RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 COA7Q96BR5 231 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 FAM227BQ96M60 508 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 TANGO6Q9C0B7 1094 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 SH2D4AQ9H788 454 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 MKNK2Q9HBH9 465 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 MORF4L1Q9UBU8 362 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 ATAD5Q96QE3 1844 aa11□□□□□ -0.65
RFX3-AS1-202ENST00000427722 PATL2C9JE40 543 aaKnown RBP10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 FOXP2O15409 715 aa10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 RAD21O60216 631 aa10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 PRDM1O75626 825 aa10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 EEF2P13639 858 aaKnown RBP10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 ELNP15502 786 aa10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 RASA1P20936 1047 aa10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 PDE4AP27815 886 aa10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 ERVK-9P63128 1117 aa10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 ERVK-24P63145 666 aa10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 PPARAQ07869 468 aa10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 VPS53Q5VIR6 699 aa10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 CATSPERGQ6ZRH7 1159 aa10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 SPNS2Q8IVW8 549 aa10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 CCAR1Q8IX12 1150 aaKnown RBP10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 ZNF687Q8N1G0 1237 aa10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 PTCD2Q8WV60 388 aaKnown RBP10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 KANSL2Q9H9L4 492 aa10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 BIN2Q9UBW5 565 aaPredicted RBP10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 PTPRFP10586 1907 aa10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 MYH1P12882 1939 aa10.99□□□□□ -0.65
RFX3-AS1-202ENST00000427722 SPDYE16A6NNV3 312 aaPredicted RBP10.98□□□□□ -0.65
RFX3-AS1-202ENST00000427722 NMIQ13287 307 aaPredicted RBP10.98□□□□□ -0.65
RFX3-AS1-202ENST00000427722 KIAA1755Q5JYT7 1200 aa10.98□□□□□ -0.65
RFX3-AS1-202ENST00000427722 POTEEQ6S8J3 1075 aa10.98□□□□□ -0.65
RFX3-AS1-202ENST00000427722 SIAH1Q8IUQ4 282 aa10.98□□□□□ -0.65
RFX3-AS1-202ENST00000427722 LPAR1Q92633 364 aa10.98□□□□□ -0.65
RFX3-AS1-202ENST00000427722 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.98□□□□□ -0.65
RFX3-AS1-202ENST00000427722 PORCNQ9H237 461 aa10.98□□□□□ -0.65
RFX3-AS1-202ENST00000427722 VCPKMTQ9H867 229 aa10.98□□□□□ -0.65
RFX3-AS1-202ENST00000427722 ZNF287Q9HBT7 754 aa10.98□□□□□ -0.65
RFX3-AS1-202ENST00000427722 CWC22Q9HCG8 908 aaKnown RBP10.98□□□□□ -0.65
RFX3-AS1-202ENST00000427722 HELLSQ9NRZ9 838 aa10.98□□□□□ -0.65
RFX3-AS1-202ENST00000427722 RBPJLQ9UBG7 517 aa10.98□□□□□ -0.65
RFX3-AS1-202ENST00000427722 TMX2Q9Y320 296 aa10.98□□□□□ -0.65
RFX3-AS1-202ENST00000427722 ADCY3O60266 1144 aa10.97□□□□□ -0.65
RFX3-AS1-202ENST00000427722 CNMDO75829 334 aa10.97□□□□□ -0.65
RFX3-AS1-202ENST00000427722 INHAP05111 366 aa10.97□□□□□ -0.65
RFX3-AS1-202ENST00000427722 SLC3A2P08195 630 aaKnown RBP10.97□□□□□ -0.65
RFX3-AS1-202ENST00000427722 EN2P19622 333 aaPredicted RBP10.97□□□□□ -0.65
RFX3-AS1-202ENST00000427722 UBXN2AP68543 259 aa10.97□□□□□ -0.65
RFX3-AS1-202ENST00000427722 PDE4BQ07343 736 aa10.97□□□□□ -0.65
RFX3-AS1-202ENST00000427722 IRF5Q13568 498 aa10.97□□□□□ -0.65
RFX3-AS1-202ENST00000427722 MTFR1Q15390 333 aa10.97□□□□□ -0.65
RFX3-AS1-202ENST00000427722 MCMDC2Q4G0Z9 681 aa10.97□□□□□ -0.65
RFX3-AS1-202ENST00000427722 WDR78Q5VTH9 848 aa10.97□□□□□ -0.65
RFX3-AS1-202ENST00000427722 ZNF589Q86UQ0 364 aaPredicted RBP10.97□□□□□ -0.65
RFX3-AS1-202ENST00000427722 SOCS4Q8WXH5 440 aa10.97□□□□□ -0.65
RFX3-AS1-202ENST00000427722 OSBPL3Q9H4L5 887 aa10.97□□□□□ -0.65
RFX3-AS1-202ENST00000427722 GOPCQ9HD26 462 aa10.97□□□□□ -0.65
RFX3-AS1-202ENST00000427722 RABGAP1Q9Y3P9 1069 aa10.97□□□□□ -0.65
RFX3-AS1-202ENST00000427722 CCDC171Q6TFL3 1326 aa10.96□□□□□ -0.65
RFX3-AS1-202ENST00000427722 WDR46O15213 610 aaKnown RBP10.96□□□□□ -0.65
RFX3-AS1-202ENST00000427722 FLOT1O75955 427 aa10.96□□□□□ -0.65
RFX3-AS1-202ENST00000427722 TSPY3P0CV98 308 aa10.96□□□□□ -0.65
RFX3-AS1-202ENST00000427722 TSPY8P0CW00 308 aa10.96□□□□□ -0.65
RFX3-AS1-202ENST00000427722 MAPK4P31152 587 aa10.96□□□□□ -0.65
RFX3-AS1-202ENST00000427722 CCNA1P78396 465 aa10.96□□□□□ -0.65
RFX3-AS1-202ENST00000427722 Q3C1V9 767 aa10.96□□□□□ -0.65
RFX3-AS1-202ENST00000427722 GPR142Q7Z601 462 aa10.96□□□□□ -0.65
RFX3-AS1-202ENST00000427722 ZNF444Q8N0Y2 327 aaPredicted RBP10.96□□□□□ -0.65
RFX3-AS1-202ENST00000427722 CEP95Q96GE4 821 aa10.96□□□□□ -0.65
RFX3-AS1-202ENST00000427722 DIAPH3Q9NSV4 1193 aa10.96□□□□□ -0.65
RFX3-AS1-202ENST00000427722 BTBD7Q9P203 1132 aa10.96□□□□□ -0.65
RFX3-AS1-202ENST00000427722 MYH7P12883 1935 aa10.96□□□□□ -0.66
RFX3-AS1-202ENST00000427722 IGKV6D-41A0A0C4DH26 115 aa10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 CCL5P13501 91 aa10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 SDSP20132 328 aa10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 CYP2B6P20813 491 aa10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 CTDSPL2Q05D32 466 aa10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 COG2Q14746 738 aa10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 FAM47AQ5JRC9 791 aa10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 FAM83BQ5T0W9 1011 aa10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 CWC27Q6UX04 472 aaKnown RBP10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 LBX2Q6XYB7 198 aa10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 PLEKHH3Q7Z736 793 aa10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 LRRC47Q8N1G4 583 aaKnown RBP10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 PXYLP1Q8TE99 480 aa10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 ATG4CQ96DT6 458 aa10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 NUP88Q99567 741 aaPredicted RBP10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 NUDT12Q9BQG2 462 aa10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 RNF208Q9H0X6 261 aa10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 UNC93B1Q9H1C4 597 aa10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 FBXO28Q9NVF7 368 aa10.95□□□□□ -0.66
RFX3-AS1-202ENST00000427722 PLIN4Q96Q06 1357 aa10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 BAZ2AQ9UIF9 1905 aaKnown RBP10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 NDUFB10O96000 172 aa10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 HMGCRP04035 888 aa10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 GSPT1P15170 499 aaKnown RBP10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 TFAP4Q01664 338 aa10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 PLS1Q14651 629 aa10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 TTC22Q5TAA0 569 aa10.94□□□□□ -0.66
RFX3-AS1-202ENST00000427722 TICAM2Q86XR7 235 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms