RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 RNF111Q6ZNA4 994 aa5.49□□□□□ -1.53
LINC01239-201ENST00000433645 FLAD1Q8NFF5 587 aa5.49□□□□□ -1.53
LINC01239-201ENST00000433645 ALPK1Q96QP1 1244 aa5.49□□□□□ -1.53
LINC01239-201ENST00000433645 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.49□□□□□ -1.53
LINC01239-201ENST00000433645 PRDM14Q9GZV8 571 aa5.49□□□□□ -1.53
LINC01239-201ENST00000433645 CARS2Q9HA77 564 aaKnown RBP5.49□□□□□ -1.53
LINC01239-201ENST00000433645 DUSP13Q9UII6 198 aa5.49□□□□□ -1.53
LINC01239-201ENST00000433645 ZNF281Q9Y2X9 895 aa5.49□□□□□ -1.53
LINC01239-201ENST00000433645 LTBP3Q9NS15 1303 aa5.48□□□□□ -1.53
LINC01239-201ENST00000433645 SHISA3A0PJX4 238 aa5.48□□□□□ -1.53
LINC01239-201ENST00000433645 CCDC144CPQ8IYA2 1237 aa5.48□□□□□ -1.53
LINC01239-201ENST00000433645 LINC00116Q8NCU8 138 aa5.48□□□□□ -1.53
LINC01239-201ENST00000433645 PRKAG3Q9UGI9 489 aa5.48□□□□□ -1.53
LINC01239-201ENST00000433645 ADAMTS6Q9UKP5 1117 aa5.48□□□□□ -1.53
LINC01239-201ENST00000433645 C9IYK1 514 aa5.47□□□□□ -1.53
LINC01239-201ENST00000433645 SHOXO15266 292 aa5.47□□□□□ -1.53
LINC01239-201ENST00000433645 GDNFP39905 211 aa5.47□□□□□ -1.53
LINC01239-201ENST00000433645 ZNF143P52747 638 aaPredicted RBP5.47□□□□□ -1.53
LINC01239-201ENST00000433645 SLC7A5Q01650 507 aa5.47□□□□□ -1.53
LINC01239-201ENST00000433645 EGR3Q06889 387 aa5.47□□□□□ -1.53
LINC01239-201ENST00000433645 MCTP1Q6DN14 999 aa5.47□□□□□ -1.53
LINC01239-201ENST00000433645 PPFIBP1Q86W92 1011 aa5.47□□□□□ -1.53
LINC01239-201ENST00000433645 MCF2L2Q86YR7 1114 aa5.47□□□□□ -1.53
LINC01239-201ENST00000433645 CREG2Q8IUH2 290 aa5.47□□□□□ -1.53
LINC01239-201ENST00000433645 FAM169BQ8N8A8 192 aa5.47□□□□□ -1.53
LINC01239-201ENST00000433645 DHX38Q92620 1227 aaKnown RBP5.47□□□□□ -1.53
LINC01239-201ENST00000433645 SYTL4Q96C24 671 aaPredicted RBP5.47□□□□□ -1.53
LINC01239-201ENST00000433645 TCTN2Q96GX1 697 aa5.47□□□□□ -1.53
LINC01239-201ENST00000433645 ZNF512BQ96KM6 892 aaPredicted RBP5.47□□□□□ -1.53
LINC01239-201ENST00000433645 RC3H2Q9HBD1 1191 aaKnown RBP5.47□□□□□ -1.53
LINC01239-201ENST00000433645 CHST7Q9NS84 486 aa5.47□□□□□ -1.53
LINC01239-201ENST00000433645 PRAMEF1O95521 474 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 GSNP06396 782 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 CD247P20963 164 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 LTKP29376 864 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 BMP8BP34820 402 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 PCBP3P57721 371 aaKnown RBP5.46□□□□□ -1.54
LINC01239-201ENST00000433645 TEKQ02763 1124 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 SNW1Q13573 536 aaKnown RBP5.46□□□□□ -1.54
LINC01239-201ENST00000433645 NCAPHQ15003 741 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 TCEAL1Q15170 157 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 NAALADL2Q58DX5 795 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 AXDND1Q5T1B0 1012 aaPredicted RBP5.46□□□□□ -1.54
LINC01239-201ENST00000433645 TMC3Q7Z5M5 1100 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 LRRN4CLQ8ND94 238 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 ARMC5Q96C12 935 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 ANAPC16Q96DE5 110 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 WHRNQ9P202 907 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 TMEM59LQ9UK28 342 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 FBXL21Q9UKT6 434 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 CTNND2Q9UQB3 1225 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 PCDHA11Q9Y5I1 949 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 FHOD1Q9Y613 1164 aa5.46□□□□□ -1.54
LINC01239-201ENST00000433645 WASH4PA8MWX3 477 aa5.45□□□□□ -1.54
LINC01239-201ENST00000433645 NAT2P11245 290 aa5.45□□□□□ -1.54
LINC01239-201ENST00000433645 DNAJA1P31689 397 aaKnown RBP5.45□□□□□ -1.54
LINC01239-201ENST00000433645 AFMP43652 599 aa5.45□□□□□ -1.54
LINC01239-201ENST00000433645 DUSP4Q13115 394 aa5.45□□□□□ -1.54
LINC01239-201ENST00000433645 NR0B2Q15466 257 aa5.45□□□□□ -1.54
LINC01239-201ENST00000433645 PPP2R5EQ16537 467 aa5.45□□□□□ -1.54
LINC01239-201ENST00000433645 GNPTABQ3T906 1256 aa5.45□□□□□ -1.54
LINC01239-201ENST00000433645 USHBP1Q8N6Y0 703 aa5.45□□□□□ -1.54
LINC01239-201ENST00000433645 KLHL6Q8WZ60 621 aa5.45□□□□□ -1.54
LINC01239-201ENST00000433645 HAUS7Q99871 368 aa5.45□□□□□ -1.54
LINC01239-201ENST00000433645 GBP3Q9H0R5 595 aa5.45□□□□□ -1.54
LINC01239-201ENST00000433645 GP6Q9HCN6 339 aa5.45□□□□□ -1.54
LINC01239-201ENST00000433645 ACTR10Q9NZ32 417 aa5.45□□□□□ -1.54
LINC01239-201ENST00000433645 DIS3Q9Y2L1 958 aaKnown RBP5.45□□□□□ -1.54
LINC01239-201ENST00000433645 CBFA2T2O43439 604 aa5.44□□□□□ -1.54
LINC01239-201ENST00000433645 ITGA4P13612 1032 aa5.44□□□□□ -1.54
LINC01239-201ENST00000433645 TAL1P17542 331 aaPredicted RBP5.44□□□□□ -1.54
LINC01239-201ENST00000433645 ZNF445P59923 1031 aa5.44□□□□□ -1.54
LINC01239-201ENST00000433645 NOL9Q5SY16 702 aaKnown RBP5.44□□□□□ -1.54
LINC01239-201ENST00000433645 VHLLQ6RSH7 139 aa5.44□□□□□ -1.54
LINC01239-201ENST00000433645 PDZD8Q8NEN9 1154 aa5.44□□□□□ -1.54
LINC01239-201ENST00000433645 ASIC4Q96FT7 647 aa5.44□□□□□ -1.54
LINC01239-201ENST00000433645 RCC1LQ96I51 464 aaKnown RBP5.44□□□□□ -1.54
LINC01239-201ENST00000433645 KLHL25Q9H0H3 589 aa5.44□□□□□ -1.54
LINC01239-201ENST00000433645 ZNF408Q9H9D4 720 aa5.44□□□□□ -1.54
LINC01239-201ENST00000433645 C19orf73Q9NVV2 129 aa5.44□□□□□ -1.54
LINC01239-201ENST00000433645 GFOD1Q9NXC2 390 aa5.44□□□□□ -1.54
LINC01239-201ENST00000433645 TCFL5Q9UL49 500 aa5.44□□□□□ -1.54
LINC01239-201ENST00000433645 SF3B6Q9Y3B4 125 aaKnown RBP5.44□□□□□ -1.54
LINC01239-201ENST00000433645 ANKRD34BA5PLL1 514 aa5.43□□□□□ -1.54
LINC01239-201ENST00000433645 FAM86C2PA6NEL3 165 aa5.43□□□□□ -1.54
LINC01239-201ENST00000433645 RBAK-RBAKDNI3L0D1 243 aa5.43□□□□□ -1.54
LINC01239-201ENST00000433645 SMAD7O15105 426 aaKnown RBP5.43□□□□□ -1.54
LINC01239-201ENST00000433645 ZNF205O95201 554 aa5.43□□□□□ -1.54
LINC01239-201ENST00000433645 PAPLNO95428 1278 aa5.43□□□□□ -1.54
LINC01239-201ENST00000433645 HPXP02790 462 aa5.43□□□□□ -1.54
LINC01239-201ENST00000433645 ZGLP1P0C6A0 271 aa5.43□□□□□ -1.54
LINC01239-201ENST00000433645 RAC2P15153 192 aa5.43□□□□□ -1.54
LINC01239-201ENST00000433645 ETFBP38117 255 aa5.43□□□□□ -1.54
LINC01239-201ENST00000433645 KIR2DL1P43626 348 aaPredicted RBP5.43□□□□□ -1.54
LINC01239-201ENST00000433645 KIR2DL2P43627 348 aaPredicted RBP5.43□□□□□ -1.54
LINC01239-201ENST00000433645 RBM10P98175 930 aaKnown RBP5.43□□□□□ -1.54
LINC01239-201ENST00000433645 CHRNEQ04844 493 aa5.43□□□□□ -1.54
LINC01239-201ENST00000433645 FXNQ16595 210 aa5.43□□□□□ -1.54
LINC01239-201ENST00000433645 TDRD10Q5VZ19 366 aaKnown RBP5.43□□□□□ -1.54
LINC01239-201ENST00000433645 DCAF15Q66K64 600 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms