RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 NRBF2Q96F24 287 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 BMP2KQ9NSY1 1161 aaPredicted RBP8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 KDM1AO60341 852 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 ERCC5P28715 1186 aaPredicted RBP8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 CATIPQ7Z7H3 387 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 MIEF2Q96C03 454 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 GRAMD1AQ96CP6 724 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 SPZ1Q9BXG8 430 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 CBX8Q9HC52 389 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 SPTLC2O15270 562 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 CLTAP09496 248 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 IMPDH2P12268 514 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 HAND2P61296 217 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 AMPD3Q01432 767 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 HAUS8Q9BT25 410 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 WWC3Q9ULE0 1092 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 ABCC4O15439 1325 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 STRNO43815 780 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 ZWINTO95229 277 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 GNGT1P63211 74 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 ARHGEF28Q8N1W1 1705 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 ZNF513Q8N8E2 541 aaPredicted RBP8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 BBOF1Q8ND07 529 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 KIFAP3Q92845 792 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 NOX5Q96PH1 765 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 KLHDC4Q8TBB5 520 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 ARHGEF10O15013 1369 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 MTA1Q13330 715 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 CASP8Q14790 479 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 KRT72Q14CN4 511 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 E2F4Q16254 413 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 TSHZ1Q6ZSZ6 1077 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 CROCCP3Q8IVE0 287 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 MAGEF1Q9HAY2 307 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 TTC21AQ8NDW8 1320 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 CCDC162PA2VCL2 907 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 TNIP1Q15025 636 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 CCDC178Q5BJE1 867 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 SOGA3Q5TF21 947 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 MSANTD4Q8NCY6 345 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 PPP2R5BQ15173 497 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 ARHGEF25Q86VW2 580 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 ALG1Q9BT22 464 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 CSRNP2Q9H175 543 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 EIF3HO15372 352 aaKnown RBP eCLIP8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 C6orf118Q5T5N4 469 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 ZC4H2Q9NQZ6 224 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 IPO5O00410 1097 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 POTEJP0CG39 1038 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 HIC2Q96JB3 615 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 SLC26A6Q9BXS9 759 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 BAIAP2L1Q9UHR4 511 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 KRT24Q2M2I5 525 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 RAB3IL1Q8TBN0 382 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 SEC63Q9UGP8 760 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 FMN2Q9NZ56 1722 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 MAN1A2O60476 641 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 NR1I2O75469 434 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 CCT5P48643 541 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 FAM81AQ8TBF8 368 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 OPTNQ96CV9 577 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 PAPOLBQ9NRJ5 636 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 SNX14Q9Y5W7 946 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 DCTN3O75935 186 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 MYL1P05976 194 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 PECAM1P16284 738 aaPredicted RBP8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 TOM1L2Q6ZVM7 507 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 EPN3Q9H201 632 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 STARD3NLO95772 234 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 MSL3P1P0C860 447 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 ANKLE2Q86XL3 938 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 NUF2Q9BZD4 464 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 RNF41Q9H4P4 317 aaPredicted RBP8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 HACD3Q9P035 362 aa8.29□□□□□ -1.08
SYNPO2-202ENST00000429713 TMEM259Q4ZIN3 620 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 C10orf76Q5T2E6 689 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 FBXO31Q5XUX0 539 aaPredicted RBP8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 CUL5Q93034 780 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 SEPT10Q9P0V9 454 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 A0A1B0GVL5 298 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 PSMC4P43686 418 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 WDR93Q6P2C0 686 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 RMI1Q9H9A7 625 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 KLF18A0A0U1RQI7 1052 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 AKR1B10O60218 316 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 CBFA2T3O75081 653 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 CLCN2P51788 898 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 PREPLQ4J6C6 727 aaPredicted RBP8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 MFSD6Q6ZSS7 791 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 NYAP1Q6ZVC0 841 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 CDC37L1Q7L3B6 337 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 B4GALNT2Q8NHY0 566 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 TBC1D23Q9NUY8 699 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 WDR37Q9Y2I8 494 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 GMEB1Q9Y692 573 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 FLT4P35916 1363 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 NT5C2P49902 561 aa8.28□□□□□ -1.08
SYNPO2-202ENST00000429713 ZBTB41Q5SVQ8 909 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms