RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 PLS1Q14651 629 aa12.79□□□□□ -0.36
LINC01238-202ENST00000426962 FAM47AQ5JRC9 791 aa12.79□□□□□ -0.36
LINC01238-202ENST00000426962 FAM83BQ5T0W9 1011 aa12.79□□□□□ -0.36
LINC01238-202ENST00000426962 SAMD1Q6SPF0 538 aaPredicted RBP12.79□□□□□ -0.36
LINC01238-202ENST00000426962 SHCBP1Q8NEM2 672 aa12.79□□□□□ -0.36
LINC01238-202ENST00000426962 ATG4CQ96DT6 458 aa12.79□□□□□ -0.36
LINC01238-202ENST00000426962 CEP95Q96GE4 821 aa12.79□□□□□ -0.36
LINC01238-202ENST00000426962 APBA2Q99767 749 aa12.79□□□□□ -0.36
LINC01238-202ENST00000426962 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.79□□□□□ -0.36
LINC01238-202ENST00000426962 SYNPO2Q9UMS6 1093 aa12.79□□□□□ -0.36
LINC01238-202ENST00000426962 MYH8P13535 1937 aa12.79□□□□□ -0.36
LINC01238-202ENST00000426962 VWA5AO00534 786 aa12.78□□□□□ -0.36
LINC01238-202ENST00000426962 HOXC6P09630 235 aa12.78□□□□□ -0.36
LINC01238-202ENST00000426962 ZKSCAN1P17029 563 aaPredicted RBP12.78□□□□□ -0.36
LINC01238-202ENST00000426962 ERCC3P19447 782 aa12.78□□□□□ -0.36
LINC01238-202ENST00000426962 MFAP1P55081 439 aaKnown RBP12.78□□□□□ -0.36
LINC01238-202ENST00000426962 GRB14Q14449 540 aa12.78□□□□□ -0.36
LINC01238-202ENST00000426962 CCL14Q16627 93 aa12.78□□□□□ -0.36
LINC01238-202ENST00000426962 PPP4R3BQ5MIZ7 849 aa12.78□□□□□ -0.36
LINC01238-202ENST00000426962 MAP3K21Q5TCX8 1036 aa12.78□□□□□ -0.36
LINC01238-202ENST00000426962 UBE2Q1Q7Z7E8 422 aa12.78□□□□□ -0.36
LINC01238-202ENST00000426962 CRISPLD2Q9H0B8 497 aa12.78□□□□□ -0.36
LINC01238-202ENST00000426962 MROH8Q9H579 483 aa12.78□□□□□ -0.36
LINC01238-202ENST00000426962 INCENPQ9NQS7 918 aa12.78□□□□□ -0.36
LINC01238-202ENST00000426962 FBXO28Q9NVF7 368 aa12.78□□□□□ -0.36
LINC01238-202ENST00000426962 PPP1R9AQ9ULJ8 1098 aa12.78□□□□□ -0.36
LINC01238-202ENST00000426962 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC01238-202ENST00000426962 TSPY2A6NKD2 308 aa12.77□□□□□ -0.37
LINC01238-202ENST00000426962 HIP1O00291 1037 aa12.77□□□□□ -0.37
LINC01238-202ENST00000426962 SLC25A27O95847 323 aa12.77□□□□□ -0.37
LINC01238-202ENST00000426962 NDUFB10O96000 172 aa12.77□□□□□ -0.37
LINC01238-202ENST00000426962 FGRP09769 529 aa12.77□□□□□ -0.37
LINC01238-202ENST00000426962 PRKAR2AP13861 404 aaKnown RBP12.77□□□□□ -0.37
LINC01238-202ENST00000426962 CACNB2Q08289 660 aaPredicted RBP12.77□□□□□ -0.37
LINC01238-202ENST00000426962 TMEM132BQ14DG7 1078 aa12.77□□□□□ -0.37
LINC01238-202ENST00000426962 MFSD14CQ5VZR4 134 aa12.77□□□□□ -0.37
LINC01238-202ENST00000426962 DPP9Q86TI2 863 aa12.77□□□□□ -0.37
LINC01238-202ENST00000426962 ZNF589Q86UQ0 364 aaPredicted RBP12.77□□□□□ -0.37
LINC01238-202ENST00000426962 NCAPG2Q86XI2 1143 aa12.77□□□□□ -0.37
LINC01238-202ENST00000426962 PRPF38AQ8NAV1 312 aaKnown RBP12.77□□□□□ -0.37
LINC01238-202ENST00000426962 NUP88Q99567 741 aaPredicted RBP12.77□□□□□ -0.37
LINC01238-202ENST00000426962 CCDC171Q6TFL3 1326 aa12.77□□□□□ -0.37
LINC01238-202ENST00000426962 ORC4O43929 436 aa12.76□□□□□ -0.37
LINC01238-202ENST00000426962 RANBP6O60518 1105 aaKnown RBP12.76□□□□□ -0.37
LINC01238-202ENST00000426962 FARP2O94887 1054 aaPredicted RBP12.76□□□□□ -0.37
LINC01238-202ENST00000426962 ADORA2AP29274 412 aa12.76□□□□□ -0.37
LINC01238-202ENST00000426962 STAT3P40763 770 aa12.76□□□□□ -0.37
LINC01238-202ENST00000426962 RIOX2Q8IUF8 465 aa12.76□□□□□ -0.37
LINC01238-202ENST00000426962 ABRAQ8N0Z2 381 aa12.76□□□□□ -0.37
LINC01238-202ENST00000426962 GMCL1P1Q8NEA9 526 aa12.76□□□□□ -0.37
LINC01238-202ENST00000426962 NPLOC4Q8TAT6 608 aa12.76□□□□□ -0.37
LINC01238-202ENST00000426962 SLF1Q9BQI6 1058 aa12.76□□□□□ -0.37
LINC01238-202ENST00000426962 SLC5A4Q9NY91 659 aa12.76□□□□□ -0.37
LINC01238-202ENST00000426962 FEM1BQ9UK73 627 aa12.76□□□□□ -0.37
LINC01238-202ENST00000426962 TACC3Q9Y6A5 838 aa12.76□□□□□ -0.37
LINC01238-202ENST00000426962 PLIN4Q96Q06 1357 aa12.76□□□□□ -0.37
LINC01238-202ENST00000426962 PLXNB2O15031 1838 aa12.76□□□□□ -0.37
LINC01238-202ENST00000426962 ZMYM6O95789 1325 aa12.75□□□□□ -0.37
LINC01238-202ENST00000426962 FCER1AP12319 257 aa12.75□□□□□ -0.37
LINC01238-202ENST00000426962 PDE4AP27815 886 aa12.75□□□□□ -0.37
LINC01238-202ENST00000426962 COPB2P35606 906 aa12.75□□□□□ -0.37
LINC01238-202ENST00000426962 SLFN13Q68D06 897 aa12.75□□□□□ -0.37
LINC01238-202ENST00000426962 CWC27Q6UX04 472 aaKnown RBP12.75□□□□□ -0.37
LINC01238-202ENST00000426962 LRRC47Q8N1G4 583 aaKnown RBP12.75□□□□□ -0.37
LINC01238-202ENST00000426962 ANKLE1Q8NAG6 615 aa12.75□□□□□ -0.37
LINC01238-202ENST00000426962 REPS2Q8NFH8 660 aa12.75□□□□□ -0.37
LINC01238-202ENST00000426962 DPF3Q92784 378 aa12.75□□□□□ -0.37
LINC01238-202ENST00000426962 HTATIP2Q9BUP3 242 aa12.75□□□□□ -0.37
LINC01238-202ENST00000426962 IL17RBQ9NRM6 502 aa12.75□□□□□ -0.37
LINC01238-202ENST00000426962 DIAPH3Q9NSV4 1193 aa12.75□□□□□ -0.37
LINC01238-202ENST00000426962 FLRT1Q9NZU1 646 aa12.75□□□□□ -0.37
LINC01238-202ENST00000426962 ZNF214Q9UL59 606 aaPredicted RBP12.75□□□□□ -0.37
LINC01238-202ENST00000426962 STX8Q9UNK0 236 aa12.75□□□□□ -0.37
LINC01238-202ENST00000426962 RLFQ13129 1914 aa12.74□□□□□ -0.37
LINC01238-202ENST00000426962 GREB1LQ9C091 1923 aaPredicted RBP12.74□□□□□ -0.37
LINC01238-202ENST00000426962 COBLO75128 1261 aa12.74□□□□□ -0.37
LINC01238-202ENST00000426962 ZBED4O75132 1171 aa12.74□□□□□ -0.37
LINC01238-202ENST00000426962 PCP11498 1178 aaKnown RBP12.74□□□□□ -0.37
LINC01238-202ENST00000426962 BMP3P12645 472 aa12.74□□□□□ -0.37
LINC01238-202ENST00000426962 CCND3P30281 292 aaPredicted RBP12.74□□□□□ -0.37
LINC01238-202ENST00000426962 OLFML2BQ68BL8 750 aa12.74□□□□□ -0.37
LINC01238-202ENST00000426962 TOMM22Q9NS69 142 aa12.74□□□□□ -0.37
LINC01238-202ENST00000426962 OGDHLQ9ULD0 1010 aa12.74□□□□□ -0.37
LINC01238-202ENST00000426962 CTDP1Q9Y5B0 961 aaPredicted RBP12.74□□□□□ -0.37
LINC01238-202ENST00000426962 ZNF213O14771 459 aa12.73□□□□□ -0.37
LINC01238-202ENST00000426962 ATP2A1O14983 1001 aa12.73□□□□□ -0.37
LINC01238-202ENST00000426962 NMT2O60551 498 aa12.73□□□□□ -0.37
LINC01238-202ENST00000426962 IGHA2P01877 340 aa12.73□□□□□ -0.37
LINC01238-202ENST00000426962 FDX1P10109 184 aa12.73□□□□□ -0.37
LINC01238-202ENST00000426962 CYP2C19P33261 490 aa12.73□□□□□ -0.37
LINC01238-202ENST00000426962 SLC1A4P43007 532 aa12.73□□□□□ -0.37
LINC01238-202ENST00000426962 NOVP48745 357 aa12.73□□□□□ -0.37
LINC01238-202ENST00000426962 HAND2P61296 217 aa12.73□□□□□ -0.37
LINC01238-202ENST00000426962 KCTD2Q14681 263 aa12.73□□□□□ -0.37
LINC01238-202ENST00000426962 RRP12Q5JTH9 1297 aaKnown RBP12.73□□□□□ -0.37
LINC01238-202ENST00000426962 AKNAD1Q5T1N1 836 aa12.73□□□□□ -0.37
LINC01238-202ENST00000426962 MFSD6Q6ZSS7 791 aa12.73□□□□□ -0.37
LINC01238-202ENST00000426962 NECAB2Q7Z6G3 386 aa12.73□□□□□ -0.37
LINC01238-202ENST00000426962 CHURC1Q8WUH1 139 aa12.73□□□□□ -0.37
LINC01238-202ENST00000426962 KIFC2Q96AC6 838 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms