RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 MKNK2Q9HBH9 465 aa13.59□□□□□ -0.23
NDUFA3-208ENST00000422029 CLIP2Q9UDT6 1046 aa13.59□□□□□ -0.23
NDUFA3-208ENST00000422029 ATP11BQ9Y2G3 1177 aa13.59□□□□□ -0.23
NDUFA3-208ENST00000422029 WDR46O15213 610 aaKnown RBP13.58□□□□□ -0.24
NDUFA3-208ENST00000422029 GPAA1O43292 621 aa13.58□□□□□ -0.24
NDUFA3-208ENST00000422029 TAL1P17542 331 aaPredicted RBP13.58□□□□□ -0.24
NDUFA3-208ENST00000422029 TDO2P48775 406 aa13.58□□□□□ -0.24
NDUFA3-208ENST00000422029 CPXCR1Q8N123 301 aa13.58□□□□□ -0.24
NDUFA3-208ENST00000422029 LPAR1Q92633 364 aa13.58□□□□□ -0.24
NDUFA3-208ENST00000422029 LENG1Q96BZ8 264 aaPredicted RBP13.58□□□□□ -0.24
NDUFA3-208ENST00000422029 MMP19Q99542 508 aa13.58□□□□□ -0.24
NDUFA3-208ENST00000422029 SH2D4AQ9H788 454 aa13.58□□□□□ -0.24
NDUFA3-208ENST00000422029 INCENPQ9NQS7 918 aa13.58□□□□□ -0.24
NDUFA3-208ENST00000422029 ISY1Q9ULR0 285 aaKnown RBP13.58□□□□□ -0.24
NDUFA3-208ENST00000422029 MYH7P12883 1935 aa13.58□□□□□ -0.24
NDUFA3-208ENST00000422029 FCER1AP12319 257 aa13.57□□□□□ -0.24
NDUFA3-208ENST00000422029 STAT3P40763 770 aa13.57□□□□□ -0.24
NDUFA3-208ENST00000422029 ADCYAP1R1P41586 468 aa13.57□□□□□ -0.24
NDUFA3-208ENST00000422029 FAM47AQ5JRC9 791 aa13.57□□□□□ -0.24
NDUFA3-208ENST00000422029 CCDC129Q6ZRS4 1044 aa13.57□□□□□ -0.24
NDUFA3-208ENST00000422029 LRRC47Q8N1G4 583 aaKnown RBP13.57□□□□□ -0.24
NDUFA3-208ENST00000422029 SHCBP1Q8NEM2 672 aa13.57□□□□□ -0.24
NDUFA3-208ENST00000422029 APPBP2Q92624 585 aa13.57□□□□□ -0.24
NDUFA3-208ENST00000422029 GPATCH3Q96I76 525 aa13.57□□□□□ -0.24
NDUFA3-208ENST00000422029 MROH8Q9H579 483 aa13.57□□□□□ -0.24
NDUFA3-208ENST00000422029 GOPCQ9HD26 462 aa13.57□□□□□ -0.24
NDUFA3-208ENST00000422029 ARPP21Q9UBL0 812 aaPredicted RBP13.57□□□□□ -0.24
NDUFA3-208ENST00000422029 COL11A1P12107 1806 aaPredicted RBP13.56□□□□□ -0.24
NDUFA3-208ENST00000422029 F5H6K3 240 aa13.56□□□□□ -0.24
NDUFA3-208ENST00000422029 VWA5AO00534 786 aa13.56□□□□□ -0.24
NDUFA3-208ENST00000422029 STRNO43815 780 aa13.56□□□□□ -0.24
NDUFA3-208ENST00000422029 NDUFB10O96000 172 aa13.56□□□□□ -0.24
NDUFA3-208ENST00000422029 IGHA2P01877 340 aa13.56□□□□□ -0.24
NDUFA3-208ENST00000422029 CAPN2P17655 700 aa13.56□□□□□ -0.24
NDUFA3-208ENST00000422029 RTP1P59025 263 aa13.56□□□□□ -0.24
NDUFA3-208ENST00000422029 KLRC3Q07444 240 aa13.56□□□□□ -0.24
NDUFA3-208ENST00000422029 MB21D1Q8N884 522 aa13.56□□□□□ -0.24
NDUFA3-208ENST00000422029 KIFC2Q96AC6 838 aa13.56□□□□□ -0.24
NDUFA3-208ENST00000422029 MAML3Q96JK9 1138 aa13.56□□□□□ -0.24
NDUFA3-208ENST00000422029 CRBNQ96SW2 442 aa13.56□□□□□ -0.24
NDUFA3-208ENST00000422029 FSD1Q9BTV5 496 aa13.56□□□□□ -0.24
NDUFA3-208ENST00000422029 PRDM5Q9NQX1 630 aaPredicted RBP13.56□□□□□ -0.24
NDUFA3-208ENST00000422029 PPP1R9AQ9ULJ8 1098 aa13.56□□□□□ -0.24
NDUFA3-208ENST00000422029 MTMR7Q9Y216 660 aa13.56□□□□□ -0.24
NDUFA3-208ENST00000422029 RIPK3Q9Y572 518 aa13.56□□□□□ -0.24
NDUFA3-208ENST00000422029 FRMPD3Q5JV73 1810 aa13.55□□□□□ -0.24
NDUFA3-208ENST00000422029 PGK1P00558 417 aa13.55□□□□□ -0.24
NDUFA3-208ENST00000422029 BMP8BP34820 402 aa13.55□□□□□ -0.24
NDUFA3-208ENST00000422029 SNAP25P60880 206 aa13.55□□□□□ -0.24
NDUFA3-208ENST00000422029 IRX5P78411 483 aaPredicted RBP13.55□□□□□ -0.24
NDUFA3-208ENST00000422029 KCTD2Q14681 263 aa13.55□□□□□ -0.24
NDUFA3-208ENST00000422029 SBK1Q52WX2 424 aa13.55□□□□□ -0.24
NDUFA3-208ENST00000422029 OLFML2BQ68BL8 750 aa13.55□□□□□ -0.24
NDUFA3-208ENST00000422029 IFNL3Q8IZI9 196 aa13.55□□□□□ -0.24
NDUFA3-208ENST00000422029 ZNF444Q8N0Y2 327 aaPredicted RBP13.55□□□□□ -0.24
NDUFA3-208ENST00000422029 YTHDC1Q96MU7 727 aaKnown RBP13.55□□□□□ -0.24
NDUFA3-208ENST00000422029 RAVER2Q9HCJ3 691 aaKnown RBP13.55□□□□□ -0.24
NDUFA3-208ENST00000422029 RTN4Q9NQC3 1192 aaKnown RBP13.55□□□□□ -0.24
NDUFA3-208ENST00000422029 A0A0G2JMZ2 1700 aa13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 PATL2C9JE40 543 aaKnown RBP13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 KBTBD13C9JR72 458 aa13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 DNM1LO00429 736 aa13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 CTDSPL2Q05D32 466 aa13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 TRIM60Q495X7 471 aa13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 SNRNP48Q6IEG0 339 aaKnown RBP13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 SLC39A5Q6ZMH5 540 aa13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 SH3RF1Q7Z6J0 888 aa13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 RIOX2Q8IUF8 465 aa13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 TDHQ8IZJ6 230 aa13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 DEFB123Q8N688 67 aa13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 ARRDC4Q8NCT1 418 aa13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 REPS2Q8NFH8 660 aa13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 PI4K2BQ8TCG2 481 aa13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 CEP95Q96GE4 821 aa13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 FAM161BQ96MY7 647 aa13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 LBHD1Q9BQE6 289 aaPredicted RBP13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 SLF1Q9BQI6 1058 aa13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 SLC5A4Q9NY91 659 aa13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 ZNF214Q9UL59 606 aaPredicted RBP13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 ADAMTS5Q9UNA0 930 aa13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 ZNFX1Q9P2E3 1918 aaKnown RBP13.54□□□□□ -0.24
NDUFA3-208ENST00000422029 PARP14Q460N5 1801 aa13.53□□□□□ -0.24
NDUFA3-208ENST00000422029 A0A1W2PPC1 479 aa13.53□□□□□ -0.24
NDUFA3-208ENST00000422029 SEPT4O43236 478 aa13.53□□□□□ -0.24
NDUFA3-208ENST00000422029 SLC25A27O95847 323 aa13.53□□□□□ -0.24
NDUFA3-208ENST00000422029 LRRC41Q15345 812 aa13.53□□□□□ -0.24
NDUFA3-208ENST00000422029 ANKRD45Q5TZF3 282 aa13.53□□□□□ -0.24
NDUFA3-208ENST00000422029 RASGRP2Q7LDG7 609 aa13.53□□□□□ -0.24
NDUFA3-208ENST00000422029 DDX11Q96FC9 970 aa13.53□□□□□ -0.24
NDUFA3-208ENST00000422029 HOMER2Q9NSB8 354 aa13.53□□□□□ -0.24
NDUFA3-208ENST00000422029 NYAP2Q9P242 653 aa13.53□□□□□ -0.24
NDUFA3-208ENST00000422029 CTDP1Q9Y5B0 961 aaPredicted RBP13.53□□□□□ -0.24
NDUFA3-208ENST00000422029 DDX49Q9Y6V7 483 aaKnown RBP13.53□□□□□ -0.24
NDUFA3-208ENST00000422029 IGKV6D-41A0A0C4DH26 115 aa13.52□□□□□ -0.25
NDUFA3-208ENST00000422029 NMT2O60551 498 aa13.52□□□□□ -0.25
NDUFA3-208ENST00000422029 MSCO60682 206 aa13.52□□□□□ -0.25
NDUFA3-208ENST00000422029 TFAP4Q01664 338 aa13.52□□□□□ -0.25
NDUFA3-208ENST00000422029 ZNF792Q3KQV3 632 aa13.52□□□□□ -0.25
NDUFA3-208ENST00000422029 TINF2Q9BSI4 451 aa13.52□□□□□ -0.25
NDUFA3-208ENST00000422029 XPNPEP3Q9NQH7 507 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms