RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 SEC23AQ15436 765 aa16.99■□□□□ 0.31
PTPN18-204ENST00000420717 FAM83BQ5T0W9 1011 aa16.99■□□□□ 0.31
PTPN18-204ENST00000420717 OTOP1Q7RTM1 612 aa16.99■□□□□ 0.31
PTPN18-204ENST00000420717 ANKRD13CQ8N6S4 541 aa16.99■□□□□ 0.31
PTPN18-204ENST00000420717 ENAHQ8N8S7 591 aaPredicted RBP16.99■□□□□ 0.31
PTPN18-204ENST00000420717 NCOA7Q8NI08 942 aa16.99■□□□□ 0.31
PTPN18-204ENST00000420717 ZSCAN10Q96SZ4 725 aaPredicted RBP16.99■□□□□ 0.31
PTPN18-204ENST00000420717 PPP1R9AQ9ULJ8 1098 aa16.99■□□□□ 0.31
PTPN18-204ENST00000420717 TNKSO95271 1327 aa16.98■□□□□ 0.31
PTPN18-204ENST00000420717 PRMT2P55345 433 aa16.98■□□□□ 0.31
PTPN18-204ENST00000420717 ERVK-9P63128 1117 aa16.98■□□□□ 0.31
PTPN18-204ENST00000420717 ERVK-24P63145 666 aa16.98■□□□□ 0.31
PTPN18-204ENST00000420717 KIF22Q14807 665 aa16.98■□□□□ 0.31
PTPN18-204ENST00000420717 RNF20Q5VTR2 975 aa16.98■□□□□ 0.31
PTPN18-204ENST00000420717 SLFN13Q68D06 897 aa16.98■□□□□ 0.31
PTPN18-204ENST00000420717 DCAF4Q8WV16 495 aa16.98■□□□□ 0.31
PTPN18-204ENST00000420717 TRIM47Q96LD4 638 aa16.98■□□□□ 0.31
PTPN18-204ENST00000420717 FLOT1O75955 427 aa16.97■□□□□ 0.31
PTPN18-204ENST00000420717 BMP3P12645 472 aa16.97■□□□□ 0.31
PTPN18-204ENST00000420717 CYB5R4Q7L1T6 521 aa16.97■□□□□ 0.31
PTPN18-204ENST00000420717 RALYLQ86SE5 291 aaKnown RBP16.97■□□□□ 0.31
PTPN18-204ENST00000420717 REPS2Q8NFH8 660 aa16.97■□□□□ 0.31
PTPN18-204ENST00000420717 GPRC5AQ8NFJ5 357 aa16.97■□□□□ 0.31
PTPN18-204ENST00000420717 SLF1Q9BQI6 1058 aa16.97■□□□□ 0.31
PTPN18-204ENST00000420717 ARHGAP39Q9C0H5 1083 aa16.97■□□□□ 0.31
PTPN18-204ENST00000420717 EFCC1Q9HA90 598 aa16.97■□□□□ 0.31
PTPN18-204ENST00000420717 FEM1BQ9UK73 627 aa16.97■□□□□ 0.31
PTPN18-204ENST00000420717 WDR19Q8NEZ3 1342 aa16.96■□□□□ 0.31
PTPN18-204ENST00000420717 ATP2A1O14983 1001 aa16.96■□□□□ 0.31
PTPN18-204ENST00000420717 FDX1P10109 184 aa16.96■□□□□ 0.31
PTPN18-204ENST00000420717 HSPA4P34932 840 aa16.96■□□□□ 0.31
PTPN18-204ENST00000420717 FCGRTP55899 365 aa16.96■□□□□ 0.31
PTPN18-204ENST00000420717 ANTXR2P58335 489 aa16.96■□□□□ 0.31
PTPN18-204ENST00000420717 FBXO46Q6PJ61 603 aaPredicted RBP16.96■□□□□ 0.31
PTPN18-204ENST00000420717 BTNL9Q6UXG8 535 aa16.96■□□□□ 0.31
PTPN18-204ENST00000420717 ATG4CQ96DT6 458 aa16.96■□□□□ 0.31
PTPN18-204ENST00000420717 NUP88Q99567 741 aaPredicted RBP16.96■□□□□ 0.31
PTPN18-204ENST00000420717 UBAC1Q9BSL1 405 aa16.96■□□□□ 0.31
PTPN18-204ENST00000420717 FBXO28Q9NVF7 368 aa16.96■□□□□ 0.31
PTPN18-204ENST00000420717 BTBD7Q9P203 1132 aa16.96■□□□□ 0.31
PTPN18-204ENST00000420717 VWA5AO00534 786 aa16.95■□□□□ 0.3
PTPN18-204ENST00000420717 PDHBP11177 359 aa16.95■□□□□ 0.3
PTPN18-204ENST00000420717 MAPK4P31152 587 aa16.95■□□□□ 0.3
PTPN18-204ENST00000420717 SLC1A4P43007 532 aa16.95■□□□□ 0.3
PTPN18-204ENST00000420717 PSMC4P43686 418 aa16.95■□□□□ 0.3
PTPN18-204ENST00000420717 FAM160B2Q86V87 743 aa16.95■□□□□ 0.3
PTPN18-204ENST00000420717 PRPF38AQ8NAV1 312 aaKnown RBP16.95■□□□□ 0.3
PTPN18-204ENST00000420717 SHCBP1Q8NEM2 672 aa16.95■□□□□ 0.3
PTPN18-204ENST00000420717 MCOLN1Q9GZU1 580 aa16.95■□□□□ 0.3
PTPN18-204ENST00000420717 SRRDQ9UH36 339 aa16.95■□□□□ 0.3
PTPN18-204ENST00000420717 TRIM17Q9Y577 477 aa16.95■□□□□ 0.3
PTPN18-204ENST00000420717 DOCK3Q8IZD9 2030 aa16.94■□□□□ 0.3
PTPN18-204ENST00000420717 EIF5BO60841 1220 aaKnown RBP16.94■□□□□ 0.3
PTPN18-204ENST00000420717 STAT2P52630 851 aa16.94■□□□□ 0.3
PTPN18-204ENST00000420717 CCNA1P78396 465 aa16.94■□□□□ 0.3
PTPN18-204ENST00000420717 KRT32Q14532 448 aa16.94■□□□□ 0.3
PTPN18-204ENST00000420717 RASEFQ8IZ41 740 aa16.94■□□□□ 0.3
PTPN18-204ENST00000420717 PNMA1Q8ND90 353 aa16.94■□□□□ 0.3
PTPN18-204ENST00000420717 ZKSCAN3Q9BRR0 538 aa16.94■□□□□ 0.3
PTPN18-204ENST00000420717 SPATC1LQ9H0A9 340 aa16.94■□□□□ 0.3
PTPN18-204ENST00000420717 SLC38A10Q9HBR0 1119 aa16.94■□□□□ 0.3
PTPN18-204ENST00000420717 ZNF214Q9UL59 606 aaPredicted RBP16.94■□□□□ 0.3
PTPN18-204ENST00000420717 PTPN22Q9Y2R2 807 aa16.94■□□□□ 0.3
PTPN18-204ENST00000420717 RBBP6Q7Z6E9 1792 aaKnown RBP16.93■□□□□ 0.3
PTPN18-204ENST00000420717 ZKSCAN1P17029 563 aaPredicted RBP16.93■□□□□ 0.3
PTPN18-204ENST00000420717 MCCP23508 829 aa16.93■□□□□ 0.3
PTPN18-204ENST00000420717 MCM5P33992 734 aa16.93■□□□□ 0.3
PTPN18-204ENST00000420717 OAZ1P54368 228 aa16.93■□□□□ 0.3
PTPN18-204ENST00000420717 ZNF543Q08ER8 600 aa16.93■□□□□ 0.3
PTPN18-204ENST00000420717 SART3Q15020 963 aaKnown RBP16.93■□□□□ 0.3
PTPN18-204ENST00000420717 Q3C1V9 767 aa16.93■□□□□ 0.3
PTPN18-204ENST00000420717 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.93■□□□□ 0.3
PTPN18-204ENST00000420717 IGDCC4Q8TDY8 1250 aa16.93■□□□□ 0.3
PTPN18-204ENST00000420717 TMEM87BQ96K49 555 aa16.93■□□□□ 0.3
PTPN18-204ENST00000420717 PAGR1Q9BTK6 254 aa16.93■□□□□ 0.3
PTPN18-204ENST00000420717 TNPO2O14787 897 aaKnown RBP16.92■□□□□ 0.3
PTPN18-204ENST00000420717 HOXD10P28358 340 aa16.92■□□□□ 0.3
PTPN18-204ENST00000420717 COPB2P35606 906 aa16.92■□□□□ 0.3
PTPN18-204ENST00000420717 IRF5Q13568 498 aa16.92■□□□□ 0.3
PTPN18-204ENST00000420717 TMEM132BQ14DG7 1078 aa16.92■□□□□ 0.3
PTPN18-204ENST00000420717 GPATCH4Q5T3I0 446 aaKnown RBP16.92■□□□□ 0.3
PTPN18-204ENST00000420717 IFIT1BQ5T764 474 aaKnown RBP16.92■□□□□ 0.3
PTPN18-204ENST00000420717 RASGRP2Q7LDG7 609 aa16.92■□□□□ 0.3
PTPN18-204ENST00000420717 RIOX2Q8IUF8 465 aa16.92■□□□□ 0.3
PTPN18-204ENST00000420717 CHURC1Q8WUH1 139 aa16.92■□□□□ 0.3
PTPN18-204ENST00000420717 PORCNQ9H237 461 aa16.92■□□□□ 0.3
PTPN18-204ENST00000420717 KAT14Q9H8E8 782 aa16.92■□□□□ 0.3
PTPN18-204ENST00000420717 TMEM232C9JQI7 657 aa16.91■□□□□ 0.3
PTPN18-204ENST00000420717 RAD21O60216 631 aa16.91■□□□□ 0.3
PTPN18-204ENST00000420717 PEX10O60683 326 aa16.91■□□□□ 0.3
PTPN18-204ENST00000420717 FMNL1O95466 1100 aaPredicted RBP16.91■□□□□ 0.3
PTPN18-204ENST00000420717 LIFRP42702 1097 aa16.91■□□□□ 0.3
PTPN18-204ENST00000420717 COL9A3Q14050 684 aaPredicted RBP16.91■□□□□ 0.3
PTPN18-204ENST00000420717 ASPRV1Q53RT3 343 aa16.91■□□□□ 0.3
PTPN18-204ENST00000420717 TNS4Q8IZW8 715 aa16.91■□□□□ 0.3
PTPN18-204ENST00000420717 SOCS4Q8WXH5 440 aa16.91■□□□□ 0.3
PTPN18-204ENST00000420717 USP6NLQ92738 828 aa16.91■□□□□ 0.3
PTPN18-204ENST00000420717 COA7Q96BR5 231 aa16.91■□□□□ 0.3
PTPN18-204ENST00000420717 IL17RAQ96F46 866 aa16.91■□□□□ 0.3
PTPN18-204ENST00000420717 MAP3K14Q99558 947 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms