RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 MFSD4AQ8N468 514 aa8.61□□□□□ -1.03
HDAC9-213ENST00000433709 RBBP8NLQ8NC74 664 aaPredicted RBP8.61□□□□□ -1.03
HDAC9-213ENST00000433709 SRRTQ9BXP5 876 aaKnown RBP8.61□□□□□ -1.03
HDAC9-213ENST00000433709 TNKS2Q9H2K2 1166 aa8.61□□□□□ -1.03
HDAC9-213ENST00000433709 ADGRL1O94910 1474 aa8.61□□□□□ -1.03
HDAC9-213ENST00000433709 FANCAO15360 1455 aa8.6□□□□□ -1.03
HDAC9-213ENST00000433709 DENND4BO75064 1496 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-213ENST00000433709 ARHGAP35Q9NRY4 1499 aa8.6□□□□□ -1.03
HDAC9-213ENST00000433709 FAM155AB1AL88 458 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-213ENST00000433709 TNFRSF10CO14798 259 aa8.6□□□□□ -1.03
HDAC9-213ENST00000433709 EIF6P56537 245 aaKnown RBP8.6□□□□□ -1.03
HDAC9-213ENST00000433709 BNIP3Q12983 259 aa8.6□□□□□ -1.03
HDAC9-213ENST00000433709 CDKAL1Q5VV42 579 aa8.6□□□□□ -1.03
HDAC9-213ENST00000433709 C22orf34Q6ZV56 151 aa8.6□□□□□ -1.03
HDAC9-213ENST00000433709 VPS37DQ86XT2 251 aa8.6□□□□□ -1.03
HDAC9-213ENST00000433709 CPLX3Q8WVH0 158 aa8.6□□□□□ -1.03
HDAC9-213ENST00000433709 Q96M66 194 aa8.6□□□□□ -1.03
HDAC9-213ENST00000433709 CRBNQ96SW2 442 aa8.6□□□□□ -1.03
HDAC9-213ENST00000433709 CCDC39Q9UFE4 941 aa8.6□□□□□ -1.03
HDAC9-213ENST00000433709 CCDC18Q5T9S5 1454 aa8.59□□□□□ -1.03
HDAC9-213ENST00000433709 MAGI2Q86UL8 1455 aa8.59□□□□□ -1.03
HDAC9-213ENST00000433709 TMEM265A0A087WTH1 108 aa8.59□□□□□ -1.03
HDAC9-213ENST00000433709 PRNPP04156 253 aa8.59□□□□□ -1.03
HDAC9-213ENST00000433709 KIR3DL1P43629 444 aa8.59□□□□□ -1.03
HDAC9-213ENST00000433709 GIPRP48546 466 aa8.59□□□□□ -1.03
HDAC9-213ENST00000433709 TNK2Q07912 1038 aa8.59□□□□□ -1.03
HDAC9-213ENST00000433709 NFXL1Q6ZNB6 911 aa8.59□□□□□ -1.03
HDAC9-213ENST00000433709 TMEM192Q8IY95 271 aa8.59□□□□□ -1.03
HDAC9-213ENST00000433709 BCL7CQ8WUZ0 217 aaPredicted RBP8.59□□□□□ -1.03
HDAC9-213ENST00000433709 SHDQ96IW2 340 aa8.59□□□□□ -1.03
HDAC9-213ENST00000433709 PLCH2O75038 1416 aa8.59□□□□□ -1.03
HDAC9-213ENST00000433709 POGZQ7Z3K3 1410 aa8.59□□□□□ -1.03
HDAC9-213ENST00000433709 AKNAQ7Z591 1439 aa8.59□□□□□ -1.03
HDAC9-213ENST00000433709 CD96P40200 585 aa8.58□□□□□ -1.04
HDAC9-213ENST00000433709 CHMP4BP1P59074 171 aa8.58□□□□□ -1.04
HDAC9-213ENST00000433709 ZYXQ15942 572 aaKnown RBP8.58□□□□□ -1.04
HDAC9-213ENST00000433709 AOC3Q16853 763 aa8.58□□□□□ -1.04
HDAC9-213ENST00000433709 INTS3Q68E01 1043 aaKnown RBP8.58□□□□□ -1.04
HDAC9-213ENST00000433709 RNF141Q8WVD5 230 aa8.58□□□□□ -1.04
HDAC9-213ENST00000433709 VWCEQ96DN2 955 aa8.58□□□□□ -1.04
HDAC9-213ENST00000433709 COX4I2Q96KJ9 171 aa8.58□□□□□ -1.04
HDAC9-213ENST00000433709 HSPA12BQ96MM6 686 aa8.58□□□□□ -1.04
HDAC9-213ENST00000433709 TM9SF2Q99805 663 aa8.58□□□□□ -1.04
HDAC9-213ENST00000433709 ST14Q9Y5Y6 855 aa8.58□□□□□ -1.04
HDAC9-213ENST00000433709 ARID4BQ4LE39 1312 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-213ENST00000433709 TROQ12816 1431 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-213ENST00000433709 CASKIN1Q8WXD9 1431 aa8.57□□□□□ -1.04
HDAC9-213ENST00000433709 RAPGEF3O95398 923 aa8.57□□□□□ -1.04
HDAC9-213ENST00000433709 ZC3H6P61129 1189 aaKnown RBP8.57□□□□□ -1.04
HDAC9-213ENST00000433709 SPRED2Q7Z698 418 aa8.57□□□□□ -1.04
HDAC9-213ENST00000433709 ZNF512BQ96KM6 892 aaPredicted RBP8.57□□□□□ -1.04
HDAC9-213ENST00000433709 HRASLS5Q96KN8 279 aa8.57□□□□□ -1.04
HDAC9-213ENST00000433709 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.57□□□□□ -1.04
HDAC9-213ENST00000433709 SNX11Q9Y5W9 270 aa8.57□□□□□ -1.04
HDAC9-213ENST00000433709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.57□□□□□ -1.04
HDAC9-213ENST00000433709 WNT11O96014 354 aa8.56□□□□□ -1.04
HDAC9-213ENST00000433709 GUCY2CP25092 1073 aa8.56□□□□□ -1.04
HDAC9-213ENST00000433709 DNAJA1P31689 397 aaKnown RBP8.56□□□□□ -1.04
HDAC9-213ENST00000433709 CCNFP41002 786 aa8.56□□□□□ -1.04
HDAC9-213ENST00000433709 CLCN7P51798 805 aa8.56□□□□□ -1.04
HDAC9-213ENST00000433709 ARID5AQ03989 594 aa8.56□□□□□ -1.04
HDAC9-213ENST00000433709 PRKCQQ04759 706 aa8.56□□□□□ -1.04
HDAC9-213ENST00000433709 NAALADL2Q58DX5 795 aa8.56□□□□□ -1.04
HDAC9-213ENST00000433709 ZNF574Q6ZN55 896 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-213ENST00000433709 VSIG10LQ86VR7 867 aa8.56□□□□□ -1.04
HDAC9-213ENST00000433709 TAB3Q8N5C8 712 aaPredicted RBP8.56□□□□□ -1.04
HDAC9-213ENST00000433709 DTWD2Q8NBA8 298 aa8.56□□□□□ -1.04
HDAC9-213ENST00000433709 SLC43A3Q8NBI5 491 aa8.56□□□□□ -1.04
HDAC9-213ENST00000433709 ANAPC16Q96DE5 110 aa8.56□□□□□ -1.04
HDAC9-213ENST00000433709 FBXL18Q96ME1 805 aa8.56□□□□□ -1.04
HDAC9-213ENST00000433709 SLC6A18Q96N87 628 aa8.56□□□□□ -1.04
HDAC9-213ENST00000433709 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.56□□□□□ -1.04
HDAC9-213ENST00000433709 ASPNQ9BXN1 380 aa8.56□□□□□ -1.04
HDAC9-213ENST00000433709 VAV3Q9UKW4 847 aa8.56□□□□□ -1.04
HDAC9-213ENST00000433709 ANGEL1Q9UNK9 670 aaKnown RBP8.56□□□□□ -1.04
HDAC9-213ENST00000433709 SLC5A6Q9Y289 635 aa8.56□□□□□ -1.04
HDAC9-213ENST00000433709 MRVI1Q9Y6F6 885 aa8.56□□□□□ -1.04
HDAC9-213ENST00000433709 KIF14Q15058 1648 aa8.55□□□□□ -1.04
HDAC9-213ENST00000433709 H3BS24 57 aa8.55□□□□□ -1.04
HDAC9-213ENST00000433709 CLEC3AO75596 197 aa8.55□□□□□ -1.04
HDAC9-213ENST00000433709 NBPF12Q5TAG4 269 aaPredicted RBP8.55□□□□□ -1.04
HDAC9-213ENST00000433709 UNC5AQ6ZN44 842 aa8.55□□□□□ -1.04
HDAC9-213ENST00000433709 WFDC3Q8IUB2 231 aa8.55□□□□□ -1.04
HDAC9-213ENST00000433709 FAM169BQ8N8A8 192 aa8.55□□□□□ -1.04
HDAC9-213ENST00000433709 FLCNQ8NFG4 579 aa8.55□□□□□ -1.04
HDAC9-213ENST00000433709 PIWIL2Q8TC59 973 aaKnown RBP8.55□□□□□ -1.04
HDAC9-213ENST00000433709 MISP3Q96FF7 219 aa8.55□□□□□ -1.04
HDAC9-213ENST00000433709 SEMA3GQ9NS98 782 aa8.55□□□□□ -1.04
HDAC9-213ENST00000433709 STRIP2Q9ULQ0 834 aa8.55□□□□□ -1.04
HDAC9-213ENST00000433709 PITPNM2Q9BZ72 1349 aa8.54□□□□□ -1.04
HDAC9-213ENST00000433709 FYCO1Q9BQS8 1478 aa8.54□□□□□ -1.04
HDAC9-213ENST00000433709 WASH4PA8MWX3 477 aa8.54□□□□□ -1.04
HDAC9-213ENST00000433709 FGRP09769 529 aa8.54□□□□□ -1.04
HDAC9-213ENST00000433709 CD8BP10966 210 aa8.54□□□□□ -1.04
HDAC9-213ENST00000433709 TTC6Q86TZ1 520 aa8.54□□□□□ -1.04
HDAC9-213ENST00000433709 MCF2L2Q86YR7 1114 aa8.54□□□□□ -1.04
HDAC9-213ENST00000433709 STK11IPQ8N1F8 1099 aa8.54□□□□□ -1.04
HDAC9-213ENST00000433709 UBE2FQ969M7 185 aa8.54□□□□□ -1.04
HDAC9-213ENST00000433709 ATP13A1Q9HD20 1204 aa8.54□□□□□ -1.04
HDAC9-213ENST00000433709 PAK6Q9NQU5 681 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms