RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 CMA1P23946 247 aa16.42■□□□□ 0.22
CALD1-207ENST00000430085 SMARCA1P28370 1054 aa16.42■□□□□ 0.22
CALD1-207ENST00000430085 ATP2B2Q01814 1243 aa16.42■□□□□ 0.22
CALD1-207ENST00000430085 CXCL9Q07325 125 aa16.42■□□□□ 0.22
CALD1-207ENST00000430085 SNW1Q13573 536 aaKnown RBP16.42■□□□□ 0.22
CALD1-207ENST00000430085 C9orf131Q5VYM1 1079 aa16.42■□□□□ 0.22
CALD1-207ENST00000430085 RASGRP2Q7LDG7 609 aa16.42■□□□□ 0.22
CALD1-207ENST00000430085 CLEC10AQ8IUN9 316 aa16.42■□□□□ 0.22
CALD1-207ENST00000430085 CKAP2LQ8IYA6 745 aa16.42■□□□□ 0.22
CALD1-207ENST00000430085 CCDC148Q8NFR7 591 aa16.42■□□□□ 0.22
CALD1-207ENST00000430085 GPKOWQ92917 476 aaPredicted RBP eCLIP16.42■□□□□ 0.22
CALD1-207ENST00000430085 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.42■□□□□ 0.22
CALD1-207ENST00000430085 SIPA1L1O43166 1804 aa16.42■□□□□ 0.22
CALD1-207ENST00000430085 FAM196BA6NMK8 535 aa16.41■□□□□ 0.22
CALD1-207ENST00000430085 ATP2B1P20020 1258 aa16.41■□□□□ 0.22
CALD1-207ENST00000430085 ASPRV1Q53RT3 343 aa16.41■□□□□ 0.22
CALD1-207ENST00000430085 AXDND1Q5T1B0 1012 aaPredicted RBP16.41■□□□□ 0.22
CALD1-207ENST00000430085 CIAPIN1Q6FI81 312 aa16.41■□□□□ 0.22
CALD1-207ENST00000430085 HEATR3Q7Z4Q2 680 aa16.41■□□□□ 0.22
CALD1-207ENST00000430085 ENGASEQ8NFI3 743 aa16.41■□□□□ 0.22
CALD1-207ENST00000430085 RRP36Q96EU6 259 aaKnown RBP16.41■□□□□ 0.22
CALD1-207ENST00000430085 FUCA2Q9BTY2 467 aa16.41■□□□□ 0.22
CALD1-207ENST00000430085 SEC63Q9UGP8 760 aaKnown RBP16.41■□□□□ 0.22
CALD1-207ENST00000430085 BAZ2BQ9UIF8 2168 aaKnown RBP16.41■□□□□ 0.22
CALD1-207ENST00000430085 CLRN2A0PK11 232 aa16.41■□□□□ 0.22
CALD1-207ENST00000430085 TCP10L2B9ZVM9 353 aa16.41■□□□□ 0.22
CALD1-207ENST00000430085 SLURP2P0DP57 97 aa16.41■□□□□ 0.22
CALD1-207ENST00000430085 NDUFA8P51970 172 aa16.41■□□□□ 0.22
CALD1-207ENST00000430085 NPY5RQ15761 445 aa16.41■□□□□ 0.22
CALD1-207ENST00000430085 TATDN1Q6P1N9 297 aa16.41■□□□□ 0.22
CALD1-207ENST00000430085 RBM43Q6ZSC3 357 aaKnown RBP16.41■□□□□ 0.22
CALD1-207ENST00000430085 FMR1NBQ8N0W7 255 aaPredicted RBP16.41■□□□□ 0.22
CALD1-207ENST00000430085 KRI1Q8N9T8 703 aaKnown RBP16.41■□□□□ 0.22
CALD1-207ENST00000430085 CSRNP1Q96S65 589 aa16.41■□□□□ 0.22
CALD1-207ENST00000430085 ZNF70Q9UC06 446 aaPredicted RBP16.41■□□□□ 0.22
CALD1-207ENST00000430085 TRIM75PA6NK02 468 aa16.4■□□□□ 0.22
CALD1-207ENST00000430085 CUTAO60888 179 aa16.4■□□□□ 0.22
CALD1-207ENST00000430085 VEGFAP15692 232 aaPredicted RBP16.4■□□□□ 0.22
CALD1-207ENST00000430085 TNIP1Q15025 636 aa16.4■□□□□ 0.22
CALD1-207ENST00000430085 SLC35G1Q2M3R5 365 aa16.4■□□□□ 0.22
CALD1-207ENST00000430085 WWC2Q6AWC2 1192 aa16.4■□□□□ 0.22
CALD1-207ENST00000430085 SASS6Q6UVJ0 657 aa16.4■□□□□ 0.22
CALD1-207ENST00000430085 FAM177A1Q8N128 213 aaPredicted RBP16.4■□□□□ 0.22
CALD1-207ENST00000430085 PCDHB6Q9Y5E3 794 aa16.4■□□□□ 0.22
CALD1-207ENST00000430085 FRMPD2Q68DX3 1309 aaPredicted RBP16.4■□□□□ 0.22
CALD1-207ENST00000430085 GREB1LQ9C091 1923 aaPredicted RBP16.4■□□□□ 0.22
CALD1-207ENST00000430085 MYO1BO43795 1136 aa16.39■□□□□ 0.21
CALD1-207ENST00000430085 SPDYE2Q495Y8 402 aa16.39■□□□□ 0.21
CALD1-207ENST00000430085 METTL16Q86W50 562 aaKnown RBP16.39■□□□□ 0.21
CALD1-207ENST00000430085 HOMER1Q86YM7 354 aa16.39■□□□□ 0.21
CALD1-207ENST00000430085 BLIDQ8IZY5 108 aa16.39■□□□□ 0.21
CALD1-207ENST00000430085 CCDC12Q8WUD4 166 aaPredicted RBP16.39■□□□□ 0.21
CALD1-207ENST00000430085 TNFRSF25Q93038 417 aa16.39■□□□□ 0.21
CALD1-207ENST00000430085 CPVLQ9H3G5 476 aa16.39■□□□□ 0.21
CALD1-207ENST00000430085 KANSL2Q9H9L4 492 aa16.39■□□□□ 0.21
CALD1-207ENST00000430085 BARHL2Q9NY43 387 aa16.39■□□□□ 0.21
CALD1-207ENST00000430085 PCDHA4Q9UN74 947 aa16.39■□□□□ 0.21
CALD1-207ENST00000430085 FAM205CA6NFA0 338 aa16.39■□□□□ 0.21
CALD1-207ENST00000430085 SNHG28P0DPA3 235 aa16.39■□□□□ 0.21
CALD1-207ENST00000430085 PFKFB1P16118 471 aa16.39■□□□□ 0.21
CALD1-207ENST00000430085 TYRO3Q06418 890 aa16.39■□□□□ 0.21
CALD1-207ENST00000430085 EARS2Q5JPH6 523 aaKnown RBP16.39■□□□□ 0.21
CALD1-207ENST00000430085 GALNT17Q6IS24 598 aa16.39■□□□□ 0.21
CALD1-207ENST00000430085 TMEM179Q6ZVK1 233 aa16.39■□□□□ 0.21
CALD1-207ENST00000430085 MTMR14Q8NCE2 650 aa16.39■□□□□ 0.21
CALD1-207ENST00000430085 VEZTQ9HBM0 779 aa16.39■□□□□ 0.21
CALD1-207ENST00000430085 VAT1LQ9HCJ6 419 aa16.39■□□□□ 0.21
CALD1-207ENST00000430085 STXBP3O00186 592 aa16.38■□□□□ 0.21
CALD1-207ENST00000430085 BMP15O95972 392 aa16.38■□□□□ 0.21
CALD1-207ENST00000430085 ABCB5Q2M3G0 1257 aa16.38■□□□□ 0.21
CALD1-207ENST00000430085 PIK3AP1Q6ZUJ8 805 aa16.38■□□□□ 0.21
CALD1-207ENST00000430085 FAM151AQ8WW52 585 aa16.38■□□□□ 0.21
CALD1-207ENST00000430085 SDF4Q9BRK5 362 aa16.38■□□□□ 0.21
CALD1-207ENST00000430085 UBA5Q9GZZ9 404 aa16.38■□□□□ 0.21
CALD1-207ENST00000430085 HERC5Q9UII4 1024 aaKnown RBP16.38■□□□□ 0.21
CALD1-207ENST00000430085 MYH4Q9Y623 1939 aa16.38■□□□□ 0.21
CALD1-207ENST00000430085 TRAPPC10P48553 1259 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 ZNF543Q08ER8 600 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 CCDC173Q0VFZ6 552 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 CCDC96Q2M329 555 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 GPATCH4Q5T3I0 446 aaKnown RBP16.37■□□□□ 0.21
CALD1-207ENST00000430085 RBM26Q5T8P6 1007 aaKnown RBP16.37■□□□□ 0.21
CALD1-207ENST00000430085 CLIC6Q96NY7 704 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 RIOX1Q9H6W3 641 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.37■□□□□ 0.213e-13■■■■■ 29.2
CALD1-207ENST00000430085 GPCPD1Q9NPB8 672 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 NYAP2Q9P242 653 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 ZNF202O95125 648 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 GDF11O95390 407 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 EEF2P13639 858 aaKnown RBP16.37■□□□□ 0.21
CALD1-207ENST00000430085 SYKP43405 635 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 NAPAP54920 295 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 ICA1Q05084 483 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 UVSSAQ2YD98 709 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 TTC38Q5R3I4 469 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 FKBP1CQ5VVH2 108 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 RESP18Q5W5W9 173 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 SHC4Q6S5L8 630 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 DAGLBQ8NCG7 672 aa16.37■□□□□ 0.21
CALD1-207ENST00000430085 PIGSQ96S52 555 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms