RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 CYTH3O43739 400 aa12.59□□□□□ -0.39
CRIM1-204ENST00000428774 NDUFB10O96000 172 aa12.59□□□□□ -0.39
CRIM1-204ENST00000428774 SSRP1Q08945 709 aaKnown RBP12.59□□□□□ -0.39
CRIM1-204ENST00000428774 CCDC96Q2M329 555 aa12.59□□□□□ -0.39
CRIM1-204ENST00000428774 KIAA1755Q5JYT7 1200 aa12.59□□□□□ -0.39
CRIM1-204ENST00000428774 FOXD4L5Q5VV16 416 aaPredicted RBP12.59□□□□□ -0.39
CRIM1-204ENST00000428774 LARP1BQ659C4 914 aaKnown RBP12.59□□□□□ -0.39
CRIM1-204ENST00000428774 SLFN13Q68D06 897 aa12.59□□□□□ -0.39
CRIM1-204ENST00000428774 DCAF4Q8WV16 495 aa12.59□□□□□ -0.39
CRIM1-204ENST00000428774 FOXD4L4Q8WXT5 416 aaPredicted RBP12.59□□□□□ -0.39
CRIM1-204ENST00000428774 ZKSCAN4Q969J2 545 aaPredicted RBP12.59□□□□□ -0.39
CRIM1-204ENST00000428774 ALG1Q9BT22 464 aa12.59□□□□□ -0.39
CRIM1-204ENST00000428774 TMX2Q9Y320 296 aa12.59□□□□□ -0.39
CRIM1-204ENST00000428774 SNCAIPQ9Y6H5 919 aa12.59□□□□□ -0.39
CRIM1-204ENST00000428774 A0A0G2JMZ2 1700 aa12.59□□□□□ -0.39
CRIM1-204ENST00000428774 hCG_1642624A0A1W2PR95 340 aa12.58□□□□□ -0.4
CRIM1-204ENST00000428774 KLRF2D3W0D1 207 aa12.58□□□□□ -0.4
CRIM1-204ENST00000428774 F5H6K3 240 aa12.58□□□□□ -0.4
CRIM1-204ENST00000428774 PRPF3O43395 683 aaKnown RBP12.58□□□□□ -0.4
CRIM1-204ENST00000428774 DEXIO95424 95 aa12.58□□□□□ -0.4
CRIM1-204ENST00000428774 PDCP20941 246 aa12.58□□□□□ -0.4
CRIM1-204ENST00000428774 GNAQP50148 359 aa12.58□□□□□ -0.4
CRIM1-204ENST00000428774 KLRC3Q07444 240 aa12.58□□□□□ -0.4
CRIM1-204ENST00000428774 ZYXQ15942 572 aaKnown RBP12.58□□□□□ -0.4
CRIM1-204ENST00000428774 PKN1Q16512 942 aa12.58□□□□□ -0.4
CRIM1-204ENST00000428774 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.58□□□□□ -0.4
CRIM1-204ENST00000428774 TRIM22Q8IYM9 498 aa12.58□□□□□ -0.4
CRIM1-204ENST00000428774 SHISA4Q96DD7 197 aa12.58□□□□□ -0.4
CRIM1-204ENST00000428774 NUP88Q99567 741 aaPredicted RBP12.58□□□□□ -0.4
CRIM1-204ENST00000428774 SPZ1Q9BXG8 430 aa12.58□□□□□ -0.4
CRIM1-204ENST00000428774 VCPKMTQ9H867 229 aa12.58□□□□□ -0.4
CRIM1-204ENST00000428774 GPCPD1Q9NPB8 672 aa12.58□□□□□ -0.4
CRIM1-204ENST00000428774 GJB4Q9NTQ9 266 aa12.58□□□□□ -0.4
CRIM1-204ENST00000428774 KIF3AQ9Y496 699 aa12.58□□□□□ -0.4
CRIM1-204ENST00000428774 RLFQ13129 1914 aa12.58□□□□□ -0.4
CRIM1-204ENST00000428774 WDR33Q9C0J8 1336 aaKnown RBP12.58□□□□□ -0.4
CRIM1-204ENST00000428774 RAD21O60216 631 aa12.57□□□□□ -0.4
CRIM1-204ENST00000428774 F13A1P00488 732 aa12.57□□□□□ -0.4
CRIM1-204ENST00000428774 ZSCAN22P10073 491 aaPredicted RBP12.57□□□□□ -0.4
CRIM1-204ENST00000428774 PTPRAP18433 802 aa12.57□□□□□ -0.4
CRIM1-204ENST00000428774 NF2P35240 595 aa12.57□□□□□ -0.4
CRIM1-204ENST00000428774 GUCY1B3Q02153 619 aa12.57□□□□□ -0.4
CRIM1-204ENST00000428774 VGLL4Q14135 290 aa12.57□□□□□ -0.4
CRIM1-204ENST00000428774 TTLL12Q14166 644 aaPredicted RBP12.57□□□□□ -0.4
CRIM1-204ENST00000428774 OTUD7BQ6GQQ9 843 aa12.57□□□□□ -0.4
CRIM1-204ENST00000428774 TTBK2Q6IQ55 1244 aa12.57□□□□□ -0.4
CRIM1-204ENST00000428774 KCTD1Q719H9 257 aa12.57□□□□□ -0.4
CRIM1-204ENST00000428774 TNPO1Q92973 898 aaKnown RBP12.57□□□□□ -0.4
CRIM1-204ENST00000428774 GMCL1Q96IK5 515 aa12.57□□□□□ -0.4
CRIM1-204ENST00000428774 CLMNQ96JQ2 1002 aa12.57□□□□□ -0.4
CRIM1-204ENST00000428774 C8orf76Q96K31 380 aa12.57□□□□□ -0.4
CRIM1-204ENST00000428774 FEZ1Q99689 392 aa12.57□□□□□ -0.4
CRIM1-204ENST00000428774 LZTS2Q9BRK4 669 aa12.57□□□□□ -0.4
CRIM1-204ENST00000428774 UBA5Q9GZZ9 404 aa12.57□□□□□ -0.4
CRIM1-204ENST00000428774 SH2D4AQ9H788 454 aa12.57□□□□□ -0.4
CRIM1-204ENST00000428774 GBA2Q9HCG7 927 aaPredicted RBP12.57□□□□□ -0.4
CRIM1-204ENST00000428774 GOPCQ9HD26 462 aa12.57□□□□□ -0.4
CRIM1-204ENST00000428774 COL11A1P12107 1806 aaPredicted RBP12.57□□□□□ -0.4
CRIM1-204ENST00000428774 SLC1A4P43007 532 aa12.56□□□□□ -0.4
CRIM1-204ENST00000428774 C1QTNF8P60827 252 aa12.56□□□□□ -0.4
CRIM1-204ENST00000428774 RESTQ13127 1097 aa12.56□□□□□ -0.4
CRIM1-204ENST00000428774 DGKZQ13574 1117 aa12.56□□□□□ -0.4
CRIM1-204ENST00000428774 MAP3K11Q16584 847 aa12.56□□□□□ -0.4
CRIM1-204ENST00000428774 GPATCH4Q5T3I0 446 aaKnown RBP12.56□□□□□ -0.4
CRIM1-204ENST00000428774 SPICE1Q8N0Z3 855 aa12.56□□□□□ -0.4
CRIM1-204ENST00000428774 PIBF1Q8WXW3 757 aa12.56□□□□□ -0.4
CRIM1-204ENST00000428774 KIAA1683Q9H0B3 1180 aa12.56□□□□□ -0.4
CRIM1-204ENST00000428774 RIOX1Q9H6W3 641 aa12.56□□□□□ -0.4
CRIM1-204ENST00000428774 PICK1Q9NRD5 415 aa12.56□□□□□ -0.4
CRIM1-204ENST00000428774 TCHHQ07283 1943 aa12.55□□□□□ -0.4
CRIM1-204ENST00000428774 BAZ2BQ9UIF8 2168 aaKnown RBP12.55□□□□□ -0.4
CRIM1-204ENST00000428774 PPP1R12BO60237 982 aaPredicted RBP12.55□□□□□ -0.4
CRIM1-204ENST00000428774 BMP3P12645 472 aa12.55□□□□□ -0.4
CRIM1-204ENST00000428774 SCG2P13521 617 aa12.55□□□□□ -0.4
CRIM1-204ENST00000428774 SMARCA1P28370 1054 aa12.55□□□□□ -0.4
CRIM1-204ENST00000428774 SLC16A2P36021 539 aa12.55□□□□□ -0.4
CRIM1-204ENST00000428774 IREB2P48200 963 aaKnown RBP12.55□□□□□ -0.4
CRIM1-204ENST00000428774 APLP1P51693 650 aa12.55□□□□□ -0.4
CRIM1-204ENST00000428774 MAP3K9P80192 1104 aa12.55□□□□□ -0.4
CRIM1-204ENST00000428774 AKAP17AQ02040 695 aaKnown RBP12.55□□□□□ -0.4
CRIM1-204ENST00000428774 MTMR2Q13614 643 aa12.55□□□□□ -0.4
CRIM1-204ENST00000428774 PFKFB3Q16875 520 aaPredicted RBP12.55□□□□□ -0.4
CRIM1-204ENST00000428774 FAM83BQ5T0W9 1011 aa12.55□□□□□ -0.4
CRIM1-204ENST00000428774 KRT40Q6A162 431 aa12.55□□□□□ -0.4
CRIM1-204ENST00000428774 FERMT3Q86UX7 667 aa12.55□□□□□ -0.4
CRIM1-204ENST00000428774 CNKSR2Q8WXI2 1034 aa12.55□□□□□ -0.4
CRIM1-204ENST00000428774 WASF1Q92558 559 aa12.55□□□□□ -0.4
CRIM1-204ENST00000428774 GPKOWQ92917 476 aaPredicted RBP eCLIP12.55□□□□□ -0.4
CRIM1-204ENST00000428774 CHAMP1Q96JM3 812 aa12.55□□□□□ -0.4
CRIM1-204ENST00000428774 PIGSQ96S52 555 aa12.55□□□□□ -0.4
CRIM1-204ENST00000428774 WDR18Q9BV38 432 aa12.55□□□□□ -0.4
CRIM1-204ENST00000428774 AS3MTQ9HBK9 375 aa12.55□□□□□ -0.4
CRIM1-204ENST00000428774 VPS54Q9P1Q0 977 aa12.55□□□□□ -0.4
CRIM1-204ENST00000428774 RBM27Q9P2N5 1060 aaKnown RBP12.55□□□□□ -0.4
CRIM1-204ENST00000428774 ISY1Q9ULR0 285 aaKnown RBP12.55□□□□□ -0.4
CRIM1-204ENST00000428774 V9GY48 417 aaPredicted RBP12.55□□□□□ -0.4
CRIM1-204ENST00000428774 TMEM88BA6NKF7 163 aa12.54□□□□□ -0.4
CRIM1-204ENST00000428774 H3BQV1 296 aa12.54□□□□□ -0.4
CRIM1-204ENST00000428774 IFFO2Q5TF58 517 aa12.54□□□□□ -0.4
CRIM1-204ENST00000428774 WWC2Q6AWC2 1192 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms