RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 ZNF655Q8N720 491 aaPredicted RBP8.14□□□□□ -1.11
PTPN4-204ENST00000431283 DAGLBQ8NCG7 672 aa8.14□□□□□ -1.11
PTPN4-204ENST00000431283 NKD1Q969G9 470 aa8.14□□□□□ -1.11
PTPN4-204ENST00000431283 ADAMTS1Q9UHI8 967 aa8.14□□□□□ -1.11
PTPN4-204ENST00000431283 CCNFP41002 786 aa8.13□□□□□ -1.11
PTPN4-204ENST00000431283 NBPF12Q5TAG4 269 aaPredicted RBP8.13□□□□□ -1.11
PTPN4-204ENST00000431283 TMCO4Q5TGY1 634 aa8.13□□□□□ -1.11
PTPN4-204ENST00000431283 TMEM132EQ6IEE7 984 aa8.13□□□□□ -1.11
PTPN4-204ENST00000431283 ATG14Q6ZNE5 492 aa8.13□□□□□ -1.11
PTPN4-204ENST00000431283 KIAA0825Q8IV33 1275 aa8.13□□□□□ -1.11
PTPN4-204ENST00000431283 ATG4CQ96DT6 458 aa8.13□□□□□ -1.11
PTPN4-204ENST00000431283 HDAC8Q9BY41 377 aa8.13□□□□□ -1.11
PTPN4-204ENST00000431283 CNNM2Q9H8M5 875 aa8.13□□□□□ -1.11
PTPN4-204ENST00000431283 TCFL5Q9UL49 500 aa8.13□□□□□ -1.11
PTPN4-204ENST00000431283 CFPP27918 469 aa8.12□□□□□ -1.11
PTPN4-204ENST00000431283 POLR2BP30876 1174 aaKnown RBP8.12□□□□□ -1.11
PTPN4-204ENST00000431283 CLCQ05315 142 aa8.12□□□□□ -1.11
PTPN4-204ENST00000431283 NBPF9Q3BBW0 867 aa8.12□□□□□ -1.11
PTPN4-204ENST00000431283 ZNF605Q86T29 641 aa8.12□□□□□ -1.11
PTPN4-204ENST00000431283 VWCEQ96DN2 955 aa8.12□□□□□ -1.11
PTPN4-204ENST00000431283 INTS4Q96HW7 963 aaKnown RBP8.12□□□□□ -1.11
PTPN4-204ENST00000431283 SPON2Q9BUD6 331 aa8.12□□□□□ -1.11
PTPN4-204ENST00000431283 FOXP3Q9BZS1 431 aa8.12□□□□□ -1.11
PTPN4-204ENST00000431283 MKRN2Q9H000 416 aaKnown RBP8.12□□□□□ -1.11
PTPN4-204ENST00000431283 KCNK12Q9HB15 430 aa8.12□□□□□ -1.11
PTPN4-204ENST00000431283 YBX2Q9Y2T7 364 aaKnown RBP8.12□□□□□ -1.11
PTPN4-204ENST00000431283 ARID1BQ8NFD5 2236 aaPredicted RBP8.11□□□□□ -1.11
PTPN4-204ENST00000431283 NPIPB6E9PJ23 425 aa8.11□□□□□ -1.11
PTPN4-204ENST00000431283 TIGD5Q53EQ6 642 aa8.11□□□□□ -1.11
PTPN4-204ENST00000431283 FBLN7Q53RD9 439 aa8.11□□□□□ -1.11
PTPN4-204ENST00000431283 CIAPIN1Q6FI81 312 aa8.11□□□□□ -1.11
PTPN4-204ENST00000431283 TMC3Q7Z5M5 1100 aa8.11□□□□□ -1.11
PTPN4-204ENST00000431283 TCTN2Q96GX1 697 aa8.11□□□□□ -1.11
PTPN4-204ENST00000431283 NT5C1AQ9BXI3 368 aa8.11□□□□□ -1.11
PTPN4-204ENST00000431283 NISCHQ9Y2I1 1504 aa8.1□□□□□ -1.11
PTPN4-204ENST00000431283 ETV2O00321 342 aaPredicted RBP8.1□□□□□ -1.11
PTPN4-204ENST00000431283 SYPP08247 313 aa8.1□□□□□ -1.11
PTPN4-204ENST00000431283 GLDCP23378 1020 aa8.1□□□□□ -1.11
PTPN4-204ENST00000431283 ZNF76P36508 570 aa8.1□□□□□ -1.11
PTPN4-204ENST00000431283 KCNA10Q16322 511 aa8.1□□□□□ -1.11
PTPN4-204ENST00000431283 SPOCD1Q6ZMY3 1216 aa8.1□□□□□ -1.11
PTPN4-204ENST00000431283 USHBP1Q8N6Y0 703 aa8.1□□□□□ -1.11
PTPN4-204ENST00000431283 ZNF512BQ96KM6 892 aaPredicted RBP8.1□□□□□ -1.11
PTPN4-204ENST00000431283 SP110Q9HB58 689 aa8.1□□□□□ -1.11
PTPN4-204ENST00000431283 FBXL21Q9UKT6 434 aa8.1□□□□□ -1.11
PTPN4-204ENST00000431283 FKTNO75072 461 aa8.09□□□□□ -1.11
PTPN4-204ENST00000431283 PRAMEF1O95521 474 aa8.09□□□□□ -1.11
PTPN4-204ENST00000431283 ENDOUP21128 410 aaKnown RBP8.09□□□□□ -1.11
PTPN4-204ENST00000431283 LINC00116Q8NCU8 138 aa8.09□□□□□ -1.11
PTPN4-204ENST00000431283 LINC01599Q8WXQ3 324 aa8.09□□□□□ -1.11
PTPN4-204ENST00000431283 DHRS1Q96LJ7 313 aa8.09□□□□□ -1.11
PTPN4-204ENST00000431283 SIGLEC6O43699 453 aa8.08□□□□□ -1.12
PTPN4-204ENST00000431283 PSPNO60542 156 aa8.08□□□□□ -1.12
PTPN4-204ENST00000431283 USP2O75604 605 aaPredicted RBP8.08□□□□□ -1.12
PTPN4-204ENST00000431283 MED14OSP0DP75 135 aa8.08□□□□□ -1.12
PTPN4-204ENST00000431283 ZSCAN22P10073 491 aaPredicted RBP8.08□□□□□ -1.12
PTPN4-204ENST00000431283 IMPDH2P12268 514 aa8.08□□□□□ -1.12
PTPN4-204ENST00000431283 NME1P15531 152 aaKnown RBP8.08□□□□□ -1.12
PTPN4-204ENST00000431283 ZNF16P17020 682 aaPredicted RBP8.08□□□□□ -1.12
PTPN4-204ENST00000431283 KIR2DL1P43626 348 aaPredicted RBP8.08□□□□□ -1.12
PTPN4-204ENST00000431283 KIR2DL2P43627 348 aaPredicted RBP8.08□□□□□ -1.12
PTPN4-204ENST00000431283 CEP128Q6ZU80 1094 aa8.08□□□□□ -1.12
PTPN4-204ENST00000431283 MAP6Q96JE9 813 aa8.08□□□□□ -1.12
PTPN4-204ENST00000431283 SLC6A18Q96N87 628 aa8.08□□□□□ -1.12
PTPN4-204ENST00000431283 PRDM14Q9GZV8 571 aa8.08□□□□□ -1.12
PTPN4-204ENST00000431283 CHST7Q9NS84 486 aa8.08□□□□□ -1.12
PTPN4-204ENST00000431283 SMG5Q9UPR3 1016 aaKnown RBP8.08□□□□□ -1.12
PTPN4-204ENST00000431283 PCDHB12Q9Y5F1 795 aa8.08□□□□□ -1.12
PTPN4-204ENST00000431283 OR14I1A6ND48 311 aa8.07□□□□□ -1.12
PTPN4-204ENST00000431283 NUAK1O60285 661 aa8.07□□□□□ -1.12
PTPN4-204ENST00000431283 SEMA7AO75326 666 aa8.07□□□□□ -1.12
PTPN4-204ENST00000431283 SNW1Q13573 536 aaKnown RBP8.07□□□□□ -1.12
PTPN4-204ENST00000431283 ADGRF1Q5T601 910 aa8.07□□□□□ -1.12
PTPN4-204ENST00000431283 USP48Q86UV5 1035 aa8.07□□□□□ -1.12
PTPN4-204ENST00000431283 SIAH1Q8IUQ4 282 aa8.07□□□□□ -1.12
PTPN4-204ENST00000431283 SLITRK4Q8IW52 837 aa8.07□□□□□ -1.12
PTPN4-204ENST00000431283 SIRT2Q8IXJ6 389 aa8.07□□□□□ -1.12
PTPN4-204ENST00000431283 FERD3LQ96RJ6 166 aa8.07□□□□□ -1.12
PTPN4-204ENST00000431283 CD320Q9NPF0 282 aa8.07□□□□□ -1.12
PTPN4-204ENST00000431283 MEIS3P2A8K0S8 358 aa8.06□□□□□ -1.12
PTPN4-204ENST00000431283 MEIS1O00470 390 aa8.06□□□□□ -1.12
PTPN4-204ENST00000431283 PEX10O60683 326 aa8.06□□□□□ -1.12
PTPN4-204ENST00000431283 KRT1P04264 644 aa8.06□□□□□ -1.12
PTPN4-204ENST00000431283 ANTXR1Q9H6X2 564 aa8.06□□□□□ -1.12
PTPN4-204ENST00000431283 EBF1Q9UH73 591 aa8.06□□□□□ -1.12
PTPN4-204ENST00000431283 TNFRSF10CO14798 259 aa8.05□□□□□ -1.12
PTPN4-204ENST00000431283 FBXW10Q5XX13 1052 aa8.05□□□□□ -1.12
PTPN4-204ENST00000431283 CILP2Q8IUL8 1156 aa8.05□□□□□ -1.12
PTPN4-204ENST00000431283 EAF1Q96JC9 268 aaPredicted RBP8.05□□□□□ -1.12
PTPN4-204ENST00000431283 G6PC3Q9BUM1 346 aa8.05□□□□□ -1.12
PTPN4-204ENST00000431283 DSCC1Q9BVC3 393 aa8.05□□□□□ -1.12
PTPN4-204ENST00000431283 CDADC1Q9BWV3 514 aa8.05□□□□□ -1.12
PTPN4-204ENST00000431283 MCOLN1Q9GZU1 580 aa8.05□□□□□ -1.12
PTPN4-204ENST00000431283 ZNF552Q9H707 407 aaPredicted RBP8.05□□□□□ -1.12
PTPN4-204ENST00000431283 GFOD1Q9NXC2 390 aa8.05□□□□□ -1.12
PTPN4-204ENST00000431283 ZNF281Q9Y2X9 895 aa8.05□□□□□ -1.12
PTPN4-204ENST00000431283 FAM86C2PA6NEL3 165 aa8.04□□□□□ -1.12
PTPN4-204ENST00000431283 NRDCO43847 1150 aa8.04□□□□□ -1.12
PTPN4-204ENST00000431283 GALK1P51570 392 aa8.04□□□□□ -1.12
PTPN4-204ENST00000431283 RTP1P59025 263 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms