RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 ZSCAN25Q6NSZ9 544 aa16.11■□□□□ 0.17
CDC42EP1-204ENST00000434728 MAML3Q96JK9 1138 aa16.11■□□□□ 0.17
CDC42EP1-204ENST00000434728 CHMP4BQ9H444 224 aaKnown RBP16.11■□□□□ 0.17
CDC42EP1-204ENST00000434728 MYH7P12883 1935 aa16.11■□□□□ 0.17
CDC42EP1-204ENST00000434728 ZNFX1Q9P2E3 1918 aaKnown RBP16.11■□□□□ 0.17
CDC42EP1-204ENST00000434728 COL11A1P12107 1806 aaPredicted RBP16.1■□□□□ 0.17
CDC42EP1-204ENST00000434728 LTBP2Q14767 1821 aa16.1■□□□□ 0.17
CDC42EP1-204ENST00000434728 USP17L12C9JPN9 530 aa16.1■□□□□ 0.17
CDC42EP1-204ENST00000434728 USP17L21D6R901 530 aa16.1■□□□□ 0.17
CDC42EP1-204ENST00000434728 CDK8P49336 464 aa16.1■□□□□ 0.17
CDC42EP1-204ENST00000434728 FAM47AQ5JRC9 791 aa16.1■□□□□ 0.17
CDC42EP1-204ENST00000434728 KIAA1755Q5JYT7 1200 aa16.1■□□□□ 0.17
CDC42EP1-204ENST00000434728 KANSL2Q9H9L4 492 aa16.1■□□□□ 0.17
CDC42EP1-204ENST00000434728 XPNPEP3Q9NQH7 507 aa16.1■□□□□ 0.17
CDC42EP1-204ENST00000434728 SLC4A4Q9Y6R1 1079 aa16.1■□□□□ 0.17
CDC42EP1-204ENST00000434728 UNC80Q8N2C7 3258 aa16.09■□□□□ 0.17
CDC42EP1-204ENST00000434728 CYP2D7A0A087X1C5 515 aa16.09■□□□□ 0.17
CDC42EP1-204ENST00000434728 EEF2P13639 858 aaKnown RBP16.09■□□□□ 0.17
CDC42EP1-204ENST00000434728 TMEM132BQ14DG7 1078 aa16.09■□□□□ 0.17
CDC42EP1-204ENST00000434728 LRRC41Q15345 812 aa16.09■□□□□ 0.17
CDC42EP1-204ENST00000434728 FAM109BQ6ICB4 259 aaPredicted RBP16.09■□□□□ 0.17
CDC42EP1-204ENST00000434728 RNF180Q86T96 592 aa16.09■□□□□ 0.17
CDC42EP1-204ENST00000434728 CNPY2Q9Y2B0 182 aa16.09■□□□□ 0.17
CDC42EP1-204ENST00000434728 COG6Q9Y2V7 657 aa16.09■□□□□ 0.17
CDC42EP1-204ENST00000434728 CTDP1Q9Y5B0 961 aaPredicted RBP16.09■□□□□ 0.17
CDC42EP1-204ENST00000434728 PARP14Q460N5 1801 aa16.08■□□□□ 0.17
CDC42EP1-204ENST00000434728 PLXNA1Q9UIW2 1896 aa16.08■□□□□ 0.17
CDC42EP1-204ENST00000434728 PGK2P07205 417 aa16.08■□□□□ 0.16
CDC42EP1-204ENST00000434728 ATP5JP18859 108 aa16.08■□□□□ 0.16
CDC42EP1-204ENST00000434728 COPB2P35606 906 aa16.08■□□□□ 0.16
CDC42EP1-204ENST00000434728 SLFNL1Q499Z3 407 aa16.08■□□□□ 0.16
CDC42EP1-204ENST00000434728 C12orf60Q5U649 245 aa16.08■□□□□ 0.16
CDC42EP1-204ENST00000434728 C16orf86Q6ZW13 317 aa16.08■□□□□ 0.16
CDC42EP1-204ENST00000434728 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.08■□□□□ 0.16
CDC42EP1-204ENST00000434728 BADQ92934 168 aa16.08■□□□□ 0.16
CDC42EP1-204ENST00000434728 SMCHD1A6NHR9 2005 aa16.07■□□□□ 0.16
CDC42EP1-204ENST00000434728 POTEB2H3BUK9 544 aa16.07■□□□□ 0.16
CDC42EP1-204ENST00000434728 STAT3P40763 770 aa16.07■□□□□ 0.16
CDC42EP1-204ENST00000434728 SLC4A3P48751 1232 aa16.07■□□□□ 0.16
CDC42EP1-204ENST00000434728 SHHQ15465 462 aa16.07■□□□□ 0.16
CDC42EP1-204ENST00000434728 FAM83BQ5T0W9 1011 aa16.07■□□□□ 0.16
CDC42EP1-204ENST00000434728 HAUS7Q99871 368 aa16.07■□□□□ 0.16
CDC42EP1-204ENST00000434728 PDLIM7Q9NR12 457 aa16.07■□□□□ 0.16
CDC42EP1-204ENST00000434728 FBXO28Q9NVF7 368 aa16.07■□□□□ 0.16
CDC42EP1-204ENST00000434728 ARPP21Q9UBL0 812 aaPredicted RBP16.07■□□□□ 0.16
CDC42EP1-204ENST00000434728 NRBP1Q9UHY1 535 aa16.07■□□□□ 0.16
CDC42EP1-204ENST00000434728 VWA5AO00534 786 aa16.06■□□□□ 0.16
CDC42EP1-204ENST00000434728 PGK1P00558 417 aa16.06■□□□□ 0.16
CDC42EP1-204ENST00000434728 IGHA2P01877 340 aa16.06■□□□□ 0.16
CDC42EP1-204ENST00000434728 UBE3CQ15386 1083 aa16.06■□□□□ 0.16
CDC42EP1-204ENST00000434728 RIOX2Q8IUF8 465 aa16.06■□□□□ 0.16
CDC42EP1-204ENST00000434728 SIAH1Q8IUQ4 282 aa16.06■□□□□ 0.16
CDC42EP1-204ENST00000434728 STK11IPQ8N1F8 1099 aa16.06■□□□□ 0.16
CDC42EP1-204ENST00000434728 DDX11Q96FC9 970 aa16.06■□□□□ 0.16
CDC42EP1-204ENST00000434728 GUCD1Q96NT3 240 aa16.06■□□□□ 0.16
CDC42EP1-204ENST00000434728 TINF2Q9BSI4 451 aa16.06■□□□□ 0.16
CDC42EP1-204ENST00000434728 LRRCC1Q9C099 1032 aa16.06■□□□□ 0.16
CDC42EP1-204ENST00000434728 MKNK2Q9HBH9 465 aa16.06■□□□□ 0.16
CDC42EP1-204ENST00000434728 PPP1R9AQ9ULJ8 1098 aa16.06■□□□□ 0.16
CDC42EP1-204ENST00000434728 PQBP1O60828 265 aaKnown RBP16.05■□□□□ 0.16
CDC42EP1-204ENST00000434728 CLTBP09497 229 aa16.05■□□□□ 0.16
CDC42EP1-204ENST00000434728 AKR1A1P14550 325 aa16.05■□□□□ 0.16
CDC42EP1-204ENST00000434728 RAG1P15918 1043 aa16.05■□□□□ 0.16
CDC42EP1-204ENST00000434728 TLE2Q04725 743 aa16.05■□□□□ 0.16
CDC42EP1-204ENST00000434728 SNX17Q15036 470 aa16.05■□□□□ 0.16
CDC42EP1-204ENST00000434728 C9orf50Q5SZB4 431 aa16.05■□□□□ 0.16
CDC42EP1-204ENST00000434728 CTR9Q6PD62 1173 aa16.05■□□□□ 0.16
CDC42EP1-204ENST00000434728 ZBTB40Q9NUA8 1239 aa16.05■□□□□ 0.16
CDC42EP1-204ENST00000434728 TACC3Q9Y6A5 838 aa16.05■□□□□ 0.16
CDC42EP1-204ENST00000434728 SNRNP48Q6IEG0 339 aaKnown RBP16.04■□□□□ 0.16
CDC42EP1-204ENST00000434728 SH3RF1Q7Z6J0 888 aa16.04■□□□□ 0.16
CDC42EP1-204ENST00000434728 SIRT2Q8IXJ6 389 aa16.04■□□□□ 0.16
CDC42EP1-204ENST00000434728 GPATCH3Q96I76 525 aa16.04■□□□□ 0.16
CDC42EP1-204ENST00000434728 RNPC3Q96LT9 517 aaKnown RBP16.04■□□□□ 0.16
CDC42EP1-204ENST00000434728 SLF1Q9BQI6 1058 aa16.04■□□□□ 0.16
CDC42EP1-204ENST00000434728 TEX13BQ9BXU2 312 aa16.04■□□□□ 0.16
CDC42EP1-204ENST00000434728 ISY1Q9ULR0 285 aaKnown RBP16.04■□□□□ 0.16
CDC42EP1-204ENST00000434728 PHF24Q9UPV7 400 aa16.04■□□□□ 0.16
CDC42EP1-204ENST00000434728 DIS3Q9Y2L1 958 aaKnown RBP16.04■□□□□ 0.16
CDC42EP1-204ENST00000434728 A0A1W2PQ45 241 aaPredicted RBP16.03■□□□□ 0.16
CDC42EP1-204ENST00000434728 A0A1W2PQY0 241 aa16.03■□□□□ 0.16
CDC42EP1-204ENST00000434728 TRIM43BA6NCK2 446 aa16.03■□□□□ 0.16
CDC42EP1-204ENST00000434728 MINDY4BA8MYZ0 360 aa16.03■□□□□ 0.16
CDC42EP1-204ENST00000434728 SMIM22K7EJ46 135 aa16.03■□□□□ 0.16
CDC42EP1-204ENST00000434728 C1orf53Q5VUE5 145 aa16.03■□□□□ 0.16
CDC42EP1-204ENST00000434728 NUP133Q8WUM0 1156 aa16.03■□□□□ 0.16
CDC42EP1-204ENST00000434728 TRIM43Q96BQ3 446 aaPredicted RBP16.03■□□□□ 0.16
CDC42EP1-204ENST00000434728 NUP88Q99567 741 aaPredicted RBP16.03■□□□□ 0.16
CDC42EP1-204ENST00000434728 CDX2Q99626 313 aaPredicted RBP16.03■□□□□ 0.16
CDC42EP1-204ENST00000434728 PUS7LQ9H0K6 701 aaKnown RBP16.03■□□□□ 0.16
CDC42EP1-204ENST00000434728 ZNF287Q9HBT7 754 aa16.03■□□□□ 0.16
CDC42EP1-204ENST00000434728 TMEM39AQ9NV64 488 aa16.03■□□□□ 0.16
CDC42EP1-204ENST00000434728 ZHX1Q9UKY1 873 aaPredicted RBP16.03■□□□□ 0.16
CDC42EP1-204ENST00000434728 DCDC2CA8MYV0 355 aa16.02■□□□□ 0.16
CDC42EP1-204ENST00000434728 ZBED4O75132 1171 aa16.02■□□□□ 0.16
CDC42EP1-204ENST00000434728 CHGBP05060 677 aa16.02■□□□□ 0.16
CDC42EP1-204ENST00000434728 APPP05067 770 aa16.02■□□□□ 0.16
CDC42EP1-204ENST00000434728 TAL1P17542 331 aaPredicted RBP16.02■□□□□ 0.16
CDC42EP1-204ENST00000434728 TDO2P48775 406 aa16.02■□□□□ 0.16
CDC42EP1-204ENST00000434728 SMAD3P84022 425 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms