RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 PKD2L1Q9P0L9 805 aa16.95■□□□□ 0.3
SCAP-206ENST00000428413 TRIM10Q9UDY6 481 aa16.95■□□□□ 0.3
SCAP-206ENST00000428413 RTL9Q8NET4 1388 aa16.95■□□□□ 0.3
SCAP-206ENST00000428413 BMP6P22004 513 aa16.94■□□□□ 0.3
SCAP-206ENST00000428413 ZYXQ15942 572 aaKnown RBP16.94■□□□□ 0.3
SCAP-206ENST00000428413 NTRK3Q16288 839 aa16.94■□□□□ 0.3
SCAP-206ENST00000428413 LUC7L2Q9Y383 392 aaKnown RBP16.94■□□□□ 0.3
SCAP-206ENST00000428413 TRIM28Q13263 835 aaKnown RBP16.94■□□□□ 0.3
SCAP-206ENST00000428413 CNBD1Q8NA66 436 aa16.94■□□□□ 0.3
SCAP-206ENST00000428413 MFSD14BQ5SR56 506 aa16.94■□□□□ 0.3
SCAP-206ENST00000428413 FBXO2Q9UK22 296 aaPredicted RBP16.94■□□□□ 0.3
SCAP-206ENST00000428413 ZNF804BA4D1E1 1349 aa16.94■□□□□ 0.3
SCAP-206ENST00000428413 CTAGE9A4FU28 777 aa16.93■□□□□ 0.3
SCAP-206ENST00000428413 NFIXQ14938 502 aa16.93■□□□□ 0.3
SCAP-206ENST00000428413 NCAPH2Q6IBW4 605 aa16.93■□□□□ 0.3
SCAP-206ENST00000428413 BLIDQ8IZY5 108 aa16.93■□□□□ 0.3
SCAP-206ENST00000428413 RSPH14Q9UHP6 348 aa16.93■□□□□ 0.3
SCAP-206ENST00000428413 SMCO2A6NFE2 343 aa16.93■□□□□ 0.3
SCAP-206ENST00000428413 B4DLN1 442 aa16.93■□□□□ 0.3
SCAP-206ENST00000428413 PSMA7O14818 248 aa16.93■□□□□ 0.3
SCAP-206ENST00000428413 CXCR5P32302 372 aa16.93■□□□□ 0.3
SCAP-206ENST00000428413 CHMP4BP1P59074 171 aa16.93■□□□□ 0.3
SCAP-206ENST00000428413 MORC3Q14149 939 aa16.93■□□□□ 0.3
SCAP-206ENST00000428413 FAM196AQ6ZSG2 479 aa16.93■□□□□ 0.3
SCAP-206ENST00000428413 SUGCTQ9HAC7 445 aa16.93■□□□□ 0.3
SCAP-206ENST00000428413 ARHGAP23Q9P227 1491 aa16.93■□□□□ 0.3
SCAP-206ENST00000428413 KCNJ18B7U540 433 aa16.93■□□□□ 0.3
SCAP-206ENST00000428413 CD44P16070 742 aaKnown RBP16.93■□□□□ 0.3
SCAP-206ENST00000428413 KCNJ12Q14500 433 aa16.93■□□□□ 0.3
SCAP-206ENST00000428413 CCDC40Q4G0X9 1142 aa16.93■□□□□ 0.3
SCAP-206ENST00000428413 RBM43Q6ZSC3 357 aaKnown RBP16.93■□□□□ 0.3
SCAP-206ENST00000428413 DCP1AQ9NPI6 582 aaPredicted RBP16.93■□□□□ 0.3
SCAP-206ENST00000428413 RGPD2P0DJD1 1756 aa16.93■□□□□ 0.3
SCAP-206ENST00000428413 FOXP1Q9H334 677 aaPredicted RBP16.92■□□□□ 0.3
SCAP-206ENST00000428413 BMP2KQ9NSY1 1161 aaPredicted RBP16.92■□□□□ 0.3
SCAP-206ENST00000428413 SRPRBQ9Y5M8 271 aaKnown RBP16.92■□□□□ 0.3
SCAP-206ENST00000428413 A0A087X0B3 334 aa16.92■□□□□ 0.3
SCAP-206ENST00000428413 ZNF76P36508 570 aa16.92■□□□□ 0.3
SCAP-206ENST00000428413 TBC1D10BQ4KMP7 808 aaPredicted RBP16.92■□□□□ 0.3
SCAP-206ENST00000428413 MXD3Q9BW11 206 aa16.92■□□□□ 0.3
SCAP-206ENST00000428413 AGXT2Q9BYV1 514 aa16.92■□□□□ 0.3
SCAP-206ENST00000428413 MRPL44Q9H9J2 332 aaKnown RBP16.92■□□□□ 0.3
SCAP-206ENST00000428413 SPA17Q15506 151 aa16.92■□□□□ 0.3
SCAP-206ENST00000428413 USH1GQ495M9 461 aa16.92■□□□□ 0.3
SCAP-206ENST00000428413 TRAPPC3LQ5T215 181 aa16.92■□□□□ 0.3
SCAP-206ENST00000428413 ZNF34Q8IZ26 560 aa16.92■□□□□ 0.3
SCAP-206ENST00000428413 EYA3Q99504 573 aa16.92■□□□□ 0.3
SCAP-206ENST00000428413 HDAC6Q9UBN7 1215 aa16.92■□□□□ 0.3
SCAP-206ENST00000428413 FBXO3Q9UK99 471 aa16.92■□□□□ 0.3
SCAP-206ENST00000428413 CTAGE15A4D2H0 777 aa16.91■□□□□ 0.3
SCAP-206ENST00000428413 CTAGE8P0CG41 777 aa16.91■□□□□ 0.3
SCAP-206ENST00000428413 CDC25BP30305 580 aa16.91■□□□□ 0.3
SCAP-206ENST00000428413 PLCD1P51178 756 aa16.91■□□□□ 0.3
SCAP-206ENST00000428413 MAEAQ7L5Y9 396 aa16.91■□□□□ 0.3
SCAP-206ENST00000428413 CTAGE6Q86UF2 777 aa16.91■□□□□ 0.3
SCAP-206ENST00000428413 CTAGE4Q8IX94 777 aa16.91■□□□□ 0.3
SCAP-206ENST00000428413 CALML4Q96GE6 196 aa16.91■□□□□ 0.3
SCAP-206ENST00000428413 NOC4LQ9BVI4 516 aaKnown RBP16.91■□□□□ 0.3
SCAP-206ENST00000428413 AKAP12Q02952 1782 aa16.91■□□□□ 0.3
SCAP-206ENST00000428413 TYW1BQ6NUM6 668 aa16.91■□□□□ 0.3
SCAP-206ENST00000428413 GOLGA1Q92805 767 aa16.91■□□□□ 0.3
SCAP-206ENST00000428413 CHP1Q99653 195 aa16.91■□□□□ 0.3
SCAP-206ENST00000428413 SALL1Q9NSC2 1324 aa16.91■□□□□ 0.3
SCAP-206ENST00000428413 CLGNO14967 610 aa16.91■□□□□ 0.3
SCAP-206ENST00000428413 OAS2P29728 719 aaKnown RBP16.91■□□□□ 0.3
SCAP-206ENST00000428413 INTS5Q6P9B9 1019 aaKnown RBP16.91■□□□□ 0.3
SCAP-206ENST00000428413 STAG1Q8WVM7 1258 aa16.91■□□□□ 0.3
SCAP-206ENST00000428413 FAM107BQ9H098 131 aa16.91■□□□□ 0.3
SCAP-206ENST00000428413 TMEM260Q9NX78 707 aa16.91■□□□□ 0.3
SCAP-206ENST00000428413 IKBKBO14920 756 aa16.9■□□□□ 0.3
SCAP-206ENST00000428413 SLFN14P0C7P3 912 aa16.9■□□□□ 0.3
SCAP-206ENST00000428413 FXR1P51114 621 aaKnown RBP eCLIP16.9■□□□□ 0.3
SCAP-206ENST00000428413 TERF2Q15554 542 aa16.9■□□□□ 0.3
SCAP-206ENST00000428413 FCHSD1Q86WN1 690 aa16.9■□□□□ 0.3
SCAP-206ENST00000428413 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.9■□□□□ 0.3
SCAP-206ENST00000428413 CAMTA2O94983 1202 aa16.9■□□□□ 0.3
SCAP-206ENST00000428413 RPN1P04843 607 aaKnown RBP16.9■□□□□ 0.3
SCAP-206ENST00000428413 PARP1P09874 1014 aaKnown RBP16.9■□□□□ 0.3
SCAP-206ENST00000428413 CALM1P0DP23 149 aa16.9■□□□□ 0.3
SCAP-206ENST00000428413 CALM2P0DP24 149 aa16.9■□□□□ 0.3
SCAP-206ENST00000428413 CALM3P0DP25 149 aa16.9■□□□□ 0.3
SCAP-206ENST00000428413 BTDP43251 543 aa16.9■□□□□ 0.3
SCAP-206ENST00000428413 SPATA1Q5VX52 437 aa16.9■□□□□ 0.3
SCAP-206ENST00000428413 SGMS1Q86VZ5 419 aa16.9■□□□□ 0.3
SCAP-206ENST00000428413 PIGSQ96S52 555 aa16.9■□□□□ 0.3
SCAP-206ENST00000428413 MAP3K14Q99558 947 aa16.9■□□□□ 0.3
SCAP-206ENST00000428413 RNF26Q9BY78 433 aaPredicted RBP16.9■□□□□ 0.3
SCAP-206ENST00000428413 KRT31Q15323 416 aa16.9■□□□□ 0.3
SCAP-206ENST00000428413 CCDC42Q96M95 316 aa16.9■□□□□ 0.3
SCAP-206ENST00000428413 ADAMTS3O15072 1205 aa16.89■□□□□ 0.29
SCAP-206ENST00000428413 UBE2SQ16763 222 aa16.89■□□□□ 0.29
SCAP-206ENST00000428413 KCTD1Q719H9 257 aa16.89■□□□□ 0.29
SCAP-206ENST00000428413 FNBP4Q8N3X1 1017 aaPredicted RBP16.89■□□□□ 0.29
SCAP-206ENST00000428413 TCRBV5S4A2TA0A5A2 114 aa16.89■□□□□ 0.29
SCAP-206ENST00000428413 CABP7Q86V35 215 aa16.89■□□□□ 0.29
SCAP-206ENST00000428413 GSPT2Q8IYD1 628 aaKnown RBP16.89■□□□□ 0.29
SCAP-206ENST00000428413 PARD6BQ9BYG5 372 aa16.89■□□□□ 0.29
SCAP-206ENST00000428413 OSBPL5Q9H0X9 879 aaPredicted RBP16.89■□□□□ 0.29
SCAP-206ENST00000428413 SCAF8Q9UPN6 1271 aaKnown RBP16.89■□□□□ 0.29
SCAP-206ENST00000428413 MST1RQ04912 1400 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms