RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 MAP2K5Q13163 448 aa11.26□□□□□ -0.61
TRIM39-208ENST00000428555 TMEM132BQ14DG7 1078 aa11.26□□□□□ -0.61
TRIM39-208ENST00000428555 ZNF589Q86UQ0 364 aaPredicted RBP11.26□□□□□ -0.61
TRIM39-208ENST00000428555 MB21D1Q8N884 522 aa11.26□□□□□ -0.61
TRIM39-208ENST00000428555 ADAMTS5Q9UNA0 930 aa11.26□□□□□ -0.61
TRIM39-208ENST00000428555 IVNS1ABPQ9Y6Y0 642 aa11.26□□□□□ -0.61
TRIM39-208ENST00000428555 NAV1Q8NEY1 1877 aa11.25□□□□□ -0.61
TRIM39-208ENST00000428555 BAZ2AQ9UIF9 1905 aaKnown RBP11.25□□□□□ -0.61
TRIM39-208ENST00000428555 TTLL1O95922 423 aa11.25□□□□□ -0.61
TRIM39-208ENST00000428555 NDUFB10O96000 172 aa11.25□□□□□ -0.61
TRIM39-208ENST00000428555 ERCC3P19447 782 aa11.25□□□□□ -0.61
TRIM39-208ENST00000428555 CACNB2Q08289 660 aaPredicted RBP11.25□□□□□ -0.61
TRIM39-208ENST00000428555 CWC27Q6UX04 472 aaKnown RBP11.25□□□□□ -0.61
TRIM39-208ENST00000428555 NCAPG2Q86XI2 1143 aa11.25□□□□□ -0.61
TRIM39-208ENST00000428555 TRMT44Q8IYL2 757 aaKnown RBP11.25□□□□□ -0.61
TRIM39-208ENST00000428555 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRIM39-208ENST00000428555 HMX1Q9NP08 348 aaPredicted RBP11.25□□□□□ -0.61
TRIM39-208ENST00000428555 PAK6Q9NQU5 681 aaPredicted RBP11.25□□□□□ -0.61
TRIM39-208ENST00000428555 ANAPC4Q9UJX5 808 aa11.25□□□□□ -0.61
TRIM39-208ENST00000428555 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRIM39-208ENST00000428555 RPTORQ8N122 1335 aa11.25□□□□□ -0.61
TRIM39-208ENST00000428555 DOCK3Q8IZD9 2030 aa11.25□□□□□ -0.61
TRIM39-208ENST00000428555 VWA5AO00534 786 aa11.24□□□□□ -0.61
TRIM39-208ENST00000428555 STRNO43815 780 aa11.24□□□□□ -0.61
TRIM39-208ENST00000428555 RANBP6O60518 1105 aaKnown RBP11.24□□□□□ -0.61
TRIM39-208ENST00000428555 NMT2O60551 498 aa11.24□□□□□ -0.61
TRIM39-208ENST00000428555 PRKAR2AP13861 404 aaKnown RBP11.24□□□□□ -0.61
TRIM39-208ENST00000428555 ZKSCAN1P17029 563 aaPredicted RBP11.24□□□□□ -0.61
TRIM39-208ENST00000428555 STAT3P40763 770 aa11.24□□□□□ -0.61
TRIM39-208ENST00000428555 GRB14Q14449 540 aa11.24□□□□□ -0.61
TRIM39-208ENST00000428555 MAP3K21Q5TCX8 1036 aa11.24□□□□□ -0.61
TRIM39-208ENST00000428555 PRPF38BQ5VTL8 546 aaKnown RBP11.24□□□□□ -0.61
TRIM39-208ENST00000428555 UBE2Q1Q7Z7E8 422 aa11.24□□□□□ -0.61
TRIM39-208ENST00000428555 DPP9Q86TI2 863 aa11.24□□□□□ -0.61
TRIM39-208ENST00000428555 LRRC47Q8N1G4 583 aaKnown RBP11.24□□□□□ -0.61
TRIM39-208ENST00000428555 SHCBP1Q8NEM2 672 aa11.24□□□□□ -0.61
TRIM39-208ENST00000428555 NPLOC4Q8TAT6 608 aa11.24□□□□□ -0.61
TRIM39-208ENST00000428555 CHMP4CQ96CF2 233 aa11.24□□□□□ -0.61
TRIM39-208ENST00000428555 CRISPLD2Q9H0B8 497 aa11.24□□□□□ -0.61
TRIM39-208ENST00000428555 MROH8Q9H579 483 aa11.24□□□□□ -0.61
TRIM39-208ENST00000428555 IL17RBQ9NRM6 502 aa11.24□□□□□ -0.61
TRIM39-208ENST00000428555 FLRT1Q9NZU1 646 aa11.24□□□□□ -0.61
TRIM39-208ENST00000428555 PPP1R9AQ9ULJ8 1098 aa11.24□□□□□ -0.61
TRIM39-208ENST00000428555 TSPY2A6NKD2 308 aa11.23□□□□□ -0.61
TRIM39-208ENST00000428555 COBLO75128 1261 aa11.23□□□□□ -0.61
TRIM39-208ENST00000428555 HOXC6P09630 235 aa11.23□□□□□ -0.61
TRIM39-208ENST00000428555 FGRP09769 529 aa11.23□□□□□ -0.61
TRIM39-208ENST00000428555 ADORA2AP29274 412 aa11.23□□□□□ -0.61
TRIM39-208ENST00000428555 HAND2P61296 217 aa11.23□□□□□ -0.61
TRIM39-208ENST00000428555 RRP12Q5JTH9 1297 aaKnown RBP11.23□□□□□ -0.61
TRIM39-208ENST00000428555 SLFN13Q68D06 897 aa11.23□□□□□ -0.61
TRIM39-208ENST00000428555 PRPF38AQ8NAV1 312 aaKnown RBP11.23□□□□□ -0.61
TRIM39-208ENST00000428555 REPS2Q8NFH8 660 aa11.23□□□□□ -0.61
TRIM39-208ENST00000428555 APBA2Q99767 749 aa11.23□□□□□ -0.61
TRIM39-208ENST00000428555 SLF1Q9BQI6 1058 aa11.23□□□□□ -0.61
TRIM39-208ENST00000428555 TOMM22Q9NS69 142 aa11.23□□□□□ -0.61
TRIM39-208ENST00000428555 DIAPH3Q9NSV4 1193 aa11.23□□□□□ -0.61
TRIM39-208ENST00000428555 CCDC171Q6TFL3 1326 aa11.23□□□□□ -0.61
TRIM39-208ENST00000428555 ORC4O43929 436 aa11.22□□□□□ -0.61
TRIM39-208ENST00000428555 FARP2O94887 1054 aaPredicted RBP11.22□□□□□ -0.61
TRIM39-208ENST00000428555 SLC25A27O95847 323 aa11.22□□□□□ -0.61
TRIM39-208ENST00000428555 BMP3P12645 472 aa11.22□□□□□ -0.61
TRIM39-208ENST00000428555 MCCP23508 829 aa11.22□□□□□ -0.61
TRIM39-208ENST00000428555 CCND3P30281 292 aaPredicted RBP11.22□□□□□ -0.61
TRIM39-208ENST00000428555 CYP2C19P33261 490 aa11.22□□□□□ -0.61
TRIM39-208ENST00000428555 SLC4A3P48751 1232 aa11.22□□□□□ -0.61
TRIM39-208ENST00000428555 MFAP1P55081 439 aaKnown RBP11.22□□□□□ -0.61
TRIM39-208ENST00000428555 MFSD14CQ5VZR4 134 aa11.22□□□□□ -0.61
TRIM39-208ENST00000428555 RIOX2Q8IUF8 465 aa11.22□□□□□ -0.61
TRIM39-208ENST00000428555 GMCL1P1Q8NEA9 526 aa11.22□□□□□ -0.61
TRIM39-208ENST00000428555 DPF3Q92784 378 aa11.22□□□□□ -0.61
TRIM39-208ENST00000428555 KIFC2Q96AC6 838 aa11.22□□□□□ -0.61
TRIM39-208ENST00000428555 PAWRQ96IZ0 340 aaKnown RBP11.22□□□□□ -0.61
TRIM39-208ENST00000428555 ZNF214Q9UL59 606 aaPredicted RBP11.22□□□□□ -0.61
TRIM39-208ENST00000428555 STX8Q9UNK0 236 aa11.22□□□□□ -0.61
TRIM39-208ENST00000428555 MYH7P12883 1935 aa11.21□□□□□ -0.61
TRIM39-208ENST00000428555 TMEM232C9JQI7 657 aa11.21□□□□□ -0.61
TRIM39-208ENST00000428555 HIP1O00291 1037 aa11.21□□□□□ -0.61
TRIM39-208ENST00000428555 ZBED4O75132 1171 aa11.21□□□□□ -0.61
TRIM39-208ENST00000428555 FCER1AP12319 257 aa11.21□□□□□ -0.61
TRIM39-208ENST00000428555 GSPT1P15170 499 aaKnown RBP11.21□□□□□ -0.61
TRIM39-208ENST00000428555 CAPN2P17655 700 aa11.21□□□□□ -0.61
TRIM39-208ENST00000428555 TTC22Q5TAA0 569 aa11.21□□□□□ -0.61
TRIM39-208ENST00000428555 LHX8Q68G74 356 aa11.21□□□□□ -0.61
TRIM39-208ENST00000428555 ABRAQ8N0Z2 381 aa11.21□□□□□ -0.61
TRIM39-208ENST00000428555 CPXCR1Q8N123 301 aa11.21□□□□□ -0.61
TRIM39-208ENST00000428555 NBPF3Q9H094 633 aa11.21□□□□□ -0.61
TRIM39-208ENST00000428555 FEM1BQ9UK73 627 aa11.21□□□□□ -0.61
TRIM39-208ENST00000428555 ISY1Q9ULR0 285 aaKnown RBP11.21□□□□□ -0.61
TRIM39-208ENST00000428555 SYNPO2Q9UMS6 1093 aa11.21□□□□□ -0.61
TRIM39-208ENST00000428555 MTMR7Q9Y216 660 aa11.21□□□□□ -0.61
TRIM39-208ENST00000428555 RIPK3Q9Y572 518 aa11.21□□□□□ -0.61
TRIM39-208ENST00000428555 CEP290O15078 2479 aa11.2□□□□□ -0.62
TRIM39-208ENST00000428555 ZNF213O14771 459 aa11.2□□□□□ -0.62
TRIM39-208ENST00000428555 IGHA2P01877 340 aa11.2□□□□□ -0.62
TRIM39-208ENST00000428555 PGK2P07205 417 aa11.2□□□□□ -0.62
TRIM39-208ENST00000428555 CNGA1P29973 690 aa11.2□□□□□ -0.62
TRIM39-208ENST00000428555 MNX1P50219 401 aaPredicted RBP11.2□□□□□ -0.62
TRIM39-208ENST00000428555 PPP4R3BQ5MIZ7 849 aa11.2□□□□□ -0.62
TRIM39-208ENST00000428555 PRAMEF19Q5SWL8 479 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms