RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 ORC4O43929 436 aa17.22■□□□□ 0.35
NCKIPSD-205ENST00000426678 NDUFB10O96000 172 aa17.22■□□□□ 0.35
NCKIPSD-205ENST00000426678 HAND2P61296 217 aa17.22■□□□□ 0.35
NCKIPSD-205ENST00000426678 RRP12Q5JTH9 1297 aaKnown RBP17.22■□□□□ 0.35
NCKIPSD-205ENST00000426678 NKX2-3Q8TAU0 364 aa17.22■□□□□ 0.35
NCKIPSD-205ENST00000426678 MKL1Q969V6 931 aa17.22■□□□□ 0.35
NCKIPSD-205ENST00000426678 NUP88Q99567 741 aaPredicted RBP17.22■□□□□ 0.35
NCKIPSD-205ENST00000426678 APBA2Q99767 749 aa17.22■□□□□ 0.35
NCKIPSD-205ENST00000426678 MOV10L1Q9BXT6 1211 aaKnown RBP17.22■□□□□ 0.35
NCKIPSD-205ENST00000426678 SPATC1LQ9H0A9 340 aa17.22■□□□□ 0.35
NCKIPSD-205ENST00000426678 UNC93B1Q9H1C4 597 aa17.22■□□□□ 0.35
NCKIPSD-205ENST00000426678 INCENPQ9NQS7 918 aa17.22■□□□□ 0.35
NCKIPSD-205ENST00000426678 FBXO28Q9NVF7 368 aa17.22■□□□□ 0.35
NCKIPSD-205ENST00000426678 PPP1R9AQ9ULJ8 1098 aa17.22■□□□□ 0.35
NCKIPSD-205ENST00000426678 STX8Q9UNK0 236 aa17.22■□□□□ 0.35
NCKIPSD-205ENST00000426678 LAMA4Q16363 1823 aa17.21■□□□□ 0.35
NCKIPSD-205ENST00000426678 SLC15A5A6NIM6 579 aa17.21■□□□□ 0.35
NCKIPSD-205ENST00000426678 XRCC5P13010 732 aaKnown RBP17.21■□□□□ 0.35
NCKIPSD-205ENST00000426678 ZKSCAN1P17029 563 aaPredicted RBP17.21■□□□□ 0.35
NCKIPSD-205ENST00000426678 MORN1Q5T089 497 aa17.21■□□□□ 0.35
NCKIPSD-205ENST00000426678 TRMT44Q8IYL2 757 aaKnown RBP17.21■□□□□ 0.35
NCKIPSD-205ENST00000426678 GMCL1P1Q8NEA9 526 aa17.21■□□□□ 0.35
NCKIPSD-205ENST00000426678 SHCBP1Q8NEM2 672 aa17.21■□□□□ 0.35
NCKIPSD-205ENST00000426678 SLF1Q9BQI6 1058 aa17.21■□□□□ 0.35
NCKIPSD-205ENST00000426678 ISY1Q9ULR0 285 aaKnown RBP17.21■□□□□ 0.35
NCKIPSD-205ENST00000426678 COL11A1P12107 1806 aaPredicted RBP17.21■□□□□ 0.35
NCKIPSD-205ENST00000426678 GJB1P08034 283 aa17.2■□□□□ 0.34
NCKIPSD-205ENST00000426678 FGRP09769 529 aa17.2■□□□□ 0.34
NCKIPSD-205ENST00000426678 PCP11498 1178 aaKnown RBP17.2■□□□□ 0.34
NCKIPSD-205ENST00000426678 PTPREP23469 700 aa17.2■□□□□ 0.34
NCKIPSD-205ENST00000426678 MAP2K5Q13163 448 aa17.2■□□□□ 0.34
NCKIPSD-205ENST00000426678 MFSD6Q6ZSS7 791 aa17.2■□□□□ 0.34
NCKIPSD-205ENST00000426678 TRIB2Q92519 343 aa17.2■□□□□ 0.34
NCKIPSD-205ENST00000426678 USP6NLQ92738 828 aa17.2■□□□□ 0.34
NCKIPSD-205ENST00000426678 DSCC1Q9BVC3 393 aa17.2■□□□□ 0.34
NCKIPSD-205ENST00000426678 RNF41Q9H4P4 317 aaPredicted RBP17.2■□□□□ 0.34
NCKIPSD-205ENST00000426678 RAD50Q92878 1312 aa17.2■□□□□ 0.34
NCKIPSD-205ENST00000426678 VWA5AO00534 786 aa17.19■□□□□ 0.34
NCKIPSD-205ENST00000426678 ZNF213O14771 459 aa17.19■□□□□ 0.34
NCKIPSD-205ENST00000426678 ERCC3P19447 782 aa17.19■□□□□ 0.34
NCKIPSD-205ENST00000426678 AKNAD1Q5T1N1 836 aa17.19■□□□□ 0.34
NCKIPSD-205ENST00000426678 SLFN13Q68D06 897 aa17.19■□□□□ 0.34
NCKIPSD-205ENST00000426678 CENPQQ7L2Z9 268 aaPredicted RBP17.19■□□□□ 0.34
NCKIPSD-205ENST00000426678 NCAPG2Q86XI2 1143 aa17.19■□□□□ 0.34
NCKIPSD-205ENST00000426678 STAG1Q8WVM7 1258 aa17.19■□□□□ 0.34
NCKIPSD-205ENST00000426678 RUFY2Q8WXA3 655 aa17.19■□□□□ 0.34
NCKIPSD-205ENST00000426678 MROH8Q9H579 483 aa17.19■□□□□ 0.34
NCKIPSD-205ENST00000426678 ADAMTS5Q9UNA0 930 aa17.19■□□□□ 0.34
NCKIPSD-205ENST00000426678 CTDP1Q9Y5B0 961 aaPredicted RBP17.19■□□□□ 0.34
NCKIPSD-205ENST00000426678 TACC3Q9Y6A5 838 aa17.19■□□□□ 0.34
NCKIPSD-205ENST00000426678 ZNF236Q9UL36 1845 aa17.19■□□□□ 0.34
NCKIPSD-205ENST00000426678 STRNO43815 780 aa17.18■□□□□ 0.34
NCKIPSD-205ENST00000426678 NMT2O60551 498 aa17.18■□□□□ 0.34
NCKIPSD-205ENST00000426678 SLC25A27O95847 323 aa17.18■□□□□ 0.34
NCKIPSD-205ENST00000426678 GJA8P48165 433 aa17.18■□□□□ 0.34
NCKIPSD-205ENST00000426678 GRB14Q14449 540 aa17.18■□□□□ 0.34
NCKIPSD-205ENST00000426678 TMEM132BQ14DG7 1078 aa17.18■□□□□ 0.34
NCKIPSD-205ENST00000426678 TBC1D10CQ8IV04 446 aa17.18■□□□□ 0.34
NCKIPSD-205ENST00000426678 PRPF38AQ8NAV1 312 aaKnown RBP17.18■□□□□ 0.34
NCKIPSD-205ENST00000426678 U2AF1L4Q8WU68 220 aaKnown RBP17.18■□□□□ 0.34
NCKIPSD-205ENST00000426678 IL17RBQ9NRM6 502 aa17.18■□□□□ 0.34
NCKIPSD-205ENST00000426678 BMP3P12645 472 aa17.17■□□□□ 0.34
NCKIPSD-205ENST00000426678 COPB2P35606 906 aa17.17■□□□□ 0.34
NCKIPSD-205ENST00000426678 STAT3P40763 770 aa17.17■□□□□ 0.34
NCKIPSD-205ENST00000426678 TRIM32Q13049 653 aa17.17■□□□□ 0.34
NCKIPSD-205ENST00000426678 IMMTQ16891 758 aaKnown RBP17.17■□□□□ 0.34
NCKIPSD-205ENST00000426678 SHISA4Q96DD7 197 aa17.17■□□□□ 0.34
NCKIPSD-205ENST00000426678 GMCL1Q96IK5 515 aa17.17■□□□□ 0.34
NCKIPSD-205ENST00000426678 DEFB118Q96PH6 123 aa17.17■□□□□ 0.34
NCKIPSD-205ENST00000426678 NBPF3Q9H094 633 aa17.17■□□□□ 0.34
NCKIPSD-205ENST00000426678 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.17■□□□□ 0.34
NCKIPSD-205ENST00000426678 HMX1Q9NP08 348 aaPredicted RBP17.17■□□□□ 0.34
NCKIPSD-205ENST00000426678 CTNNA3Q9UI47 895 aa17.17■□□□□ 0.34
NCKIPSD-205ENST00000426678 FEM1BQ9UK73 627 aa17.17■□□□□ 0.34
NCKIPSD-205ENST00000426678 RPTORQ8N122 1335 aa17.17■□□□□ 0.34
NCKIPSD-205ENST00000426678 ZBED4O75132 1171 aa17.16■□□□□ 0.34
NCKIPSD-205ENST00000426678 SGPL1O95470 568 aa17.16■□□□□ 0.34
NCKIPSD-205ENST00000426678 PRKAR2AP13861 404 aaKnown RBP17.16■□□□□ 0.34
NCKIPSD-205ENST00000426678 CHMLP26374 656 aa17.16■□□□□ 0.34
NCKIPSD-205ENST00000426678 ADORA2AP29274 412 aa17.16■□□□□ 0.34
NCKIPSD-205ENST00000426678 SLC1A4P43007 532 aa17.16■□□□□ 0.34
NCKIPSD-205ENST00000426678 IKQ13123 557 aaPredicted RBP17.16■□□□□ 0.34
NCKIPSD-205ENST00000426678 CCL14Q16627 93 aa17.16■□□□□ 0.34
NCKIPSD-205ENST00000426678 DPP9Q86TI2 863 aa17.16■□□□□ 0.34
NCKIPSD-205ENST00000426678 RIOX2Q8IUF8 465 aa17.16■□□□□ 0.34
NCKIPSD-205ENST00000426678 ESR2Q92731 530 aa17.16■□□□□ 0.34
NCKIPSD-205ENST00000426678 KIFC2Q96AC6 838 aa17.16■□□□□ 0.34
NCKIPSD-205ENST00000426678 TEX13BQ9BXU2 312 aa17.16■□□□□ 0.34
NCKIPSD-205ENST00000426678 PAK6Q9NQU5 681 aaPredicted RBP17.16■□□□□ 0.34
NCKIPSD-205ENST00000426678 SLC5A4Q9NY91 659 aa17.16■□□□□ 0.34
NCKIPSD-205ENST00000426678 ZNF214Q9UL59 606 aaPredicted RBP17.16■□□□□ 0.34
NCKIPSD-205ENST00000426678 NEDD4P46934 1319 aa17.16■□□□□ 0.34
NCKIPSD-205ENST00000426678 TNRC18O15417 2968 aaPredicted RBP17.16■□□□□ 0.34
NCKIPSD-205ENST00000426678 PDE4DIPQ5VU43 2346 aa17.15■□□□□ 0.34
NCKIPSD-205ENST00000426678 TMEM232C9JQI7 657 aa17.15■□□□□ 0.34
NCKIPSD-205ENST00000426678 HOXC6P09630 235 aa17.15■□□□□ 0.34
NCKIPSD-205ENST00000426678 FCER1AP12319 257 aa17.15■□□□□ 0.34
NCKIPSD-205ENST00000426678 CAPN2P17655 700 aa17.15■□□□□ 0.34
NCKIPSD-205ENST00000426678 NT5C2P49902 561 aa17.15■□□□□ 0.34
NCKIPSD-205ENST00000426678 STAT2P52630 851 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms