RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 SOX10P56693 466 aa11.78□□□□□ -0.52
NF1-203ENST00000422121 ERVK-9P63128 1117 aa11.78□□□□□ -0.52
NF1-203ENST00000422121 ERVK-24P63145 666 aa11.78□□□□□ -0.52
NF1-203ENST00000422121 TFAP4Q01664 338 aa11.78□□□□□ -0.52
NF1-203ENST00000422121 KIF22Q14807 665 aa11.78□□□□□ -0.52
NF1-203ENST00000422121 TBC1D10CQ8IV04 446 aa11.78□□□□□ -0.52
NF1-203ENST00000422121 ZNF444Q8N0Y2 327 aaPredicted RBP11.78□□□□□ -0.52
NF1-203ENST00000422121 GPRC5AQ8NFJ5 357 aa11.78□□□□□ -0.52
NF1-203ENST00000422121 SH3TC2Q8TF17 1288 aa11.78□□□□□ -0.52
NF1-203ENST00000422121 ZNF333Q96JL9 665 aa11.78□□□□□ -0.52
NF1-203ENST00000422121 BMP2KQ9NSY1 1161 aaPredicted RBP11.78□□□□□ -0.52
NF1-203ENST00000422121 MTMR4Q9NYA4 1195 aa11.78□□□□□ -0.52
NF1-203ENST00000422121 NYAP2Q9P242 653 aa11.78□□□□□ -0.52
NF1-203ENST00000422121 ADAMTS5Q9UNA0 930 aa11.78□□□□□ -0.52
NF1-203ENST00000422121 ZMYM6O95789 1325 aa11.78□□□□□ -0.52
NF1-203ENST00000422121 PLIN4Q96Q06 1357 aa11.78□□□□□ -0.52
NF1-203ENST00000422121 POTEFA5A3E0 1075 aa11.77□□□□□ -0.53
NF1-203ENST00000422121 ORC4O43929 436 aa11.77□□□□□ -0.53
NF1-203ENST00000422121 NMT2O60551 498 aa11.77□□□□□ -0.53
NF1-203ENST00000422121 PRMT2P55345 433 aa11.77□□□□□ -0.53
NF1-203ENST00000422121 FCGRTP55899 365 aa11.77□□□□□ -0.53
NF1-203ENST00000422121 HAND2P61296 217 aa11.77□□□□□ -0.53
NF1-203ENST00000422121 ATP2B2Q01814 1243 aa11.77□□□□□ -0.53
NF1-203ENST00000422121 PDE4BQ07343 736 aa11.77□□□□□ -0.53
NF1-203ENST00000422121 ARHGEF6Q15052 776 aa11.77□□□□□ -0.53
NF1-203ENST00000422121 LPAR1Q92633 364 aa11.77□□□□□ -0.53
NF1-203ENST00000422121 USP6NLQ92738 828 aa11.77□□□□□ -0.53
NF1-203ENST00000422121 ARHGEF10LQ9HCE6 1279 aa11.77□□□□□ -0.53
NF1-203ENST00000422121 FBXO28Q9NVF7 368 aa11.77□□□□□ -0.53
NF1-203ENST00000422121 CLIP2Q9UDT6 1046 aa11.77□□□□□ -0.53
NF1-203ENST00000422121 MYPNQ86TC9 1320 aa11.77□□□□□ -0.53
NF1-203ENST00000422121 PLXNB2O15031 1838 aa11.76□□□□□ -0.53
NF1-203ENST00000422121 F5H6K3 240 aa11.76□□□□□ -0.53
NF1-203ENST00000422121 TNPO2O14787 897 aaKnown RBP11.76□□□□□ -0.53
NF1-203ENST00000422121 NDUFB10O96000 172 aa11.76□□□□□ -0.53
NF1-203ENST00000422121 KLRC3Q07444 240 aa11.76□□□□□ -0.53
NF1-203ENST00000422121 COG2Q14746 738 aa11.76□□□□□ -0.53
NF1-203ENST00000422121 MTFR1Q15390 333 aa11.76□□□□□ -0.53
NF1-203ENST00000422121 CENPQQ7L2Z9 268 aaPredicted RBP11.76□□□□□ -0.53
NF1-203ENST00000422121 FBXO22Q8NEZ5 403 aa11.76□□□□□ -0.53
NF1-203ENST00000422121 SLC39A7Q92504 469 aa11.76□□□□□ -0.53
NF1-203ENST00000422121 NUP88Q99567 741 aaPredicted RBP11.76□□□□□ -0.53
NF1-203ENST00000422121 PAGR1Q9BTK6 254 aa11.76□□□□□ -0.53
NF1-203ENST00000422121 DIAPH3Q9NSV4 1193 aa11.76□□□□□ -0.53
NF1-203ENST00000422121 RABGAP1Q9Y3P9 1069 aa11.76□□□□□ -0.53
NF1-203ENST00000422121 WDR46O15213 610 aaKnown RBP11.75□□□□□ -0.53
NF1-203ENST00000422121 HOXD10P28358 340 aa11.75□□□□□ -0.53
NF1-203ENST00000422121 GRK4P32298 578 aa11.75□□□□□ -0.53
NF1-203ENST00000422121 PTH1RQ03431 593 aa11.75□□□□□ -0.53
NF1-203ENST00000422121 IRF5Q13568 498 aa11.75□□□□□ -0.53
NF1-203ENST00000422121 SLC9C1Q4G0N8 1177 aa11.75□□□□□ -0.53
NF1-203ENST00000422121 MORN1Q5T089 497 aa11.75□□□□□ -0.53
NF1-203ENST00000422121 FAM83BQ5T0W9 1011 aa11.75□□□□□ -0.53
NF1-203ENST00000422121 REPS2Q8NFH8 660 aa11.75□□□□□ -0.53
NF1-203ENST00000422121 ATG4CQ96DT6 458 aa11.75□□□□□ -0.53
NF1-203ENST00000422121 TANGO6Q9C0B7 1094 aa11.75□□□□□ -0.53
NF1-203ENST00000422121 ZNF287Q9HBT7 754 aa11.75□□□□□ -0.53
NF1-203ENST00000422121 HOXC10Q9NYD6 342 aa11.75□□□□□ -0.53
NF1-203ENST00000422121 PARP14Q460N5 1801 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 KIAA0100Q14667 2235 aaKnown RBP11.74□□□□□ -0.53
NF1-203ENST00000422121 HIP1O00291 1037 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 ADCY3O60266 1144 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 FLOT1O75955 427 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 TTLL1O95922 423 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 SLC3A2P08195 630 aaKnown RBP11.74□□□□□ -0.53
NF1-203ENST00000422121 TSPY3P0CV98 308 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 TSPY8P0CW00 308 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 C7P10643 843 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 ELNP15502 786 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 TRIM32Q13049 653 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 TMEM132BQ14DG7 1078 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 AKNAD1Q5T1N1 836 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 RCSD1Q6JBY9 416 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 RASGRP2Q7LDG7 609 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 LRRC47Q8N1G4 583 aaKnown RBP11.74□□□□□ -0.53
NF1-203ENST00000422121 RAET1EQ8TD07 263 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 STAG1Q8WVM7 1258 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 DSCC1Q9BVC3 393 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 MOV10L1Q9BXT6 1211 aaKnown RBP11.74□□□□□ -0.53
NF1-203ENST00000422121 SH2D4AQ9H788 454 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 TAF6LQ9Y6J9 622 aa11.74□□□□□ -0.53
NF1-203ENST00000422121 A0A0G2JMZ2 1700 aa11.73□□□□□ -0.53
NF1-203ENST00000422121 SGSM2O43147 1006 aa11.73□□□□□ -0.53
NF1-203ENST00000422121 RANBP6O60518 1105 aaKnown RBP11.73□□□□□ -0.53
NF1-203ENST00000422121 MYCP01106 439 aaPredicted RBP11.73□□□□□ -0.53
NF1-203ENST00000422121 IGHA2P01877 340 aa11.73□□□□□ -0.53
NF1-203ENST00000422121 EN2P19622 333 aaPredicted RBP11.73□□□□□ -0.53
NF1-203ENST00000422121 NEDD4P46934 1319 aa11.73□□□□□ -0.53
NF1-203ENST00000422121 GPR142Q7Z601 462 aa11.73□□□□□ -0.53
NF1-203ENST00000422121 GMCL1P1Q8NEA9 526 aa11.73□□□□□ -0.53
NF1-203ENST00000422121 PXYLP1Q8TE99 480 aa11.73□□□□□ -0.53
NF1-203ENST00000422121 GTF3C2Q8WUA4 911 aaPredicted RBP11.73□□□□□ -0.53
NF1-203ENST00000422121 COA7Q96BR5 231 aa11.73□□□□□ -0.53
NF1-203ENST00000422121 GOPCQ9HD26 462 aa11.73□□□□□ -0.53
NF1-203ENST00000422121 TCP11L1Q9NUJ3 509 aa11.73□□□□□ -0.53
NF1-203ENST00000422121 PPP1R9AQ9ULJ8 1098 aa11.73□□□□□ -0.53
NF1-203ENST00000422121 SYNPO2Q9UMS6 1093 aa11.73□□□□□ -0.53
NF1-203ENST00000422121 TSPY2A6NKD2 308 aa11.72□□□□□ -0.53
NF1-203ENST00000422121 VWA5AO00534 786 aa11.72□□□□□ -0.53
NF1-203ENST00000422121 ZNF213O14771 459 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms