RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 RBPJLQ9UBG7 517 aa23.58■■□□□ 1.37
CSNK1E-207ENST00000430335 MCCP23508 829 aa23.57■■□□□ 1.36
CSNK1E-207ENST00000430335 MCM5P33992 734 aa23.57■■□□□ 1.36
CSNK1E-207ENST00000430335 LACTBP83111 547 aaPredicted RBP23.57■■□□□ 1.36
CSNK1E-207ENST00000430335 POTEEQ6S8J3 1075 aa23.57■■□□□ 1.36
CSNK1E-207ENST00000430335 NEK1Q96PY6 1258 aa23.57■■□□□ 1.36
CSNK1E-207ENST00000430335 KAT14Q9H8E8 782 aa23.57■■□□□ 1.36
CSNK1E-207ENST00000430335 FEM1BQ9UK73 627 aa23.57■■□□□ 1.36
CSNK1E-207ENST00000430335 PPP1R9AQ9ULJ8 1098 aa23.57■■□□□ 1.36
CSNK1E-207ENST00000430335 RABGAP1Q9Y3P9 1069 aa23.57■■□□□ 1.36
CSNK1E-207ENST00000430335 ERICH2A1L162 156 aa23.56■■□□□ 1.36
CSNK1E-207ENST00000430335 IFIT3O14879 490 aaKnown RBP23.56■■□□□ 1.36
CSNK1E-207ENST00000430335 SNHG28P0DPA3 235 aa23.56■■□□□ 1.36
CSNK1E-207ENST00000430335 IFIT1BQ5T764 474 aaKnown RBP23.56■■□□□ 1.36
CSNK1E-207ENST00000430335 MB21D1Q8N884 522 aa23.56■■□□□ 1.36
CSNK1E-207ENST00000430335 PNMA1Q8ND90 353 aa23.56■■□□□ 1.36
CSNK1E-207ENST00000430335 TXNRD2Q9NNW7 524 aa23.56■■□□□ 1.36
CSNK1E-207ENST00000430335 FBXO28Q9NVF7 368 aa23.56■■□□□ 1.36
CSNK1E-207ENST00000430335 ADAMTS5Q9UNA0 930 aa23.56■■□□□ 1.36
CSNK1E-207ENST00000430335 SNX14Q9Y5W7 946 aa23.56■■□□□ 1.36
CSNK1E-207ENST00000430335 PRC1O43663 620 aa23.55■■□□□ 1.36
CSNK1E-207ENST00000430335 PLA2G6O60733 806 aa23.55■■□□□ 1.36
CSNK1E-207ENST00000430335 PDHBP11177 359 aa23.55■■□□□ 1.36
CSNK1E-207ENST00000430335 KIF22Q14807 665 aa23.55■■□□□ 1.36
CSNK1E-207ENST00000430335 CHST3Q7LGC8 479 aa23.55■■□□□ 1.36
CSNK1E-207ENST00000430335 GPRC5AQ8NFJ5 357 aa23.55■■□□□ 1.36
CSNK1E-207ENST00000430335 CD99L2Q8TCZ2 262 aa23.55■■□□□ 1.36
CSNK1E-207ENST00000430335 IGDCC4Q8TDY8 1250 aa23.55■■□□□ 1.36
CSNK1E-207ENST00000430335 TMEM87BQ96K49 555 aa23.55■■□□□ 1.36
CSNK1E-207ENST00000430335 SLF1Q9BQI6 1058 aa23.55■■□□□ 1.36
CSNK1E-207ENST00000430335 CASP8AP2Q9UKL3 1982 aa23.54■■□□□ 1.36
CSNK1E-207ENST00000430335 CNMDO75829 334 aa23.54■■□□□ 1.36
CSNK1E-207ENST00000430335 HMGB1P09429 215 aaKnown RBP23.54■■□□□ 1.36
CSNK1E-207ENST00000430335 ERVK-9P63128 1117 aa23.54■■□□□ 1.36
CSNK1E-207ENST00000430335 ERVK-24P63145 666 aa23.54■■□□□ 1.36
CSNK1E-207ENST00000430335 WTAPQ15007 396 aa23.54■■□□□ 1.36
CSNK1E-207ENST00000430335 ARHGEF6Q15052 776 aa23.54■■□□□ 1.36
CSNK1E-207ENST00000430335 ADCK5Q3MIX3 580 aa23.54■■□□□ 1.36
CSNK1E-207ENST00000430335 C8orf34Q49A92 452 aa23.54■■□□□ 1.36
CSNK1E-207ENST00000430335 TMEM67Q5HYA8 995 aa23.54■■□□□ 1.36
CSNK1E-207ENST00000430335 FAM160B2Q86V87 743 aa23.54■■□□□ 1.36
CSNK1E-207ENST00000430335 PRPF38AQ8NAV1 312 aaKnown RBP23.54■■□□□ 1.36
CSNK1E-207ENST00000430335 ATG4CQ96DT6 458 aa23.54■■□□□ 1.36
CSNK1E-207ENST00000430335 RLFQ13129 1914 aa23.54■■□□□ 1.36
CSNK1E-207ENST00000430335 WDR19Q8NEZ3 1342 aa23.54■■□□□ 1.36
CSNK1E-207ENST00000430335 TMEM232C9JQI7 657 aa23.53■■□□□ 1.36
CSNK1E-207ENST00000430335 STAT2P52630 851 aa23.53■■□□□ 1.36
CSNK1E-207ENST00000430335 COL9A3Q14050 684 aaPredicted RBP23.53■■□□□ 1.36
CSNK1E-207ENST00000430335 CHURC1Q8WUH1 139 aa23.53■■□□□ 1.36
CSNK1E-207ENST00000430335 PAGR1Q9BTK6 254 aa23.53■■□□□ 1.36
CSNK1E-207ENST00000430335 BTBD7Q9P203 1132 aa23.53■■□□□ 1.36
CSNK1E-207ENST00000430335 CAP1Q01518 475 aa23.52■■□□□ 1.36
CSNK1E-207ENST00000430335 Q3C1V9 767 aa23.52■■□□□ 1.36
CSNK1E-207ENST00000430335 KCTD1Q719H9 257 aa23.52■■□□□ 1.36
CSNK1E-207ENST00000430335 DHX32Q7L7V1 743 aaKnown RBP23.52■■□□□ 1.36
CSNK1E-207ENST00000430335 RASGRP2Q7LDG7 609 aa23.52■■□□□ 1.36
CSNK1E-207ENST00000430335 CTU1Q7Z7A3 348 aaKnown RBP23.52■■□□□ 1.36
CSNK1E-207ENST00000430335 TMTC2Q8N394 836 aa23.52■■□□□ 1.36
CSNK1E-207ENST00000430335 MTMR7Q9Y216 660 aa23.52■■□□□ 1.36
CSNK1E-207ENST00000430335 VWA5AO00534 786 aa23.51■■□□□ 1.35
CSNK1E-207ENST00000430335 SH2B2O14492 632 aaPredicted RBP23.51■■□□□ 1.35
CSNK1E-207ENST00000430335 GNRH1P01148 92 aa23.51■■□□□ 1.35
CSNK1E-207ENST00000430335 FDX1P10109 184 aa23.51■■□□□ 1.35
CSNK1E-207ENST00000430335 CTGFP29279 349 aa23.51■■□□□ 1.35
CSNK1E-207ENST00000430335 PSMC4P43686 418 aa23.51■■□□□ 1.35
CSNK1E-207ENST00000430335 EXOSC10Q01780 885 aaKnown RBP23.51■■□□□ 1.35
CSNK1E-207ENST00000430335 ZNF543Q08ER8 600 aa23.51■■□□□ 1.35
CSNK1E-207ENST00000430335 CCDC96Q2M329 555 aa23.51■■□□□ 1.35
CSNK1E-207ENST00000430335 GPATCH4Q5T3I0 446 aaKnown RBP23.51■■□□□ 1.35
CSNK1E-207ENST00000430335 BTNL9Q6UXG8 535 aa23.51■■□□□ 1.35
CSNK1E-207ENST00000430335 EFCC1Q9HA90 598 aa23.51■■□□□ 1.35
CSNK1E-207ENST00000430335 LY9Q9HBG7 655 aa23.51■■□□□ 1.35
CSNK1E-207ENST00000430335 PEX10O60683 326 aa23.5■■□□□ 1.35
CSNK1E-207ENST00000430335 PSMA5P28066 241 aa23.5■■□□□ 1.35
CSNK1E-207ENST00000430335 LIFRP42702 1097 aa23.5■■□□□ 1.35
CSNK1E-207ENST00000430335 FCGRTP55899 365 aa23.5■■□□□ 1.35
CSNK1E-207ENST00000430335 CCNA1P78396 465 aa23.5■■□□□ 1.35
CSNK1E-207ENST00000430335 OTOP1Q7RTM1 612 aa23.5■■□□□ 1.35
CSNK1E-207ENST00000430335 REPS2Q8NFH8 660 aa23.5■■□□□ 1.35
CSNK1E-207ENST00000430335 KIFC2Q96AC6 838 aa23.5■■□□□ 1.35
CSNK1E-207ENST00000430335 TRIM47Q96LD4 638 aa23.5■■□□□ 1.35
CSNK1E-207ENST00000430335 JAKMIP1Q96N16 626 aaKnown RBP23.5■■□□□ 1.35
CSNK1E-207ENST00000430335 ARHGAP39Q9C0H5 1083 aa23.5■■□□□ 1.35
CSNK1E-207ENST00000430335 ISY1Q9ULR0 285 aaKnown RBP23.5■■□□□ 1.35
CSNK1E-207ENST00000430335 PARP14Q460N5 1801 aa23.49■■□□□ 1.35
CSNK1E-207ENST00000430335 SEC24BO95487 1268 aa23.49■■□□□ 1.35
CSNK1E-207ENST00000430335 SAMD1Q6SPF0 538 aaPredicted RBP23.49■■□□□ 1.35
CSNK1E-207ENST00000430335 CHMP4CQ96CF2 233 aa23.49■■□□□ 1.35
CSNK1E-207ENST00000430335 SPATC1LQ9H0A9 340 aa23.49■■□□□ 1.35
CSNK1E-207ENST00000430335 SLC38A10Q9HBR0 1119 aa23.49■■□□□ 1.35
CSNK1E-207ENST00000430335 SENP2Q9HC62 589 aa23.49■■□□□ 1.35
CSNK1E-207ENST00000430335 A0A0G2JMZ2 1700 aa23.49■■□□□ 1.35
CSNK1E-207ENST00000430335 FMNL1O95466 1100 aaPredicted RBP23.48■■□□□ 1.35
CSNK1E-207ENST00000430335 MAPK4P31152 587 aa23.48■■□□□ 1.35
CSNK1E-207ENST00000430335 IKQ13123 557 aaPredicted RBP23.48■■□□□ 1.35
CSNK1E-207ENST00000430335 TMEM132BQ14DG7 1078 aa23.48■■□□□ 1.35
CSNK1E-207ENST00000430335 PKN2Q16513 984 aaKnown RBP23.48■■□□□ 1.35
CSNK1E-207ENST00000430335 ASPRV1Q53RT3 343 aa23.48■■□□□ 1.35
CSNK1E-207ENST00000430335 COL13A1Q5TAT6 717 aaPredicted RBP23.48■■□□□ 1.35
CSNK1E-207ENST00000430335 BLOC1S2Q6QNY1 142 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms