RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 USP40Q9NVE5 1235 aa2.61□□□□□ -1.99
PMS1-210ENST00000424307 SMPD4Q9NXE4 827 aa2.61□□□□□ -1.99
PMS1-210ENST00000424307 IVNS1ABPQ9Y6Y0 642 aa2.61□□□□□ -1.99
PMS1-210ENST00000424307 TREHO43280 583 aa2.6□□□□□ -1.99
PMS1-210ENST00000424307 TRHRP34981 398 aaPredicted RBP2.6□□□□□ -1.99
PMS1-210ENST00000424307 TGFB2P61812 414 aa2.6□□□□□ -1.99
PMS1-210ENST00000424307 NR1I3Q14994 352 aa2.6□□□□□ -1.99
PMS1-210ENST00000424307 SLC14A2Q15849 920 aa2.6□□□□□ -1.99
PMS1-210ENST00000424307 TP53I13Q8NBR0 393 aaPredicted RBP2.6□□□□□ -1.99
PMS1-210ENST00000424307 GRIN3AQ8TCU5 1115 aa2.6□□□□□ -1.99
PMS1-210ENST00000424307 RNF141Q8WVD5 230 aa2.6□□□□□ -1.99
PMS1-210ENST00000424307 ASPNQ9BXN1 380 aa2.6□□□□□ -1.99
PMS1-210ENST00000424307 PCED1AQ9H1Q7 454 aa2.6□□□□□ -1.99
PMS1-210ENST00000424307 EPB41L4AQ9HCS5 686 aaPredicted RBP2.6□□□□□ -1.99
PMS1-210ENST00000424307 BIN2Q9UBW5 565 aaPredicted RBP2.6□□□□□ -1.99
PMS1-210ENST00000424307 PNMA6FA0A0J9YX94 578 aa2.6□□□□□ -1.99
PMS1-210ENST00000424307 WTIPA6NIX2 430 aaPredicted RBP2.6□□□□□ -1.99
PMS1-210ENST00000424307 VIPR1P32241 457 aa2.6□□□□□ -1.99
PMS1-210ENST00000424307 CDR1P51861 262 aa2.6□□□□□ -1.99
PMS1-210ENST00000424307 ETF1P62495 437 aaKnown RBP2.6□□□□□ -1.99
PMS1-210ENST00000424307 PDE4BQ07343 736 aa2.6□□□□□ -1.99
PMS1-210ENST00000424307 SV2BQ7L1I2 683 aa2.6□□□□□ -1.99
PMS1-210ENST00000424307 PANK1Q8TE04 598 aa2.6□□□□□ -1.99
PMS1-210ENST00000424307 EAF1Q96JC9 268 aaPredicted RBP2.6□□□□□ -1.99
PMS1-210ENST00000424307 SGPP1Q9BX95 441 aa2.6□□□□□ -1.99
PMS1-210ENST00000424307 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
PMS1-210ENST00000424307 BCO2Q9BYV7 579 aa2.6□□□□□ -1.99
PMS1-210ENST00000424307 TNFRSF10DQ9UBN6 386 aa2.6□□□□□ -1.99
PMS1-210ENST00000424307 GNEQ9Y223 722 aaKnown RBP2.6□□□□□ -1.99
PMS1-210ENST00000424307 SH3D21A4FU49 640 aa2.59□□□□□ -1.99
PMS1-210ENST00000424307 ENC1O14682 589 aa2.59□□□□□ -1.99
PMS1-210ENST00000424307 PPFIA2O75334 1257 aa2.59□□□□□ -1.99
PMS1-210ENST00000424307 ITGB6P18564 788 aa2.59□□□□□ -1.99
PMS1-210ENST00000424307 CDK8P49336 464 aa2.59□□□□□ -1.99
PMS1-210ENST00000424307 RPS26P62854 115 aaKnown RBP2.59□□□□□ -1.99
PMS1-210ENST00000424307 TEKQ02763 1124 aa2.59□□□□□ -1.99
PMS1-210ENST00000424307 PTPN11Q06124 597 aaPredicted RBP2.59□□□□□ -1.99
PMS1-210ENST00000424307 DNAJB8Q8NHS0 232 aa2.59□□□□□ -1.99
PMS1-210ENST00000424307 PWWP2AQ96N64 755 aa2.59□□□□□ -1.99
PMS1-210ENST00000424307 C19orf44Q9H6X5 657 aa2.59□□□□□ -1.99
PMS1-210ENST00000424307 AKAP2Q9Y2D5 859 aa2.59□□□□□ -1.99
PMS1-210ENST00000424307 CSADQ9Y600 493 aa2.59□□□□□ -1.99
PMS1-210ENST00000424307 IRS2Q9Y4H2 1338 aa2.59□□□□□ -1.99
PMS1-210ENST00000424307 MAPK1P28482 360 aa2.59□□□□□ -2
PMS1-210ENST00000424307 MAPK8P45983 427 aa2.59□□□□□ -2
PMS1-210ENST00000424307 ENOX2Q16206 610 aaKnown RBP2.59□□□□□ -2
PMS1-210ENST00000424307 ADGRF1Q5T601 910 aa2.59□□□□□ -2
PMS1-210ENST00000424307 PRAMEF13Q5VWM6 474 aa2.59□□□□□ -2
PMS1-210ENST00000424307 LIPIQ6XZB0 460 aa2.59□□□□□ -2
PMS1-210ENST00000424307 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.59□□□□□ -2
PMS1-210ENST00000424307 LDHDQ86WU2 507 aa2.59□□□□□ -2
PMS1-210ENST00000424307 FBF1Q8TES7 1133 aa2.59□□□□□ -2
PMS1-210ENST00000424307 CDK5RAP1Q96SZ6 601 aaKnown RBP2.59□□□□□ -2
PMS1-210ENST00000424307 PCDH18Q9HCL0 1135 aa2.59□□□□□ -2
PMS1-210ENST00000424307 PCDHA11Q9Y5I1 949 aa2.59□□□□□ -2
PMS1-210ENST00000424307 P4HBP07237 508 aaKnown RBP2.58□□□□□ -2
PMS1-210ENST00000424307 CELA3AP09093 270 aa2.58□□□□□ -2
PMS1-210ENST00000424307 ZNF20P17024 532 aa2.58□□□□□ -2
PMS1-210ENST00000424307 TAGLNQ01995 201 aaKnown RBP2.58□□□□□ -2
PMS1-210ENST00000424307 TIGD5Q53EQ6 642 aa2.58□□□□□ -2
PMS1-210ENST00000424307 LRFN4Q6PJG9 635 aa2.58□□□□□ -2
PMS1-210ENST00000424307 CRIP3Q6Q6R5 217 aa2.58□□□□□ -2
PMS1-210ENST00000424307 TPTE2Q6XPS3 522 aa2.58□□□□□ -2
PMS1-210ENST00000424307 DTWD2Q8NBA8 298 aa2.58□□□□□ -2
PMS1-210ENST00000424307 DVL3Q92997 716 aaPredicted RBP2.58□□□□□ -2
PMS1-210ENST00000424307 Q96M66 194 aa2.58□□□□□ -2
PMS1-210ENST00000424307 FRMD6Q96NE9 622 aa2.58□□□□□ -2
PMS1-210ENST00000424307 ASCC2Q9H1I8 757 aaPredicted RBP2.58□□□□□ -2
PMS1-210ENST00000424307 FBRSQ9HAH7 460 aa2.58□□□□□ -2
PMS1-210ENST00000424307 DCTN4Q9UJW0 460 aa2.58□□□□□ -2
PMS1-210ENST00000424307 BRD1O95696 1058 aa2.57□□□□□ -2
PMS1-210ENST00000424307 AMHP03971 560 aa2.57□□□□□ -2
PMS1-210ENST00000424307 EPHB3P54753 998 aa2.57□□□□□ -2
PMS1-210ENST00000424307 CDH24Q86UP0 819 aa2.57□□□□□ -2
PMS1-210ENST00000424307 SYTL5Q8TDW5 730 aaPredicted RBP2.57□□□□□ -2
PMS1-210ENST00000424307 MAP6Q96JE9 813 aa2.57□□□□□ -2
PMS1-210ENST00000424307 TMEM87BQ96K49 555 aa2.57□□□□□ -2
PMS1-210ENST00000424307 RNF38Q9H0F5 515 aa2.57□□□□□ -2
PMS1-210ENST00000424307 ADAM7Q9H2U9 754 aa2.57□□□□□ -2
PMS1-210ENST00000424307 FMR1Q06787 632 aaKnown RBP eCLIP2.57□□□□□ -2
PMS1-210ENST00000424307 IGDCC3Q8IVU1 814 aa2.57□□□□□ -2
PMS1-210ENST00000424307 Q8N1X5 172 aa2.57□□□□□ -2
PMS1-210ENST00000424307 RBM15Q96T37 977 aaKnown RBP eCLIP2.57□□□□□ -2
PMS1-210ENST00000424307 G6PC3Q9BUM1 346 aa2.57□□□□□ -2
PMS1-210ENST00000424307 BRIP1Q9BX63 1249 aa2.57□□□□□ -2
PMS1-210ENST00000424307 PCDHA5Q9Y5H7 936 aa2.57□□□□□ -2
PMS1-210ENST00000424307 F6X3S4 739 aa2.56□□□□□ -2
PMS1-210ENST00000424307 IGFBP6P24592 240 aaPredicted RBP2.56□□□□□ -2
PMS1-210ENST00000424307 GRK4P32298 578 aa2.56□□□□□ -2
PMS1-210ENST00000424307 MAPKAPK2P49137 400 aa2.56□□□□□ -2
PMS1-210ENST00000424307 YARSP54577 528 aaKnown RBP2.56□□□□□ -2
PMS1-210ENST00000424307 RNF4P78317 190 aa2.56□□□□□ -2
PMS1-210ENST00000424307 CLEC16AQ2KHT3 1053 aa2.56□□□□□ -2
PMS1-210ENST00000424307 SAPCD2Q86UD0 394 aa2.56□□□□□ -2
PMS1-210ENST00000424307 MCATQ8IVS2 390 aaKnown RBP2.56□□□□□ -2
PMS1-210ENST00000424307 SYT8Q8NBV8 401 aa2.56□□□□□ -2
PMS1-210ENST00000424307 DAGLBQ8NCG7 672 aa2.56□□□□□ -2
PMS1-210ENST00000424307 CYB5D2Q8WUJ1 264 aa2.56□□□□□ -2
PMS1-210ENST00000424307 PLPPR2Q96GM1 343 aa2.56□□□□□ -2
PMS1-210ENST00000424307 FAM161BQ96MY7 647 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms