RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 CCL15-CCL14A0A0B4J2E2 113 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 GOLGA8HP0CJ92 632 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 SNHG28P0DPA3 235 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 PDIA3P30101 505 aaKnown RBP18.34■□□□□ 0.53
DDX55-203ENST00000421670 SLC1A4P43007 532 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 CCL15Q16663 113 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 PROCA1Q8NCQ7 364 aaPredicted RBP18.34■□□□□ 0.53
DDX55-203ENST00000421670 DCAF4Q8WV16 495 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 GMCL1Q96IK5 515 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 ZIC5Q96T25 663 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 GOLGA8AA7E2F4 631 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 WDR46O15213 610 aaKnown RBP18.34■□□□□ 0.53
DDX55-203ENST00000421670 CETPP11597 493 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 BMP3P12645 472 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 METAP2P50579 478 aaKnown RBP eCLIP18.34■□□□□ 0.53
DDX55-203ENST00000421670 CCT2P78371 535 aaKnown RBP18.34■□□□□ 0.53
DDX55-203ENST00000421670 GRM4Q14833 912 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 ME3Q16798 604 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 STAG2Q8N3U4 1231 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 BRI3BPQ8WY22 251 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 TANGO6Q9C0B7 1094 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 RPAP3Q9H6T3 665 aaPredicted RBP18.34■□□□□ 0.53
DDX55-203ENST00000421670 NCOA5Q9HCD5 579 aaKnown RBP18.34■□□□□ 0.53
DDX55-203ENST00000421670 TSHZ2Q9NRE2 1034 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 MAD2L2Q9UI95 211 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 LIMCH1Q9UPQ0 1083 aa18.34■□□□□ 0.53
DDX55-203ENST00000421670 NID2Q14112 1375 aa18.33■□□□□ 0.53
DDX55-203ENST00000421670 AOC2O75106 756 aa18.33■□□□□ 0.52
DDX55-203ENST00000421670 PARP1P09874 1014 aaKnown RBP18.33■□□□□ 0.52
DDX55-203ENST00000421670 CALM1P0DP23 149 aa18.33■□□□□ 0.52
DDX55-203ENST00000421670 CALM2P0DP24 149 aa18.33■□□□□ 0.52
DDX55-203ENST00000421670 CALM3P0DP25 149 aa18.33■□□□□ 0.52
DDX55-203ENST00000421670 ZNF543Q08ER8 600 aa18.33■□□□□ 0.52
DDX55-203ENST00000421670 CTCFLQ8NI51 663 aaPredicted RBP18.33■□□□□ 0.52
DDX55-203ENST00000421670 ZNF274Q96GC6 653 aaPredicted RBP18.33■□□□□ 0.52
DDX55-203ENST00000421670 GPCPD1Q9NPB8 672 aa18.33■□□□□ 0.52
DDX55-203ENST00000421670 A0A0G2JMZ2 1700 aa18.33■□□□□ 0.52
DDX55-203ENST00000421670 RTN1Q16799 776 aa18.32■□□□□ 0.52
DDX55-203ENST00000421670 FASTKD5Q7L8L6 764 aaKnown RBP18.32■□□□□ 0.52
DDX55-203ENST00000421670 NECAB1Q8N987 351 aa18.32■□□□□ 0.52
DDX55-203ENST00000421670 FANCBQ8NB91 859 aa18.32■□□□□ 0.52
DDX55-203ENST00000421670 CPVLQ9H3G5 476 aa18.32■□□□□ 0.52
DDX55-203ENST00000421670 AGTPBP1Q9UPW5 1226 aa18.32■□□□□ 0.52
DDX55-203ENST00000421670 MANSC4A6NHS7 340 aaPredicted RBP18.31■□□□□ 0.52
DDX55-203ENST00000421670 CDC27P30260 824 aa18.31■□□□□ 0.52
DDX55-203ENST00000421670 VEGFBP49765 207 aa18.31■□□□□ 0.52
DDX55-203ENST00000421670 RCAN1P53805 252 aa18.31■□□□□ 0.52
DDX55-203ENST00000421670 ASPRV1Q53RT3 343 aa18.31■□□□□ 0.52
DDX55-203ENST00000421670 TTBK2Q6IQ55 1244 aa18.31■□□□□ 0.52
DDX55-203ENST00000421670 GPAT2Q6NUI2 795 aa18.31■□□□□ 0.52
DDX55-203ENST00000421670 SAMD1Q6SPF0 538 aaPredicted RBP18.31■□□□□ 0.52
DDX55-203ENST00000421670 CMTR1Q8N1G2 835 aaKnown RBP18.31■□□□□ 0.52
DDX55-203ENST00000421670 IL27Q8NEV9 243 aa18.31■□□□□ 0.52
DDX55-203ENST00000421670 PTPN18Q99952 460 aa18.31■□□□□ 0.52
DDX55-203ENST00000421670 FBXO28Q9NVF7 368 aa18.31■□□□□ 0.52
DDX55-203ENST00000421670 WDR33Q9C0J8 1336 aaKnown RBP18.31■□□□□ 0.52
DDX55-203ENST00000421670 PALM3A6NDB9 673 aaPredicted RBP18.3■□□□□ 0.52
DDX55-203ENST00000421670 BTBD19C9JJ37 291 aa18.3■□□□□ 0.52
DDX55-203ENST00000421670 TMEM232C9JQI7 657 aa18.3■□□□□ 0.52
DDX55-203ENST00000421670 PLEKHA8P1O95397 391 aa18.3■□□□□ 0.52
DDX55-203ENST00000421670 KIF5BP33176 963 aa18.3■□□□□ 0.52
DDX55-203ENST00000421670 SLC16A2P36021 539 aa18.3■□□□□ 0.52
DDX55-203ENST00000421670 KIF23Q02241 960 aaPredicted RBP18.3■□□□□ 0.52
DDX55-203ENST00000421670 SCRN1Q12765 414 aa18.3■□□□□ 0.52
DDX55-203ENST00000421670 IKQ13123 557 aaPredicted RBP18.3■□□□□ 0.52
DDX55-203ENST00000421670 NOGQ13253 232 aa18.3■□□□□ 0.52
DDX55-203ENST00000421670 GPATCH4Q5T3I0 446 aaKnown RBP18.3■□□□□ 0.52
DDX55-203ENST00000421670 MAP3K14Q99558 947 aa18.3■□□□□ 0.52
DDX55-203ENST00000421670 SLKQ9H2G2 1235 aaPredicted RBP18.3■□□□□ 0.52
DDX55-203ENST00000421670 FAM217BQ9NTX9 383 aaPredicted RBP18.3■□□□□ 0.52
DDX55-203ENST00000421670 IGF2BP3O00425 579 aaKnown RBP eCLIP18.3■□□□□ 0.52
DDX55-203ENST00000421670 PFKFB2O60825 505 aa18.3■□□□□ 0.52
DDX55-203ENST00000421670 DTNBO60941 627 aa18.3■□□□□ 0.52
DDX55-203ENST00000421670 ADD1P35611 737 aaKnown RBP18.3■□□□□ 0.52
DDX55-203ENST00000421670 MCM2P49736 904 aa18.3■□□□□ 0.52
DDX55-203ENST00000421670 STAT2P52630 851 aa18.3■□□□□ 0.52
DDX55-203ENST00000421670 ST3GAL1Q11201 340 aa18.3■□□□□ 0.52
DDX55-203ENST00000421670 FAM43AQ8N2R8 423 aa18.3■□□□□ 0.52
DDX55-203ENST00000421670 GTF3C6Q969F1 213 aa18.3■□□□□ 0.52
DDX55-203ENST00000421670 TMX3Q96JJ7 454 aa18.3■□□□□ 0.52
DDX55-203ENST00000421670 UBA5Q9GZZ9 404 aa18.3■□□□□ 0.52
DDX55-203ENST00000421670 TESPA1A2RU30 521 aaPredicted RBP18.29■□□□□ 0.52
DDX55-203ENST00000421670 USP17L15C9J2P7 530 aa18.29■□□□□ 0.52
DDX55-203ENST00000421670 USP17L13C9JLJ4 530 aa18.29■□□□□ 0.52
DDX55-203ENST00000421670 USP17L11C9JVI0 530 aa18.29■□□□□ 0.52
DDX55-203ENST00000421670 KLRF2D3W0D1 207 aa18.29■□□□□ 0.52
DDX55-203ENST00000421670 USP17L18D6R9N7 530 aa18.29■□□□□ 0.52
DDX55-203ENST00000421670 USP17L22D6RA61 530 aa18.29■□□□□ 0.52
DDX55-203ENST00000421670 USP17L17D6RBQ6 530 aa18.29■□□□□ 0.52
DDX55-203ENST00000421670 USP17L19D6RCP7 530 aa18.29■□□□□ 0.52
DDX55-203ENST00000421670 USP17L20D6RJB6 530 aa18.29■□□□□ 0.52
DDX55-203ENST00000421670 FLOT1O75955 427 aa18.29■□□□□ 0.52
DDX55-203ENST00000421670 USP17L24Q0WX57 530 aa18.29■□□□□ 0.52
DDX55-203ENST00000421670 CATSPERGQ6ZRH7 1159 aa18.29■□□□□ 0.52
DDX55-203ENST00000421670 TMTC3Q6ZXV5 915 aa18.29■□□□□ 0.52
DDX55-203ENST00000421670 NBPF11Q86T75 865 aa18.29■□□□□ 0.52
DDX55-203ENST00000421670 CCDC82Q8N4S0 544 aa18.29■□□□□ 0.52
DDX55-203ENST00000421670 SNX21Q969T3 373 aa18.29■□□□□ 0.52
DDX55-203ENST00000421670 RBM28Q9NW13 759 aaKnown RBP18.29■□□□□ 0.52
DDX55-203ENST00000421670 SMCHD1A6NHR9 2005 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms