RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 DYNLL2Q96FJ2 89 aa17.72■□□□□ 0.43
PDAP1-202ENST00000426447 DCP1AQ9NPI6 582 aaPredicted RBP17.72■□□□□ 0.43
PDAP1-202ENST00000426447 CNPY2Q9Y2B0 182 aa17.72■□□□□ 0.43
PDAP1-202ENST00000426447 WDR46O15213 610 aaKnown RBP17.71■□□□□ 0.43
PDAP1-202ENST00000426447 RAD21O60216 631 aa17.71■□□□□ 0.43
PDAP1-202ENST00000426447 AKR1A1P14550 325 aa17.71■□□□□ 0.43
PDAP1-202ENST00000426447 AKR1B1P15121 316 aa17.71■□□□□ 0.43
PDAP1-202ENST00000426447 PDE6AP16499 860 aa17.71■□□□□ 0.43
PDAP1-202ENST00000426447 DNAJB2P25686 324 aa17.71■□□□□ 0.43
PDAP1-202ENST00000426447 TJAP1Q5JTD0 557 aa17.71■□□□□ 0.43
PDAP1-202ENST00000426447 CLEC10AQ8IUN9 316 aa17.71■□□□□ 0.43
PDAP1-202ENST00000426447 NUP133Q8WUM0 1156 aa17.71■□□□□ 0.43
PDAP1-202ENST00000426447 STARD7Q9NQZ5 370 aa17.71■□□□□ 0.43
PDAP1-202ENST00000426447 EXOC6BQ9Y2D4 811 aa17.71■□□□□ 0.43
PDAP1-202ENST00000426447 ZNF532Q9HCE3 1301 aa17.71■□□□□ 0.42
PDAP1-202ENST00000426447 TAL1P17542 331 aaPredicted RBP17.7■□□□□ 0.42
PDAP1-202ENST00000426447 STAT3P40763 770 aa17.7■□□□□ 0.42
PDAP1-202ENST00000426447 RIOX2Q8IUF8 465 aa17.7■□□□□ 0.42
PDAP1-202ENST00000426447 SIAH1Q8IUQ4 282 aa17.7■□□□□ 0.42
PDAP1-202ENST00000426447 AMOTL1Q8IY63 956 aa17.7■□□□□ 0.42
PDAP1-202ENST00000426447 PPM1EQ8WY54 764 aa17.7■□□□□ 0.42
PDAP1-202ENST00000426447 BCL11AQ9H165 835 aa17.7■□□□□ 0.42
PDAP1-202ENST00000426447 ZNF576Q9H609 170 aa17.7■□□□□ 0.42
PDAP1-202ENST00000426447 DIS3Q9Y2L1 958 aaKnown RBP17.7■□□□□ 0.42
PDAP1-202ENST00000426447 ZNF236Q9UL36 1845 aa17.7■□□□□ 0.42
PDAP1-202ENST00000426447 LAMA2P24043 3122 aaKnown RBP17.7■□□□□ 0.42
PDAP1-202ENST00000426447 TNFRSF10AO00220 468 aa17.69■□□□□ 0.42
PDAP1-202ENST00000426447 GOLIM4O00461 696 aa17.69■□□□□ 0.42
PDAP1-202ENST00000426447 ACLYP53396 1101 aa17.69■□□□□ 0.42
PDAP1-202ENST00000426447 FAAP100Q0VG06 881 aa17.69■□□□□ 0.42
PDAP1-202ENST00000426447 ZNF792Q3KQV3 632 aa17.69■□□□□ 0.42
PDAP1-202ENST00000426447 CCDC129Q6ZRS4 1044 aa17.69■□□□□ 0.42
PDAP1-202ENST00000426447 LCORLQ8N3X6 602 aa17.69■□□□□ 0.42
PDAP1-202ENST00000426447 TIFAQ96CG3 184 aa17.69■□□□□ 0.42
PDAP1-202ENST00000426447 CCDC17Q96LX7 622 aa17.69■□□□□ 0.42
PDAP1-202ENST00000426447 TOX2Q96NM4 488 aa17.69■□□□□ 0.42
PDAP1-202ENST00000426447 DNAJC2Q99543 621 aaKnown RBP17.69■□□□□ 0.42
PDAP1-202ENST00000426447 TSEN34Q9BSV6 310 aaKnown RBP17.69■□□□□ 0.42
PDAP1-202ENST00000426447 IL1RAPL2Q9NP60 686 aa17.69■□□□□ 0.42
PDAP1-202ENST00000426447 ZNF865P0CJ78 1059 aaPredicted RBP17.68■□□□□ 0.42
PDAP1-202ENST00000426447 VCANP13611 3396 aa17.68■□□□□ 0.42
PDAP1-202ENST00000426447 ANKRD33Q7Z3H0 272 aa17.68■□□□□ 0.42
PDAP1-202ENST00000426447 VTI1AQ96AJ9 217 aa17.68■□□□□ 0.42
PDAP1-202ENST00000426447 LENG1Q96BZ8 264 aaPredicted RBP17.68■□□□□ 0.42
PDAP1-202ENST00000426447 GAS2L1Q99501 681 aaPredicted RBP17.68■□□□□ 0.42
PDAP1-202ENST00000426447 ARMT1Q9H993 441 aa17.68■□□□□ 0.42
PDAP1-202ENST00000426447 FBXO28Q9NVF7 368 aa17.68■□□□□ 0.42
PDAP1-202ENST00000426447 FAM184BQ9ULE4 1060 aa17.68■□□□□ 0.42
PDAP1-202ENST00000426447 ADAMTS5Q9UNA0 930 aa17.68■□□□□ 0.42
PDAP1-202ENST00000426447 VWA5AO00534 786 aa17.67■□□□□ 0.42
PDAP1-202ENST00000426447 TIMP1P01033 207 aa17.67■□□□□ 0.42
PDAP1-202ENST00000426447 EEF2P13639 858 aaKnown RBP17.67■□□□□ 0.42
PDAP1-202ENST00000426447 COPB2P35606 906 aa17.67■□□□□ 0.42
PDAP1-202ENST00000426447 CDK8P49336 464 aa17.67■□□□□ 0.42
PDAP1-202ENST00000426447 KCNA10Q16322 511 aa17.67■□□□□ 0.42
PDAP1-202ENST00000426447 HSP90AB4PQ58FF6 505 aa17.67■□□□□ 0.42
PDAP1-202ENST00000426447 CCDC174Q6PII3 467 aa17.67■□□□□ 0.42
PDAP1-202ENST00000426447 USP38Q8NB14 1042 aa17.67■□□□□ 0.42
PDAP1-202ENST00000426447 DDX11Q96FC9 970 aa17.67■□□□□ 0.42
PDAP1-202ENST00000426447 DDRGK1Q96HY6 314 aa17.67■□□□□ 0.42
PDAP1-202ENST00000426447 GOPCQ9HD26 462 aa17.67■□□□□ 0.42
PDAP1-202ENST00000426447 ATP8A2Q9NTI2 1148 aa17.67■□□□□ 0.42
PDAP1-202ENST00000426447 MOXD2PA6NHM9 499 aa17.66■□□□□ 0.42
PDAP1-202ENST00000426447 PRKAB2O43741 272 aa17.66■□□□□ 0.42
PDAP1-202ENST00000426447 ADAMTS4O75173 837 aa17.66■□□□□ 0.42
PDAP1-202ENST00000426447 COL9A1P20849 921 aa17.66■□□□□ 0.42
PDAP1-202ENST00000426447 SLC4A3P48751 1232 aa17.66■□□□□ 0.42
PDAP1-202ENST00000426447 CEP85Q6P2H3 762 aa17.66■□□□□ 0.42
PDAP1-202ENST00000426447 CLASRPQ8N2M8 674 aaKnown RBP17.66■□□□□ 0.42
PDAP1-202ENST00000426447 RHPN1Q8TCX5 695 aa17.66■□□□□ 0.42
PDAP1-202ENST00000426447 GLT1D1Q96MS3 346 aa17.66■□□□□ 0.42
PDAP1-202ENST00000426447 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.66■□□□□ 0.426e-7■■□□□ 11.7
PDAP1-202ENST00000426447 KANSL2Q9H9L4 492 aa17.66■□□□□ 0.42
PDAP1-202ENST00000426447 ZHX1Q9UKY1 873 aaPredicted RBP17.66■□□□□ 0.42
PDAP1-202ENST00000426447 PPP1R9AQ9ULJ8 1098 aa17.66■□□□□ 0.42
PDAP1-202ENST00000426447 TCRBV5S4A2TA0A5A2 114 aa17.65■□□□□ 0.42
PDAP1-202ENST00000426447 APBB1O00213 710 aa17.65■□□□□ 0.42
PDAP1-202ENST00000426447 IFIT2P09913 472 aaKnown RBP17.65■□□□□ 0.42
PDAP1-202ENST00000426447 PPIGQ13427 754 aaKnown RBP eCLIP17.65■□□□□ 0.426e-13■□□□□ 8.8
PDAP1-202ENST00000426447 FAM83BQ5T0W9 1011 aa17.65■□□□□ 0.42
PDAP1-202ENST00000426447 MFSD5Q6N075 450 aa17.65■□□□□ 0.42
PDAP1-202ENST00000426447 EYSQ5T1H1 3165 aa17.65■□□□□ 0.42
PDAP1-202ENST00000426447 SYNRGQ9UMZ2 1314 aa17.65■□□□□ 0.42
PDAP1-202ENST00000426447 CYP2D7A0A087X1C5 515 aa17.64■□□□□ 0.41
PDAP1-202ENST00000426447 USP17L12C9JPN9 530 aa17.64■□□□□ 0.41
PDAP1-202ENST00000426447 USP17L21D6R901 530 aa17.64■□□□□ 0.41
PDAP1-202ENST00000426447 MBD4O95243 580 aa17.64■□□□□ 0.41
PDAP1-202ENST00000426447 C12orf60Q5U649 245 aa17.64■□□□□ 0.41
PDAP1-202ENST00000426447 TMEM199Q8N511 208 aa17.64■□□□□ 0.41
PDAP1-202ENST00000426447 MSL3Q8N5Y2 521 aaKnown RBP17.64■□□□□ 0.41
PDAP1-202ENST00000426447 KLHDC9Q8NEP7 349 aa17.64■□□□□ 0.41
PDAP1-202ENST00000426447 SPC25Q9HBM1 224 aa17.64■□□□□ 0.41
PDAP1-202ENST00000426447 ZNF214Q9UL59 606 aaPredicted RBP17.64■□□□□ 0.41
PDAP1-202ENST00000426447 CTDP1Q9Y5B0 961 aaPredicted RBP17.64■□□□□ 0.41
PDAP1-202ENST00000426447 MROH7Q68CQ1 1323 aa17.64■□□□□ 0.41
PDAP1-202ENST00000426447 C6orf222P0C671 652 aaPredicted RBP17.63■□□□□ 0.41
PDAP1-202ENST00000426447 PCSK9Q8NBP7 692 aaKnown RBP17.63■□□□□ 0.41
PDAP1-202ENST00000426447 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.63■□□□□ 0.41
PDAP1-202ENST00000426447 ATXN2LQ8WWM7 1075 aaKnown RBP17.63■□□□□ 0.41
PDAP1-202ENST00000426447 PRDM12Q9H4Q4 367 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms