RNA–Protein interactions for RNA: ENST00000431716.2

CDRT15-202, CMT1A duplicated region transcript 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDRT15, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-202ENST00000431716 HOXA7P31268 230 aaPredicted RBP17.74■□□□□ 0.43
CDRT15-202ENST00000431716 ARHGEF6Q15052 776 aa17.74■□□□□ 0.43
CDRT15-202ENST00000431716 SLFN13Q68D06 897 aa17.74■□□□□ 0.43
CDRT15-202ENST00000431716 USP17L15C9J2P7 530 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 USP17L13C9JLJ4 530 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 USP17L11C9JVI0 530 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 USP17L18D6R9N7 530 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 USP17L22D6RA61 530 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 USP17L17D6RBQ6 530 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 USP17L19D6RCP7 530 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 USP17L20D6RJB6 530 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 SH2B2O14492 632 aaPredicted RBP17.73■□□□□ 0.43
CDRT15-202ENST00000431716 TLR2O60603 784 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 FGD1P98174 961 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 USP17L24Q0WX57 530 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 COL9A3Q14050 684 aaPredicted RBP17.73■□□□□ 0.43
CDRT15-202ENST00000431716 KIAA1755Q5JYT7 1200 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 TREML2Q5T2D2 321 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 SPICE1Q8N0Z3 855 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 FBXL16Q8N461 479 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 PNMA1Q8ND90 353 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 GMCL1Q96IK5 515 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 LY9Q9HBG7 655 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 PNMA3Q9UL41 463 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 TRIM17Q9Y577 477 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 LOC285556D6RIA3 1793 aa17.73■□□□□ 0.43
CDRT15-202ENST00000431716 OSBPP22059 807 aa17.72■□□□□ 0.43
CDRT15-202ENST00000431716 SLC1A4P43007 532 aa17.72■□□□□ 0.43
CDRT15-202ENST00000431716 KIF22Q14807 665 aa17.72■□□□□ 0.43
CDRT15-202ENST00000431716 CATSPERGQ6ZRH7 1159 aa17.72■□□□□ 0.43
CDRT15-202ENST00000431716 CATIPQ7Z7H3 387 aa17.72■□□□□ 0.43
CDRT15-202ENST00000431716 CD99L2Q8TCZ2 262 aa17.72■□□□□ 0.43
CDRT15-202ENST00000431716 DCAF4Q8WV16 495 aa17.72■□□□□ 0.43
CDRT15-202ENST00000431716 PARK7Q99497 189 aaKnown RBP17.72■□□□□ 0.43
CDRT15-202ENST00000431716 RPAP3Q9H6T3 665 aaPredicted RBP17.72■□□□□ 0.43
CDRT15-202ENST00000431716 CCDC69A6NI79 296 aa17.71■□□□□ 0.43
CDRT15-202ENST00000431716 BMP3P12645 472 aa17.71■□□□□ 0.43
CDRT15-202ENST00000431716 CPA1P15085 419 aa17.71■□□□□ 0.43
CDRT15-202ENST00000431716 IRX3P78415 501 aaPredicted RBP17.71■□□□□ 0.43
CDRT15-202ENST00000431716 NFXL1Q6ZNB6 911 aa17.71■□□□□ 0.43
CDRT15-202ENST00000431716 SGMS1Q86VZ5 419 aa17.71■□□□□ 0.43
CDRT15-202ENST00000431716 IL27Q8NEV9 243 aa17.71■□□□□ 0.43
CDRT15-202ENST00000431716 TCEANC2Q96MN5 208 aa17.71■□□□□ 0.43
CDRT15-202ENST00000431716 TBC1D32Q96NH3 1257 aa17.71■□□□□ 0.43
CDRT15-202ENST00000431716 LRRC2Q9BYS8 371 aa17.71■□□□□ 0.43
CDRT15-202ENST00000431716 UPF3BQ9BZI7 483 aaKnown RBP17.71■□□□□ 0.43
CDRT15-202ENST00000431716 TANGO6Q9C0B7 1094 aa17.71■□□□□ 0.43
CDRT15-202ENST00000431716 EFCC1Q9HA90 598 aa17.71■□□□□ 0.43
CDRT15-202ENST00000431716 CPA4Q9UI42 421 aa17.71■□□□□ 0.43
CDRT15-202ENST00000431716 CASP8AP2Q9UKL3 1982 aa17.7■□□□□ 0.42
CDRT15-202ENST00000431716 PDHBP11177 359 aa17.7■□□□□ 0.42
CDRT15-202ENST00000431716 COG2Q14746 738 aa17.7■□□□□ 0.42
CDRT15-202ENST00000431716 FAM83BQ5T0W9 1011 aa17.7■□□□□ 0.42
CDRT15-202ENST00000431716 SYNE3Q6ZMZ3 975 aa17.7■□□□□ 0.42
CDRT15-202ENST00000431716 Q6ZUG5 572 aa17.7■□□□□ 0.42
CDRT15-202ENST00000431716 ASCC2Q9H1I8 757 aaPredicted RBP17.7■□□□□ 0.42
CDRT15-202ENST00000431716 ALDH8A1Q9H2A2 487 aaPredicted RBP17.7■□□□□ 0.42
CDRT15-202ENST00000431716 SENP2Q9HC62 589 aa17.7■□□□□ 0.42
CDRT15-202ENST00000431716 GPHNQ9NQX3 736 aaPredicted RBP17.7■□□□□ 0.42
CDRT15-202ENST00000431716 PDRG1Q9NUG6 133 aa17.7■□□□□ 0.42
CDRT15-202ENST00000431716 HOXC10Q9NYD6 342 aa17.7■□□□□ 0.42
CDRT15-202ENST00000431716 SLC12A7Q9Y666 1083 aa17.7■□□□□ 0.42
CDRT15-202ENST00000431716 CALM1P0DP23 149 aa17.69■□□□□ 0.42
CDRT15-202ENST00000431716 CALM2P0DP24 149 aa17.69■□□□□ 0.42
CDRT15-202ENST00000431716 CALM3P0DP25 149 aa17.69■□□□□ 0.42
CDRT15-202ENST00000431716 SNHG28P0DPA3 235 aa17.69■□□□□ 0.42
CDRT15-202ENST00000431716 CYP2C8P10632 490 aa17.69■□□□□ 0.42
CDRT15-202ENST00000431716 GPATCH4Q5T3I0 446 aaKnown RBP17.69■□□□□ 0.42
CDRT15-202ENST00000431716 FBXO46Q6PJ61 603 aaPredicted RBP17.69■□□□□ 0.42
CDRT15-202ENST00000431716 OTOP1Q7RTM1 612 aa17.69■□□□□ 0.42
CDRT15-202ENST00000431716 SMCR8Q8TEV9 937 aaPredicted RBP17.69■□□□□ 0.42
CDRT15-202ENST00000431716 CHURC1Q8WUH1 139 aa17.69■□□□□ 0.42
CDRT15-202ENST00000431716 MAP3K14Q99558 947 aa17.69■□□□□ 0.42
CDRT15-202ENST00000431716 NUP88Q99567 741 aaPredicted RBP17.69■□□□□ 0.42
CDRT15-202ENST00000431716 AGXT2Q9BYV1 514 aa17.69■□□□□ 0.42
CDRT15-202ENST00000431716 FEM1BQ9UK73 627 aa17.69■□□□□ 0.42
CDRT15-202ENST00000431716 MTMR7Q9Y216 660 aa17.69■□□□□ 0.42
CDRT15-202ENST00000431716 PLA2G6O60733 806 aa17.68■□□□□ 0.42
CDRT15-202ENST00000431716 FLOT1O75955 427 aa17.68■□□□□ 0.42
CDRT15-202ENST00000431716 DDAH1O94760 285 aa17.68■□□□□ 0.42
CDRT15-202ENST00000431716 NEK4P51957 841 aa17.68■□□□□ 0.42
CDRT15-202ENST00000431716 TROAPQ12815 778 aa17.68■□□□□ 0.42
CDRT15-202ENST00000431716 CCDC96Q2M329 555 aa17.68■□□□□ 0.42
CDRT15-202ENST00000431716 ZNF654Q8IZM8 581 aa17.68■□□□□ 0.42
CDRT15-202ENST00000431716 GTF3C2Q8WUA4 911 aaPredicted RBP17.68■□□□□ 0.42
CDRT15-202ENST00000431716 P2RX7Q99572 595 aaKnown RBP17.68■□□□□ 0.42
CDRT15-202ENST00000431716 KIF2CQ99661 725 aa17.68■□□□□ 0.42
CDRT15-202ENST00000431716 ISY1Q9ULR0 285 aaKnown RBP17.68■□□□□ 0.42
CDRT15-202ENST00000431716 HPS5Q9UPZ3 1129 aa17.68■□□□□ 0.42
CDRT15-202ENST00000431716 MYPNQ86TC9 1320 aa17.68■□□□□ 0.42
CDRT15-202ENST00000431716 TMEM232C9JQI7 657 aa17.67■□□□□ 0.42
CDRT15-202ENST00000431716 ECM2O94769 699 aaPredicted RBP17.67■□□□□ 0.42
CDRT15-202ENST00000431716 PARP1P09874 1014 aaKnown RBP17.67■□□□□ 0.42
CDRT15-202ENST00000431716 GCLCP48506 637 aaPredicted RBP17.67■□□□□ 0.42
CDRT15-202ENST00000431716 ZNF543Q08ER8 600 aa17.67■□□□□ 0.42
CDRT15-202ENST00000431716 RABEP1Q15276 862 aa17.67■□□□□ 0.42
CDRT15-202ENST00000431716 ANKRD1Q15327 319 aa17.67■□□□□ 0.42
CDRT15-202ENST00000431716 ASPRV1Q53RT3 343 aa17.67■□□□□ 0.42
CDRT15-202ENST00000431716 C17orf99Q6UX52 265 aa17.67■□□□□ 0.42
CDRT15-202ENST00000431716 FAM160B2Q86V87 743 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms