RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 DDX19BQ9UMR2 479 aa21.12■□□□□ 0.97
CNOT9-204ENST00000432877 TACC3Q9Y6A5 838 aa21.12■□□□□ 0.97
CNOT9-204ENST00000432877 DNAH12Q6ZR08 3092 aa21.12■□□□□ 0.97
CNOT9-204ENST00000432877 ZNF236Q9UL36 1845 aa21.11■□□□□ 0.97
CNOT9-204ENST00000432877 APBB1O00213 710 aa21.11■□□□□ 0.97
CNOT9-204ENST00000432877 MYCNP04198 464 aaPredicted RBP21.11■□□□□ 0.97
CNOT9-204ENST00000432877 EEF2P13639 858 aaKnown RBP21.11■□□□□ 0.97
CNOT9-204ENST00000432877 STAT3P40763 770 aa21.11■□□□□ 0.97
CNOT9-204ENST00000432877 KCTD2Q14681 263 aa21.11■□□□□ 0.97
CNOT9-204ENST00000432877 SHHQ15465 462 aa21.11■□□□□ 0.97
CNOT9-204ENST00000432877 TRIM60Q495X7 471 aa21.11■□□□□ 0.97
CNOT9-204ENST00000432877 RNF180Q86T96 592 aa21.11■□□□□ 0.97
CNOT9-204ENST00000432877 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.11■□□□□ 0.97
CNOT9-204ENST00000432877 BADQ92934 168 aa21.11■□□□□ 0.97
CNOT9-204ENST00000432877 TINF2Q9BSI4 451 aa21.11■□□□□ 0.97
CNOT9-204ENST00000432877 ZBTB40Q9NUA8 1239 aa21.11■□□□□ 0.97
CNOT9-204ENST00000432877 PHF24Q9UPV7 400 aa21.11■□□□□ 0.97
CNOT9-204ENST00000432877 SMAD3P84022 425 aaKnown RBP21.1■□□□□ 0.97
CNOT9-204ENST00000432877 MSL3Q8N5Y2 521 aaKnown RBP21.1■□□□□ 0.97
CNOT9-204ENST00000432877 XPNPEP3Q9NQH7 507 aa21.1■□□□□ 0.97
CNOT9-204ENST00000432877 PDLIM7Q9NR12 457 aa21.1■□□□□ 0.97
CNOT9-204ENST00000432877 PPP1R9AQ9ULJ8 1098 aa21.1■□□□□ 0.97
CNOT9-204ENST00000432877 VWA5AO00534 786 aa21.09■□□□□ 0.97
CNOT9-204ENST00000432877 ZNF792Q3KQV3 632 aa21.09■□□□□ 0.97
CNOT9-204ENST00000432877 FAM47AQ5JRC9 791 aa21.09■□□□□ 0.97
CNOT9-204ENST00000432877 SIRT2Q8IXJ6 389 aa21.09■□□□□ 0.97
CNOT9-204ENST00000432877 SEMA6BQ9H3T3 888 aa21.09■□□□□ 0.97
CNOT9-204ENST00000432877 SLC4A4Q9Y6R1 1079 aa21.09■□□□□ 0.97
CNOT9-204ENST00000432877 TRIM43BA6NCK2 446 aa21.08■□□□□ 0.97
CNOT9-204ENST00000432877 TLE2Q04725 743 aa21.08■□□□□ 0.97
CNOT9-204ENST00000432877 CTR9Q6PD62 1173 aa21.08■□□□□ 0.97
CNOT9-204ENST00000432877 SAMD1Q6SPF0 538 aaPredicted RBP21.08■□□□□ 0.97
CNOT9-204ENST00000432877 CLEC10AQ8IUN9 316 aa21.08■□□□□ 0.97
CNOT9-204ENST00000432877 FERMT2Q96AC1 680 aa21.08■□□□□ 0.97
CNOT9-204ENST00000432877 TRIM43Q96BQ3 446 aaPredicted RBP21.08■□□□□ 0.97
CNOT9-204ENST00000432877 TSEN34Q9BSV6 310 aaKnown RBP21.08■□□□□ 0.97
CNOT9-204ENST00000432877 ZBED9Q6R2W3 1325 aa21.07■□□□□ 0.96
CNOT9-204ENST00000432877 AKR1A1P14550 325 aa21.07■□□□□ 0.96
CNOT9-204ENST00000432877 C9orf50Q5SZB4 431 aa21.07■□□□□ 0.96
CNOT9-204ENST00000432877 FAM161BQ96MY7 647 aa21.07■□□□□ 0.96
CNOT9-204ENST00000432877 CDX2Q99626 313 aaPredicted RBP21.07■□□□□ 0.96
CNOT9-204ENST00000432877 ARPP21Q9UBL0 812 aaPredicted RBP21.07■□□□□ 0.96
CNOT9-204ENST00000432877 CNPY2Q9Y2B0 182 aa21.07■□□□□ 0.96
CNOT9-204ENST00000432877 ROBO3Q96MS0 1386 aa21.07■□□□□ 0.96
CNOT9-204ENST00000432877 CYP2D7A0A087X1C5 515 aa21.06■□□□□ 0.96
CNOT9-204ENST00000432877 PGK2P07205 417 aa21.06■□□□□ 0.96
CNOT9-204ENST00000432877 CLTBP09497 229 aa21.06■□□□□ 0.96
CNOT9-204ENST00000432877 ZNF865P0CJ78 1059 aaPredicted RBP21.06■□□□□ 0.96
CNOT9-204ENST00000432877 GIMAP6Q6P9H5 292 aa21.06■□□□□ 0.96
CNOT9-204ENST00000432877 SH3RF1Q7Z6J0 888 aa21.06■□□□□ 0.96
CNOT9-204ENST00000432877 REPS2Q8NFH8 660 aa21.06■□□□□ 0.96
CNOT9-204ENST00000432877 TOX2Q96NM4 488 aa21.06■□□□□ 0.96
CNOT9-204ENST00000432877 COL25A1Q9BXS0 654 aaPredicted RBP21.06■□□□□ 0.96
CNOT9-204ENST00000432877 FBXO28Q9NVF7 368 aa21.06■□□□□ 0.96
CNOT9-204ENST00000432877 ZNF214Q9UL59 606 aaPredicted RBP21.06■□□□□ 0.96
CNOT9-204ENST00000432877 FRMPD3Q5JV73 1810 aa21.06■□□□□ 0.96
CNOT9-204ENST00000432877 NAV1Q8NEY1 1877 aa21.05■□□□□ 0.96
CNOT9-204ENST00000432877 TMEM265A0A087WTH1 108 aa21.05■□□□□ 0.96
CNOT9-204ENST00000432877 KIAA0355O15063 1070 aa21.05■□□□□ 0.96
CNOT9-204ENST00000432877 SLFNL1Q499Z3 407 aa21.05■□□□□ 0.96
CNOT9-204ENST00000432877 SBK1Q52WX2 424 aa21.05■□□□□ 0.96
CNOT9-204ENST00000432877 NYAP2Q9P242 653 aa21.05■□□□□ 0.96
CNOT9-204ENST00000432877 A0A0G2JMZ2 1700 aa21.04■□□□□ 0.96
CNOT9-204ENST00000432877 RLFQ13129 1914 aa21.04■□□□□ 0.96
CNOT9-204ENST00000432877 PGK1P00558 417 aa21.04■□□□□ 0.96
CNOT9-204ENST00000432877 FAM83BQ5T0W9 1011 aa21.04■□□□□ 0.96
CNOT9-204ENST00000432877 ANKRD33Q7Z3H0 272 aa21.04■□□□□ 0.96
CNOT9-204ENST00000432877 NUP133Q8WUM0 1156 aa21.04■□□□□ 0.96
CNOT9-204ENST00000432877 SLF1Q9BQI6 1058 aa21.04■□□□□ 0.96
CNOT9-204ENST00000432877 TEX13BQ9BXU2 312 aa21.04■□□□□ 0.96
CNOT9-204ENST00000432877 PUS7LQ9H0K6 701 aaKnown RBP21.04■□□□□ 0.96
CNOT9-204ENST00000432877 BCL11AQ9H165 835 aa21.04■□□□□ 0.96
CNOT9-204ENST00000432877 COG6Q9Y2V7 657 aa21.04■□□□□ 0.96
CNOT9-204ENST00000432877 CUL9Q8IWT3 2517 aa21.04■□□□□ 0.96
CNOT9-204ENST00000432877 SYNGAP1Q96PV0 1343 aa21.04■□□□□ 0.96
CNOT9-204ENST00000432877 A0A1W2PQ45 241 aaPredicted RBP21.03■□□□□ 0.96
CNOT9-204ENST00000432877 A0A1W2PQY0 241 aa21.03■□□□□ 0.96
CNOT9-204ENST00000432877 SMIM22K7EJ46 135 aa21.03■□□□□ 0.96
CNOT9-204ENST00000432877 ATP2A1O14983 1001 aa21.03■□□□□ 0.96
CNOT9-204ENST00000432877 RAG1P15918 1043 aa21.03■□□□□ 0.96
CNOT9-204ENST00000432877 MAMDC4Q6UXC1 1216 aa21.03■□□□□ 0.96
CNOT9-204ENST00000432877 PRPF38AQ8NAV1 312 aaKnown RBP21.03■□□□□ 0.96
CNOT9-204ENST00000432877 STRBPQ96SI9 672 aaKnown RBP21.03■□□□□ 0.96
CNOT9-204ENST00000432877 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.03■□□□□ 0.96
CNOT9-204ENST00000432877 LRRCC1Q9C099 1032 aa21.03■□□□□ 0.96
CNOT9-204ENST00000432877 MKNK2Q9HBH9 465 aa21.03■□□□□ 0.96
CNOT9-204ENST00000432877 FAM184BQ9ULE4 1060 aa21.03■□□□□ 0.96
CNOT9-204ENST00000432877 MOXD2PA6NHM9 499 aa21.02■□□□□ 0.96
CNOT9-204ENST00000432877 DCDC2CA8MYV0 355 aa21.02■□□□□ 0.96
CNOT9-204ENST00000432877 RAD21O60216 631 aa21.02■□□□□ 0.96
CNOT9-204ENST00000432877 TAL1P17542 331 aaPredicted RBP21.02■□□□□ 0.96
CNOT9-204ENST00000432877 ZNF467Q7Z7K2 595 aaPredicted RBP21.02■□□□□ 0.96
CNOT9-204ENST00000432877 DDX11Q96FC9 970 aa21.02■□□□□ 0.96
CNOT9-204ENST00000432877 ZNF287Q9HBT7 754 aa21.02■□□□□ 0.96
CNOT9-204ENST00000432877 TMEM39AQ9NV64 488 aa21.02■□□□□ 0.96
CNOT9-204ENST00000432877 LAMA2P24043 3122 aaKnown RBP21.01■□□□□ 0.95
CNOT9-204ENST00000432877 F5H6K3 240 aa21.01■□□□□ 0.95
CNOT9-204ENST00000432877 ZBED4O75132 1171 aa21.01■□□□□ 0.95
CNOT9-204ENST00000432877 ADAMTS4O75173 837 aa21.01■□□□□ 0.95
CNOT9-204ENST00000432877 KLRC3Q07444 240 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms