RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 ETF1P62495 437 aaKnown RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 NONOQ15233 471 aaKnown RBP eCLIP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 RNF216Q9NWF9 866 aaPredicted RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 STAM2O75886 525 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 CNGA1P29973 690 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 SF3B3Q15393 1217 aaKnown RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 NBPF14Q5TI25 921 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 RUFY4Q6ZNE9 571 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 TANGO6Q9C0B7 1094 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 GZF1Q9H116 711 aaPredicted RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 NARFQ9UHQ1 456 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 DYTNA2CJ06 578 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 CSF1RP07333 972 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 PAX3P23760 479 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 CDC42EP1Q00587 391 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 EAF2Q96CJ1 260 aaPredicted RBP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 SHTN1A0MZ66 631 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 GRID2IPA4D2P6 1211 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 EVI5O60447 810 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 KIAA0754O94854 1291 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 GAS8O95995 478 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 FKBP4Q02790 459 aaKnown RBP eCLIP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 USP48Q86UV5 1035 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 TSPYL6Q8N831 410 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 C1orf131Q8NDD1 294 aaKnown RBP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 SLC16A10Q8TF71 515 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 THAP9Q9H5L6 903 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 CABP5Q9NP86 173 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 DDX25Q9UHL0 483 aaKnown RBP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 INTUQ9ULD6 942 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 ATXN2Q99700 1313 aaKnown RBP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 PITPNM2Q9BZ72 1349 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 PARP1P09874 1014 aaKnown RBP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 NF2P35240 595 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 AP3M2P53677 418 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 KIF5AQ12840 1032 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 DZIP3Q86Y13 1208 aaKnown RBP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 OGFOD1Q8N543 542 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 RTN4Q9NQC3 1192 aaKnown RBP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 MAFGO15525 162 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 SCG2P13521 617 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 EFCAB13Q8IY85 973 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 TBC1D5Q92609 795 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 TSPAN18Q96SJ8 248 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 SPDYE3A6NKU9 549 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 MAPK13O15264 365 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 USP14P54578 494 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 NLRP12P59046 1061 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 RPS8P62241 208 aaKnown RBP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 RNASELQ05823 741 aaKnown RBP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 NNTQ13423 1086 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 SMC1AQ14683 1233 aaKnown RBP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 HDXQ7Z353 690 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 MB21D2Q8IYB1 491 aaPredicted RBP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 MYD88Q99836 296 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 ARHGEF10LQ9HCE6 1279 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 WWC3Q9ULE0 1092 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 BUB1BO60566 1050 aaPredicted RBP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 ITGA6P23229 1130 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 MTA1Q13330 715 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 MCF2L2Q86YR7 1114 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 ZNF34Q8IZ26 560 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 WHAMMQ8TF30 809 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 DCAF4Q8WV16 495 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 XAGE2Q96GT9 111 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 ALG1Q9BT22 464 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 THUMPD2Q9BTF0 503 aaKnown RBP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 COL24A1Q17RW2 1714 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 FAM83GA6ND36 823 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 STAT6P42226 847 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 EIF5P55010 431 aaKnown RBP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 KRBA2Q6ZNG9 492 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 BRINP3Q76B58 766 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 FAXDC2Q96IV6 333 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 SELENOOQ9BVL4 669 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 C17orf75Q9HAS0 396 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 TUBE1Q9UJT0 475 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 MAGEB6P1A0A0J9YX57 407 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 HOXB6P17509 224 aaKnown RBP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 EXOSC10Q01780 885 aaKnown RBP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 ZNF772Q68DY9 489 aaPredicted RBP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 FANCBQ8NB91 859 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 CCDC102AQ96A19 550 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 GDAP1L1Q96MZ0 367 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 ANKIB1Q9P2G1 1089 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 CTDP1Q9Y5B0 961 aaPredicted RBP4.2□□□□□ -1.74
SHPRH-205ENST00000433355 CCDC188H7C350 402 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 SOX12O15370 315 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 MMP1P03956 469 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 FGRP09769 529 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 MICAL3Q7RTP6 2002 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 UBL4BQ8N7F7 174 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 NOX5Q96PH1 765 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 PPP1R2P1Q96PQ5 205 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 CCSER1Q9C0I3 900 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 SLX4Q8IY92 1834 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 NHSQ6T4R5 1651 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 ZNF804BA4D1E1 1349 aa4.2□□□□□ -1.74
SHPRH-205ENST00000433355 HNRNPCL1O60812 293 aaKnown RBP4.19□□□□□ -1.74
SHPRH-205ENST00000433355 EXOC4Q96A65 974 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms