RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 PPFIBP1Q86W92 1011 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 TNFRSF25Q93038 417 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 FERMT2Q96AC1 680 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 CCDC34Q96HJ3 373 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 SLC4A9Q96Q91 983 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 NACAP1Q9BZK3 213 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 RNF41Q9H4P4 317 aaPredicted RBP9.98□□□□□ -0.81
CDH13-202ENST00000428848 LZTFL1Q9NQ48 299 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 LIMA1Q9UHB6 759 aaKnown RBP9.98□□□□□ -0.81
CDH13-202ENST00000428848 JRKLQ9Y4A0 524 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 SLC4A4Q9Y6R1 1079 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 A0A0G2JS52 829 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 ERICH2A1L162 156 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 WNT7AO00755 349 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 PRPF3O43395 683 aaKnown RBP9.98□□□□□ -0.81
CDH13-202ENST00000428848 KIF5CO60282 957 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 BMP15O95972 392 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 KCNA4P22459 653 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 CASP14P31944 242 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 CRKLP46109 303 aaKnown RBP9.98□□□□□ -0.81
CDH13-202ENST00000428848 NPY5RQ15761 445 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 E2F4Q16254 413 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 RRP12Q5JTH9 1297 aaKnown RBP9.98□□□□□ -0.81
CDH13-202ENST00000428848 CLEC4GQ6UXB4 293 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 CNGA4Q8IV77 575 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 CCDC82Q8N4S0 544 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 HELBQ8NG08 1087 aaPredicted RBP9.98□□□□□ -0.81
CDH13-202ENST00000428848 SYMPKQ92797 1274 aaKnown RBP9.98□□□□□ -0.81
CDH13-202ENST00000428848 ADAM21Q9UKJ8 722 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 TTF2Q9UNY4 1162 aaKnown RBP9.98□□□□□ -0.81
CDH13-202ENST00000428848 RTL9Q8NET4 1388 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 ZNF831Q5JPB2 1677 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 CASP1P29466 404 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 ARHGAP25P42331 645 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 AFMP43652 599 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 TDO2P48775 406 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 FXR1P51114 621 aaKnown RBP eCLIP9.97□□□□□ -0.81
CDH13-202ENST00000428848 STX17P56962 302 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 ERVK-24P63145 666 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 PPARAQ07869 468 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 TMTC1Q8IUR5 882 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 PNKPQ96T60 521 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 CDC5LQ99459 802 aaKnown RBP9.97□□□□□ -0.81
CDH13-202ENST00000428848 MYO1AQ9UBC5 1043 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 L1RE1Q9UN81 338 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 BAZ2AQ9UIF9 1905 aaKnown RBP9.97□□□□□ -0.81
CDH13-202ENST00000428848 SNAP23O00161 211 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 ATP2B1P20020 1258 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 KRT2P35908 639 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 LMAN1P49257 510 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 GYS2P54840 703 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 AMPD2Q01433 879 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 CACNA1SQ13698 1873 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 FILIP1LQ4L180 1135 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 ZNF569Q5MCW4 686 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 KLHL10Q6JEL2 608 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 INTS5Q6P9B9 1019 aaKnown RBP9.97□□□□□ -0.81
CDH13-202ENST00000428848 SUGP1Q8IWZ8 645 aaKnown RBP9.97□□□□□ -0.81
CDH13-202ENST00000428848 SLC35F6Q8N357 371 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 NUP133Q8WUM0 1156 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 PPM1EQ8WY54 764 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 DUOX1Q9NRD9 1551 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 VPS54Q9P1Q0 977 aa9.97□□□□□ -0.81
CDH13-202ENST00000428848 TNKSO95271 1327 aa9.96□□□□□ -0.81
CDH13-202ENST00000428848 XDHP47989 1333 aa9.96□□□□□ -0.81
CDH13-202ENST00000428848 RNF225M0QZC1 329 aaPredicted RBP9.96□□□□□ -0.82
CDH13-202ENST00000428848 FGRP09769 529 aa9.96□□□□□ -0.82
CDH13-202ENST00000428848 ATP2C1P98194 919 aaPredicted RBP9.96□□□□□ -0.82
CDH13-202ENST00000428848 KRT31Q15323 416 aa9.96□□□□□ -0.82
CDH13-202ENST00000428848 SMYD4Q8IYR2 804 aaPredicted RBP9.96□□□□□ -0.82
CDH13-202ENST00000428848 CPLX3Q8WVH0 158 aa9.96□□□□□ -0.82
CDH13-202ENST00000428848 ZBTB9Q96C00 473 aa9.96□□□□□ -0.82
CDH13-202ENST00000428848 MKRN1Q9UHC7 482 aaKnown RBP9.96□□□□□ -0.82
CDH13-202ENST00000428848 CTAGE9A4FU28 777 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 ABL1P00519 1130 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 XBP1P17861 261 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 VPS72Q15906 364 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 WHAMMP3Q1A5X7 153 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 PDXDC2PQ6P474 469 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 HDXQ7Z353 690 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 MARCH10Q8NA82 808 aaPredicted RBP9.95□□□□□ -0.82
CDH13-202ENST00000428848 ACRBPQ8NEB7 543 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 MTRQ99707 1265 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 UBAC1Q9BSL1 405 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 DEF6Q9H4E7 631 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 ZSWIM4Q9H7M6 989 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 ABCB6Q9NP58 842 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 TOMM22Q9NS69 142 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 ABHD10Q9NUJ1 306 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 PUF60Q9UHX1 559 aaKnown RBP9.95□□□□□ -0.82
CDH13-202ENST00000428848 RWDD2AQ9UIY3 292 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 A0A1B0GUL6 1792 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 LAMB2P55268 1798 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 LOC102724159A0A0B4J2E5 919 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 CAMTA2O94983 1202 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 CPP00450 1065 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 MYCNP04198 464 aaPredicted RBP9.95□□□□□ -0.82
CDH13-202ENST00000428848 COPB1P53618 953 aaKnown RBP9.95□□□□□ -0.82
CDH13-202ENST00000428848 TRIM14Q14142 442 aa9.95□□□□□ -0.82
CDH13-202ENST00000428848 PWP2Q15269 919 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms