RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 BRIP1Q9BX63 1249 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 NYXQ9GZU5 481 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 MRPL44Q9H9J2 332 aaKnown RBP15.11■□□□□ 0.01
MCF2L-213ENST00000421756 RPS6KA4O75676 772 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 IQUBQ8NA54 791 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 SLF1Q9BQI6 1058 aa15.11■□□□□ 0.01
MCF2L-213ENST00000421756 SNAP25P60880 206 aa15.1■□□□□ 0.01
MCF2L-213ENST00000421756 TC2NQ8N9U0 490 aa15.1■□□□□ 0.01
MCF2L-213ENST00000421756 NELFBQ8WX92 580 aa15.1■□□□□ 0.01
MCF2L-213ENST00000421756 ZHX3Q9H4I2 956 aa15.1■□□□□ 0.01
MCF2L-213ENST00000421756 DACH1Q9UI36 760 aa15.1■□□□□ 0.01
MCF2L-213ENST00000421756 KIF5BP33176 963 aa15.1■□□□□ 0.01
MCF2L-213ENST00000421756 DNA2P51530 1060 aa15.1■□□□□ 0.01
MCF2L-213ENST00000421756 WWC2Q6AWC2 1192 aa15.1■□□□□ 0.01
MCF2L-213ENST00000421756 TRMT1LQ7Z2T5 733 aaKnown RBP15.1■□□□□ 0.01
MCF2L-213ENST00000421756 ANKRD7Q92527 254 aa15.1■□□□□ 0.01
MCF2L-213ENST00000421756 EYA3Q99504 573 aa15.1■□□□□ 0.01
MCF2L-213ENST00000421756 TMEM47Q9BQJ4 181 aa15.1■□□□□ 0.01
MCF2L-213ENST00000421756 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.1■□□□□ 0.017e-7■□□□□ 11.2
MCF2L-213ENST00000421756 CYTH3O43739 400 aa15.1■□□□□ 0.01
MCF2L-213ENST00000421756 XDHP47989 1333 aa15.1■□□□□ 0.01
MCF2L-213ENST00000421756 UBXN1Q04323 297 aa15.1■□□□□ 0.01
MCF2L-213ENST00000421756 FILIP1LQ4L180 1135 aa15.1■□□□□ 0.01
MCF2L-213ENST00000421756 ZNF569Q5MCW4 686 aa15.1■□□□□ 0.01
MCF2L-213ENST00000421756 MTRQ99707 1265 aa15.1■□□□□ 0.01
MCF2L-213ENST00000421756 ANKRD2Q9GZV1 360 aa15.1■□□□□ 0.01
MCF2L-213ENST00000421756 RNF225M0QZC1 329 aaPredicted RBP15.09■□□□□ 0.01
MCF2L-213ENST00000421756 BAG3O95817 575 aa15.09■□□□□ 0.01
MCF2L-213ENST00000421756 FXR1P51114 621 aaKnown RBP eCLIP15.09■□□□□ 0.01
MCF2L-213ENST00000421756 NPY5RQ15761 445 aa15.09■□□□□ 0.01
MCF2L-213ENST00000421756 DTHD1Q6ZMT9 781 aa15.09■□□□□ 0.01
MCF2L-213ENST00000421756 ZSCAN29Q8IWY8 852 aaPredicted RBP15.09■□□□□ 0.01
MCF2L-213ENST00000421756 PIGSQ96S52 555 aa15.09■□□□□ 0.01
MCF2L-213ENST00000421756 BPIFA3Q9BQP9 254 aa15.09■□□□□ 0.01
MCF2L-213ENST00000421756 LRRC4BQ9NT99 713 aa15.09■□□□□ 0.01
MCF2L-213ENST00000421756 RBM28Q9NW13 759 aaKnown RBP15.09■□□□□ 0.01
MCF2L-213ENST00000421756 AKR1B15C9JRZ8 316 aaPredicted RBP15.09■□□□□ 0.01
MCF2L-213ENST00000421756 TOM1O60784 492 aa15.09■□□□□ 0.01
MCF2L-213ENST00000421756 TRIM37O94972 964 aa15.09■□□□□ 0.01
MCF2L-213ENST00000421756 TXLNAP40222 546 aa15.09■□□□□ 0.01
MCF2L-213ENST00000421756 TRIM47Q96LD4 638 aa15.09■□□□□ 0.01
MCF2L-213ENST00000421756 TBC1D7Q9P0N9 293 aa15.09■□□□□ 0.01
MCF2L-213ENST00000421756 TRIM10Q9UDY6 481 aa15.09■□□□□ 0.01
MCF2L-213ENST00000421756 ATRNO75882 1429 aa15.09■□□□□ 0.01
MCF2L-213ENST00000421756 TAL1P17542 331 aaPredicted RBP15.09■□□□□ 0.01
MCF2L-213ENST00000421756 SKIDA1Q1XH10 827 aa15.09■□□□□ 0.01
MCF2L-213ENST00000421756 UBR2Q8IWV8 1755 aa15.08■□□□□ 0.01
MCF2L-213ENST00000421756 KIF4BQ2VIQ3 1234 aa15.08■□□□□ 0.01
MCF2L-213ENST00000421756 RAD9BQ6WBX8 426 aa15.08■□□□□ 0.01
MCF2L-213ENST00000421756 DRC1Q96MC2 740 aa15.08■□□□□ 0.01
MCF2L-213ENST00000421756 TRERF1Q96PN7 1200 aa15.08■□□□□ 0.01
MCF2L-213ENST00000421756 ATP8A2Q9NTI2 1148 aa15.08■□□□□ 0.01
MCF2L-213ENST00000421756 PLEKHG2Q9H7P9 1386 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 USP17L5A8MUK1 530 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 ENC1O14682 589 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 PRCPP42785 496 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 PMS1P54277 932 aaKnown RBP15.08■□□□□ 0
MCF2L-213ENST00000421756 CACNB1Q02641 598 aaPredicted RBP15.08■□□□□ 0
MCF2L-213ENST00000421756 SLC35G1Q2M3R5 365 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 FKBP15Q5T1M5 1219 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 TICAM2Q86XR7 235 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 REXO1L1PQ8IX06 675 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 KANSL2Q9H9L4 492 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 CGNQ9P2M7 1197 aaKnown RBP15.08■□□□□ 0
MCF2L-213ENST00000421756 ARPP21Q9UBL0 812 aaPredicted RBP15.08■□□□□ 0
MCF2L-213ENST00000421756 GUCA1BQ9UMX6 200 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 LRP6O75581 1613 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 SPEF2Q9C093 1822 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 SMCO2A6NFE2 343 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 RHOXF2BP0C7M4 288 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 CALM1P0DP23 149 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 CALM2P0DP24 149 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 CALM3P0DP25 149 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 TNNI2P48788 182 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 KCTD19Q17RG1 926 aaPredicted RBP15.08■□□□□ 0
MCF2L-213ENST00000421756 SHROOM1Q2M3G4 852 aaPredicted RBP15.08■□□□□ 0
MCF2L-213ENST00000421756 C12orf60Q5U649 245 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 ENOX1Q8TC92 643 aaKnown RBP15.08■□□□□ 0
MCF2L-213ENST00000421756 CEP95Q96GE4 821 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 ERO1AQ96HE7 468 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 ZFP91Q96JP5 570 aaPredicted RBP15.08■□□□□ 0
MCF2L-213ENST00000421756 RHOXF2Q9BQY4 288 aa15.08■□□□□ 0
MCF2L-213ENST00000421756 SRRTQ9BXP5 876 aaKnown RBP15.08■□□□□ 0
MCF2L-213ENST00000421756 ZSCAN12O43309 604 aa15.07■□□□□ 0
MCF2L-213ENST00000421756 ASIC1P78348 528 aa15.07■□□□□ 0
MCF2L-213ENST00000421756 MRPS25P82663 173 aaKnown RBP15.07■□□□□ 0
MCF2L-213ENST00000421756 PFKFB3Q16875 520 aaPredicted RBP15.07■□□□□ 0
MCF2L-213ENST00000421756 SOGA3Q5TF21 947 aa15.07■□□□□ 0
MCF2L-213ENST00000421756 PKNOX2Q96KN3 472 aa15.07■□□□□ 0
MCF2L-213ENST00000421756 GDAP1L1Q96MZ0 367 aa15.07■□□□□ 0
MCF2L-213ENST00000421756 THRAP3Q9Y2W1 955 aaKnown RBP15.07■□□□□ 0
MCF2L-213ENST00000421756 PCDHAC2Q9Y5I4 1007 aa15.07■□□□□ 0
MCF2L-213ENST00000421756 MYH13Q9UKX3 1938 aa15.07■□□□□ 0
MCF2L-213ENST00000421756 ARHGAP6O43182 974 aa15.07■□□□□ 0
MCF2L-213ENST00000421756 TM4SF1P30408 202 aa15.07■□□□□ 0
MCF2L-213ENST00000421756 KLK7P49862 253 aa15.07■□□□□ 0
MCF2L-213ENST00000421756 KRT31Q15323 416 aa15.07■□□□□ 0
MCF2L-213ENST00000421756 CCDC96Q2M329 555 aa15.07■□□□□ 0
MCF2L-213ENST00000421756 KANK3Q6NY19 840 aa15.07■□□□□ 0
MCF2L-213ENST00000421756 KRT9P35527 623 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms