RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 RNF225M0QZC1 329 aaPredicted RBP17.96■□□□□ 0.47
C9orf3-206ENST00000428313 SH2B2O14492 632 aaPredicted RBP17.96■□□□□ 0.47
C9orf3-206ENST00000428313 RPS6KA3P51812 740 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 ZMYM1Q5SVZ6 1142 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 CAPRIN2Q6IMN6 1127 aaKnown RBP17.96■□□□□ 0.47
C9orf3-206ENST00000428313 BZW1Q7L1Q6 419 aaKnown RBP17.96■□□□□ 0.47
C9orf3-206ENST00000428313 LINS1Q8NG48 757 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 PURBQ96QR8 312 aaKnown RBP17.96■□□□□ 0.47
C9orf3-206ENST00000428313 CHP1Q99653 195 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 NUCKS1Q9H1E3 243 aaKnown RBP17.96■□□□□ 0.47
C9orf3-206ENST00000428313 NOD2Q9HC29 1040 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 SLC39A2Q9NP94 309 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 C5orf60A6NFR6 353 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 ZNF233A6NK53 670 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 ZNF185O15231 689 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 CDKL5O76039 1030 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 PRLRP16471 622 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 PTPREP23469 700 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 RIPK1Q13546 671 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 WASHC4Q2M389 1173 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 CREG2Q8IUH2 290 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 STK11IPQ8N1F8 1099 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 PARD3BQ8TEW8 1205 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 SPAG5Q96R06 1193 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 GPHNQ9NQX3 736 aaPredicted RBP17.96■□□□□ 0.47
C9orf3-206ENST00000428313 DBF4Q9UBU7 674 aaPredicted RBP17.96■□□□□ 0.47
C9orf3-206ENST00000428313 CORO1CQ9ULV4 474 aaPredicted RBP17.96■□□□□ 0.47
C9orf3-206ENST00000428313 C15orf41Q9Y2V0 281 aa17.96■□□□□ 0.47
C9orf3-206ENST00000428313 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.95■□□□□ 0.46
C9orf3-206ENST00000428313 N4BP3O15049 544 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 BUB1BO60566 1050 aaPredicted RBP17.95■□□□□ 0.46
C9orf3-206ENST00000428313 KRT14P02533 472 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 IDEP14735 1019 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 ITGB3BPQ13352 177 aaPredicted RBP17.95■□□□□ 0.46
C9orf3-206ENST00000428313 KCNB1Q14721 858 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 KRT31Q15323 416 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 HDAC7Q8WUI4 952 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 NSMCE1Q8WV22 266 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 DNAJC7Q99615 494 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 FBXO2Q9UK22 296 aaPredicted RBP17.95■□□□□ 0.46
C9orf3-206ENST00000428313 UBN2Q6ZU65 1347 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 ERICH2A1L162 156 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 GMNCA6NCL1 334 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 TTC36A6NLP5 189 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 SMNDC1O75940 238 aaKnown RBP eCLIP17.95■□□□□ 0.46
C9orf3-206ENST00000428313 A1BGP04217 495 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 VAV2P52735 878 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 ELF3P78545 371 aaPredicted RBP17.95■□□□□ 0.46
C9orf3-206ENST00000428313 EZH2Q15910 746 aaKnown RBP17.95■□□□□ 0.46
C9orf3-206ENST00000428313 SLC5A9Q2M3M2 681 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 ACCSLQ4AC99 568 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 ZC3H12AQ5D1E8 599 aaKnown RBP17.95■□□□□ 0.46
C9orf3-206ENST00000428313 MIS18BP1Q6P0N0 1132 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 KDM4CQ9H3R0 1056 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 SNX12Q9UMY4 172 aa17.95■□□□□ 0.46
C9orf3-206ENST00000428313 A0A0G2JLW4 131 aa17.94■□□□□ 0.46
C9orf3-206ENST00000428313 PRC1O43663 620 aa17.94■□□□□ 0.46
C9orf3-206ENST00000428313 CD44P16070 742 aaKnown RBP17.94■□□□□ 0.46
C9orf3-206ENST00000428313 PIP4K2AP48426 406 aaPredicted RBP17.94■□□□□ 0.46
C9orf3-206ENST00000428313 COPB1P53618 953 aaKnown RBP17.94■□□□□ 0.46
C9orf3-206ENST00000428313 CWF19L2Q2TBE0 894 aaKnown RBP17.94■□□□□ 0.46
C9orf3-206ENST00000428313 DDX46Q7L014 1031 aaKnown RBP17.94■□□□□ 0.46
C9orf3-206ENST00000428313 NWD1Q149M9 1564 aa17.93■□□□□ 0.46
C9orf3-206ENST00000428313 AHCYL1O43865 530 aa17.93■□□□□ 0.46
C9orf3-206ENST00000428313 AP1G2O75843 785 aa17.93■□□□□ 0.46
C9orf3-206ENST00000428313 HAUS3Q68CZ6 603 aa17.93■□□□□ 0.46
C9orf3-206ENST00000428313 MSL1Q68DK7 614 aa17.93■□□□□ 0.46
C9orf3-206ENST00000428313 MB21D2Q8IYB1 491 aaPredicted RBP17.93■□□□□ 0.46
C9orf3-206ENST00000428313 GRAMD1CQ8IYS0 662 aa17.93■□□□□ 0.46
C9orf3-206ENST00000428313 SPATA4Q8NEY3 305 aa17.93■□□□□ 0.46
C9orf3-206ENST00000428313 CCDC43Q96MW1 224 aaKnown RBP17.93■□□□□ 0.46
C9orf3-206ENST00000428313 COPRSQ9NQ92 184 aa17.93■□□□□ 0.46
C9orf3-206ENST00000428313 JADE2Q9NQC1 790 aa17.93■□□□□ 0.46
C9orf3-206ENST00000428313 SEC31BQ9NQW1 1179 aa17.93■□□□□ 0.46
C9orf3-206ENST00000428313 CDC25AP30304 524 aa17.93■□□□□ 0.46
C9orf3-206ENST00000428313 RAB27AP51159 221 aa17.93■□□□□ 0.46
C9orf3-206ENST00000428313 STX17P56962 302 aa17.93■□□□□ 0.46
C9orf3-206ENST00000428313 SPRED3Q2MJR0 410 aa17.93■□□□□ 0.46
C9orf3-206ENST00000428313 ACSBG1Q96GR2 724 aa17.93■□□□□ 0.46
C9orf3-206ENST00000428313 BORCS6Q96GS4 357 aa17.93■□□□□ 0.46
C9orf3-206ENST00000428313 NDUFB9Q9Y6M9 179 aa17.93■□□□□ 0.46
C9orf3-206ENST00000428313 PARP4Q9UKK3 1724 aaKnown RBP17.92■□□□□ 0.46
C9orf3-206ENST00000428313 NWD2Q9ULI1 1742 aa17.92■□□□□ 0.46
C9orf3-206ENST00000428313 CPDO75976 1380 aa17.92■□□□□ 0.46
C9orf3-206ENST00000428313 PPP1R3GB7ZBB8 358 aa17.92■□□□□ 0.46
C9orf3-206ENST00000428313 FESP07332 822 aa17.92■□□□□ 0.46
C9orf3-206ENST00000428313 CCT6AP40227 531 aaKnown RBP17.92■□□□□ 0.46
C9orf3-206ENST00000428313 KLHL10Q6JEL2 608 aa17.92■□□□□ 0.46
C9orf3-206ENST00000428313 CACNA2D3Q8IZS8 1091 aa17.92■□□□□ 0.46
C9orf3-206ENST00000428313 SPDYE1Q8NFV5 336 aaPredicted RBP17.92■□□□□ 0.46
C9orf3-206ENST00000428313 ZBTB10Q96DT7 871 aa17.92■□□□□ 0.46
C9orf3-206ENST00000428313 OSBPL9Q96SU4 736 aa17.92■□□□□ 0.46
C9orf3-206ENST00000428313 USP54Q70EL1 1684 aa17.92■□□□□ 0.46
C9orf3-206ENST00000428313 ROBO2Q9HCK4 1378 aa17.92■□□□□ 0.46
C9orf3-206ENST00000428313 OPLAHO14841 1288 aa17.92■□□□□ 0.46
C9orf3-206ENST00000428313 TRAPPC3O43617 180 aa17.92■□□□□ 0.46
C9orf3-206ENST00000428313 CYLC1P35663 651 aaPredicted RBP17.92■□□□□ 0.46
C9orf3-206ENST00000428313 PEX19P40855 299 aa17.92■□□□□ 0.46
C9orf3-206ENST00000428313 TRIM58Q8NG06 486 aa17.92■□□□□ 0.46
C9orf3-206ENST00000428313 SEC16BQ96JE7 1060 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms