RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 MYO1BO43795 1136 aa20.79■□□□□ 0.92
AC055811.2-201ENST00000427497 KIF5BP33176 963 aa20.79■□□□□ 0.92
AC055811.2-201ENST00000427497 GRM4Q14833 912 aa20.79■□□□□ 0.92
AC055811.2-201ENST00000427497 FKBP1CQ5VVH2 108 aa20.79■□□□□ 0.92
AC055811.2-201ENST00000427497 KRT40Q6A162 431 aa20.79■□□□□ 0.92
AC055811.2-201ENST00000427497 GPT2Q8TD30 523 aa20.79■□□□□ 0.92
AC055811.2-201ENST00000427497 CCDC17Q96LX7 622 aa20.79■□□□□ 0.92
AC055811.2-201ENST00000427497 DEFB129Q9H1M3 183 aa20.79■□□□□ 0.92
AC055811.2-201ENST00000427497 FIBPO43427 364 aa20.78■□□□□ 0.92
AC055811.2-201ENST00000427497 TOP1P11387 765 aaKnown RBP20.78■□□□□ 0.92
AC055811.2-201ENST00000427497 CCDC82Q8N4S0 544 aa20.78■□□□□ 0.92
AC055811.2-201ENST00000427497 SRBD1Q8N5C6 995 aaKnown RBP20.78■□□□□ 0.92
AC055811.2-201ENST00000427497 MTMR4Q9NYA4 1195 aa20.78■□□□□ 0.92
AC055811.2-201ENST00000427497 CNTNAP5Q8WYK1 1306 aa20.78■□□□□ 0.92
AC055811.2-201ENST00000427497 CLRN2A0PK11 232 aa20.77■□□□□ 0.92
AC055811.2-201ENST00000427497 MBD3O95983 291 aa20.77■□□□□ 0.92
AC055811.2-201ENST00000427497 PKN1Q16512 942 aa20.77■□□□□ 0.92
AC055811.2-201ENST00000427497 ATL3Q6DD88 541 aa20.77■□□□□ 0.92
AC055811.2-201ENST00000427497 TATDN1Q6P1N9 297 aa20.77■□□□□ 0.92
AC055811.2-201ENST00000427497 BRAPQ7Z569 592 aa20.77■□□□□ 0.92
AC055811.2-201ENST00000427497 ZSCAN29Q8IWY8 852 aaPredicted RBP20.77■□□□□ 0.92
AC055811.2-201ENST00000427497 SCAND2PQ9GZW5 306 aaPredicted RBP20.77■□□□□ 0.92
AC055811.2-201ENST00000427497 ELP1O95163 1332 aa20.77■□□□□ 0.92
AC055811.2-201ENST00000427497 GADD45BO75293 160 aaPredicted RBP20.77■□□□□ 0.91
AC055811.2-201ENST00000427497 CSRNP1Q96S65 589 aa20.77■□□□□ 0.91
AC055811.2-201ENST00000427497 SAGE1Q9NXZ1 904 aa20.77■□□□□ 0.91
AC055811.2-201ENST00000427497 PPP2R3BQ9Y5P8 575 aa20.77■□□□□ 0.91
AC055811.2-201ENST00000427497 SLURP2P0DP57 97 aa20.76■□□□□ 0.91
AC055811.2-201ENST00000427497 TRIM29Q14134 588 aa20.76■□□□□ 0.91
AC055811.2-201ENST00000427497 FAM151AQ8WW52 585 aa20.76■□□□□ 0.91
AC055811.2-201ENST00000427497 TFIP11Q9UBB9 837 aaKnown RBP20.76■□□□□ 0.91
AC055811.2-201ENST00000427497 MAD2L2Q9UI95 211 aa20.76■□□□□ 0.91
AC055811.2-201ENST00000427497 PALM3A6NDB9 673 aaPredicted RBP20.75■□□□□ 0.91
AC055811.2-201ENST00000427497 KIF28PB7ZC32 967 aa20.75■□□□□ 0.91
AC055811.2-201ENST00000427497 TCP10L2B9ZVM9 353 aa20.75■□□□□ 0.91
AC055811.2-201ENST00000427497 GNAQP50148 359 aa20.75■□□□□ 0.91
AC055811.2-201ENST00000427497 UBE2HP62256 183 aa20.75■□□□□ 0.91
AC055811.2-201ENST00000427497 AKAP17AQ02040 695 aaKnown RBP20.75■□□□□ 0.91
AC055811.2-201ENST00000427497 PRKG1Q13976 671 aa20.75■□□□□ 0.91
AC055811.2-201ENST00000427497 GSE1Q14687 1217 aa20.75■□□□□ 0.91
AC055811.2-201ENST00000427497 ARMC9Q7Z3E5 817 aa20.75■□□□□ 0.91
AC055811.2-201ENST00000427497 REM2Q8IYK8 340 aaPredicted RBP20.75■□□□□ 0.91
AC055811.2-201ENST00000427497 VEZTQ9HBM0 779 aa20.75■□□□□ 0.91
AC055811.2-201ENST00000427497 CFAP45Q9UL16 551 aa20.75■□□□□ 0.91
AC055811.2-201ENST00000427497 V9GY48 417 aaPredicted RBP20.75■□□□□ 0.91
AC055811.2-201ENST00000427497 STAG2Q8N3U4 1231 aa20.74■□□□□ 0.91
AC055811.2-201ENST00000427497 LEO1Q8WVC0 666 aaPredicted RBP20.74■□□□□ 0.91
AC055811.2-201ENST00000427497 ZNF396Q96N95 335 aaPredicted RBP20.74■□□□□ 0.91
AC055811.2-201ENST00000427497 RNF186Q9NXI6 227 aa20.74■□□□□ 0.91
AC055811.2-201ENST00000427497 SSC5DA1L4H1 1573 aa20.74■□□□□ 0.91
AC055811.2-201ENST00000427497 FAM196BA6NMK8 535 aa20.73■□□□□ 0.91
AC055811.2-201ENST00000427497 MMP1P03956 469 aa20.73■□□□□ 0.91
AC055811.2-201ENST00000427497 U2AF2P26368 475 aaKnown RBP eCLIP20.73■□□□□ 0.91
AC055811.2-201ENST00000427497 PPP4R3BQ5MIZ7 849 aa20.73■□□□□ 0.91
AC055811.2-201ENST00000427497 FAM83AQ86UY5 434 aa20.73■□□□□ 0.91
AC055811.2-201ENST00000427497 GZF1Q9H116 711 aaPredicted RBP20.73■□□□□ 0.91
AC055811.2-201ENST00000427497 TRPA1O75762 1119 aa20.73■□□□□ 0.91
AC055811.2-201ENST00000427497 TTLL1O95922 423 aa20.73■□□□□ 0.91
AC055811.2-201ENST00000427497 CERKLQ49MI3 558 aaPredicted RBP20.73■□□□□ 0.91
AC055811.2-201ENST00000427497 LDLRAD1Q5T700 205 aa20.73■□□□□ 0.91
AC055811.2-201ENST00000427497 SPATA32Q96LK8 384 aa20.73■□□□□ 0.91
AC055811.2-201ENST00000427497 LZTS2Q9BRK4 669 aa20.73■□□□□ 0.91
AC055811.2-201ENST00000427497 TRIM34Q9BYJ4 488 aa20.73■□□□□ 0.91
AC055811.2-201ENST00000427497 RBM27Q9P2N5 1060 aaKnown RBP20.73■□□□□ 0.91
AC055811.2-201ENST00000427497 HERC5Q9UII4 1024 aaKnown RBP20.73■□□□□ 0.91
AC055811.2-201ENST00000427497 MYH4Q9Y623 1939 aa20.72■□□□□ 0.91
AC055811.2-201ENST00000427497 MYSM1Q5VVJ2 828 aa20.72■□□□□ 0.91
AC055811.2-201ENST00000427497 SHISA4Q96DD7 197 aa20.72■□□□□ 0.91
AC055811.2-201ENST00000427497 USP28Q96RU2 1077 aa20.72■□□□□ 0.91
AC055811.2-201ENST00000427497 FZD1Q9UP38 647 aa20.72■□□□□ 0.91
AC055811.2-201ENST00000427497 RASA3Q14644 834 aa20.71■□□□□ 0.91
AC055811.2-201ENST00000427497 SLC35G1Q2M3R5 365 aa20.71■□□□□ 0.91
AC055811.2-201ENST00000427497 SUPT20HL1Q3ZLR7 823 aa20.71■□□□□ 0.91
AC055811.2-201ENST00000427497 CLEC10AQ8IUN9 316 aa20.71■□□□□ 0.91
AC055811.2-201ENST00000427497 ABHD8Q96I13 439 aa20.71■□□□□ 0.91
AC055811.2-201ENST00000427497 RCOR1Q9UKL0 485 aa20.71■□□□□ 0.91
AC055811.2-201ENST00000427497 hCG_1642624A0A1W2PR95 340 aa20.7■□□□□ 0.91
AC055811.2-201ENST00000427497 MPHOSPH10O00566 681 aaKnown RBP20.7■□□□□ 0.91
AC055811.2-201ENST00000427497 PARP1P09874 1014 aaKnown RBP20.7■□□□□ 0.91
AC055811.2-201ENST00000427497 SNHG28P0DPA3 235 aa20.7■□□□□ 0.91
AC055811.2-201ENST00000427497 XBP1P17861 261 aa20.7■□□□□ 0.91
AC055811.2-201ENST00000427497 SMARCA1P28370 1054 aa20.7■□□□□ 0.91
AC055811.2-201ENST00000427497 MAP3K11Q16584 847 aa20.7■□□□□ 0.91
AC055811.2-201ENST00000427497 PFKFB3Q16875 520 aaPredicted RBP20.7■□□□□ 0.91
AC055811.2-201ENST00000427497 CLIP2Q9UDT6 1046 aa20.7■□□□□ 0.91
AC055811.2-201ENST00000427497 KCNJ14Q9UNX9 436 aa20.7■□□□□ 0.91
AC055811.2-201ENST00000427497 PPP1R12BO60237 982 aaPredicted RBP20.7■□□□□ 0.9
AC055811.2-201ENST00000427497 PDHBP11177 359 aa20.7■□□□□ 0.9
AC055811.2-201ENST00000427497 SCG2P13521 617 aa20.7■□□□□ 0.9
AC055811.2-201ENST00000427497 TNFAIP1Q13829 316 aa20.7■□□□□ 0.9
AC055811.2-201ENST00000427497 SAFBQ15424 915 aaKnown RBP eCLIP20.7■□□□□ 0.9
AC055811.2-201ENST00000427497 NBPF12Q5TAG4 269 aaPredicted RBP20.7■□□□□ 0.9
AC055811.2-201ENST00000427497 CAVIN1Q6NZI2 390 aaKnown RBP20.7■□□□□ 0.9
AC055811.2-201ENST00000427497 RASGRP2Q7LDG7 609 aa20.7■□□□□ 0.9
AC055811.2-201ENST00000427497 PHF20Q9BVI0 1012 aa20.7■□□□□ 0.9
AC055811.2-201ENST00000427497 SPZ1Q9BXG8 430 aa20.7■□□□□ 0.9
AC055811.2-201ENST00000427497 FOXP1Q9H334 677 aaPredicted RBP20.7■□□□□ 0.9
AC055811.2-201ENST00000427497 RTEL1Q9NZ71 1219 aa20.7■□□□□ 0.9
AC055811.2-201ENST00000427497 NYAP2Q9P242 653 aa20.7■□□□□ 0.9
AC055811.2-201ENST00000427497 BAZ2BQ9UIF8 2168 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms