99933 345 aaPredicted RBP21.09■□□□□ 0.97
CLK1-205ENST00000434813 RTFDC1Q9BY42 306 aaPredicted RBP21.09■□□□□ 0.97
CLK1-205ENST00000434813 M0R2N6 131 aa21.09■□□□□ 0.97
CLK1-205ENST00000434813 TSPY3P0CV98 308 aa21.09■□□□□ 0.97
CLK1-205ENST00000434813 TSPY8P0CW00 308 aa21.09■□□□□ 0.97
CLK1-205ENST00000434813 LONP1P36776 959 aaKnown RBP21.09■□□□□ 0.97
CLK1-205ENST00000434813 HOMER1Q86YM7 354 aa21.09■□□□□ 0.97
CLK1-205ENST00000434813 DAGLBQ8NCG7 672 aa21.09■□□□□ 0.97
CLK1-205ENST00000434813 GPKOWQ92917 476 aaPredicted RBP eCLIP21.09■□□□□ 0.972e-12■□□□□ 8.8
CLK1-205ENST00000434813 SNED1Q8TER0 1413 aa21.08■□□□□ 0.97
CLK1-205ENST00000434813 PPP1R3GB7ZBB8 358 aa21.08■□□□□ 0.97
CLK1-205ENST00000434813 BAG6P46379 1132 aa21.08■□□□□ 0.97
CLK1-205ENST00000434813 CCDC93Q567U6 631 aa21.08■□□□□ 0.97
CLK1-205ENST00000434813 REXO1L1PQ8IX06 675 aa21.08■□□□□ 0.97
CLK1-205ENST00000434813 FAM177A1Q8N128 213 aaPredicted RBP21.08■□□□□ 0.97
CLK1-205ENST00000434813 C4orf32Q8N8J7 132 aa21.08■□□□□ 0.97
CLK1-205ENST00000434813 CCDC148Q8NFR7 591 aa21.08■□□□□ 0.97
CLK1-205ENST00000434813 TGFBRAP1Q8WUH2 860 aa21.08■□□□□ 0.97
CLK1-205ENST00000434813 USP17L3A6NCW0 530 aa21.07■□□□□ 0.96
CLK1-205ENST00000434813 USP17L4A6NCW7 530 aa21.07■□□□□ 0.96
CLK1-205ENST00000434813 GALNT17Q6IS24 598 aa21.07■□□□□ 0.96
CLK1-205ENST00000434813 KLHL10Q6JEL2 608 aa21.07■□□□□ 0.96
CLK1-205ENST00000434813 USP17L1Q7RTZ2 530 aa21.07■□□□□ 0.96
CLK1-205ENST00000434813 GTPBP6O43824 516 aaPredicted RBP21.07■□□□□ 0.96
CLK1-205ENST00000434813 GPSM2P81274 684 aa21.07■□□□□ 0.96
CLK1-205ENST00000434813 TYW1BQ6NUM6 668 aa21.07■□□□□ 0.96
CLK1-205ENST00000434813 TRIM65Q6PJ69 517 aa21.07■□□□□ 0.96
CLK1-205ENST00000434813 COL23A1Q86Y22 540 aaPredicted RBP21.07■□□□□ 0.96
CLK1-205ENST00000434813 CTAGE1Q96RT6 745 aa21.07■□□□□ 0.96
CLK1-205ENST00000434813 PPP2R2CQ9Y2T4 447 aa21.07■□□□□ 0.96
CLK1-205ENST00000434813 GOLGA6L9A6NEM1 432 aa21.06■□□□□ 0.96
CLK1-205ENST00000434813 RASA1P20936 1047 aa21.06■□□□□ 0.96
CLK1-205ENST00000434813 SLC35G1Q2M3R5 365 aa21.06■□□□□ 0.96
CLK1-205ENST00000434813 ZNF444Q8N0Y2 327 aaPredicted RBP21.06■□□□□ 0.96
CLK1-205ENST00000434813 SLC44A5Q8NCS7 719 aa21.06■□□□□ 0.96
CLK1-205ENST00000434813 GPR101Q96P66 508 aaPredicted RBP21.06■□□□□ 0.96
CLK1-205ENST00000434813 ZNF287Q9HBT7 754 aa21.06■□□□□ 0.96
CLK1-205ENST00000434813 PALM3A6NDB9 673 aaPredicted RBP21.05■□□□□ 0.96
CLK1-205ENST00000434813 TXLNAP40222 546 aa21.05■□□□□ 0.96
CLK1-205ENST00000434813 WWC2Q6AWC2 1192 aa21.05■□□□□ 0.96
CLK1-205ENST00000434813 MAPKAPK5Q8IW41 473 aa21.05■□□□□ 0.96
CLK1-205ENST00000434813 SMYD4Q8IYR2 804 aaPredicted RBP21.05■□□□□ 0.96
CLK1-205ENST00000434813 FEZ1Q99689 392 aa21.05■□□□□ 0.96
CLK1-205ENST00000434813 MTRQ99707 1265 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms