RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 GOLIM4O00461 696 aa17.23■□□□□ 0.35
NFE4-201ENST00000420058 MYCNP04198 464 aaPredicted RBP17.23■□□□□ 0.35
NFE4-201ENST00000420058 CHGBP05060 677 aa17.23■□□□□ 0.35
NFE4-201ENST00000420058 ZNF792Q3KQV3 632 aa17.23■□□□□ 0.35
NFE4-201ENST00000420058 ERC1Q8IUD2 1116 aa17.23■□□□□ 0.35
NFE4-201ENST00000420058 REPS2Q8NFH8 660 aa17.23■□□□□ 0.35
NFE4-201ENST00000420058 MAFAQ8NHW3 353 aaPredicted RBP17.23■□□□□ 0.35
NFE4-201ENST00000420058 ARMT1Q9H993 441 aa17.23■□□□□ 0.35
NFE4-201ENST00000420058 FBXO28Q9NVF7 368 aa17.23■□□□□ 0.35
NFE4-201ENST00000420058 SLC5A4Q9NY91 659 aa17.23■□□□□ 0.35
NFE4-201ENST00000420058 SWAP70Q9UH65 585 aa17.23■□□□□ 0.35
NFE4-201ENST00000420058 PGK1P00558 417 aa17.22■□□□□ 0.35
NFE4-201ENST00000420058 PGK2P07205 417 aa17.22■□□□□ 0.35
NFE4-201ENST00000420058 ZNF865P0CJ78 1059 aaPredicted RBP17.22■□□□□ 0.35
NFE4-201ENST00000420058 FCER1AP12319 257 aa17.22■□□□□ 0.35
NFE4-201ENST00000420058 C12orf60Q5U649 245 aa17.22■□□□□ 0.35
NFE4-201ENST00000420058 FTSJ3Q8IY81 847 aaKnown RBP17.22■□□□□ 0.35
NFE4-201ENST00000420058 TINF2Q9BSI4 451 aa17.22■□□□□ 0.35
NFE4-201ENST00000420058 NRBP1Q9UHY1 535 aa17.22■□□□□ 0.35
NFE4-201ENST00000420058 KIAA0355O15063 1070 aa17.21■□□□□ 0.35
NFE4-201ENST00000420058 WDR46O15213 610 aaKnown RBP17.21■□□□□ 0.35
NFE4-201ENST00000420058 SLC25A27O95847 323 aa17.21■□□□□ 0.35
NFE4-201ENST00000420058 CDK8P49336 464 aa17.21■□□□□ 0.35
NFE4-201ENST00000420058 ICA1Q05084 483 aa17.21■□□□□ 0.35
NFE4-201ENST00000420058 RIOX2Q8IUF8 465 aa17.21■□□□□ 0.35
NFE4-201ENST00000420058 SIRT2Q8IXJ6 389 aa17.21■□□□□ 0.35
NFE4-201ENST00000420058 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.21■□□□□ 0.35
NFE4-201ENST00000420058 XPNPEP3Q9NQH7 507 aa17.21■□□□□ 0.35
NFE4-201ENST00000420058 TACC3Q9Y6A5 838 aa17.21■□□□□ 0.35
NFE4-201ENST00000420058 NAV1Q8NEY1 1877 aa17.2■□□□□ 0.34
NFE4-201ENST00000420058 CHD7Q9P2D1 2997 aa17.2■□□□□ 0.34
NFE4-201ENST00000420058 VWA5AO00534 786 aa17.2■□□□□ 0.34
NFE4-201ENST00000420058 ADAMTS4O75173 837 aa17.2■□□□□ 0.34
NFE4-201ENST00000420058 EEF2P13639 858 aaKnown RBP17.2■□□□□ 0.34
NFE4-201ENST00000420058 ADD2P35612 726 aa17.2■□□□□ 0.34
NFE4-201ENST00000420058 PANK1Q8TE04 598 aa17.2■□□□□ 0.34
NFE4-201ENST00000420058 LENG1Q96BZ8 264 aaPredicted RBP17.2■□□□□ 0.34
NFE4-201ENST00000420058 CCDC17Q96LX7 622 aa17.2■□□□□ 0.34
NFE4-201ENST00000420058 DNAJC2Q99543 621 aaKnown RBP17.2■□□□□ 0.34
NFE4-201ENST00000420058 ARHGEF10LQ9HCE6 1279 aa17.2■□□□□ 0.34
NFE4-201ENST00000420058 ATP8A2Q9NTI2 1148 aa17.2■□□□□ 0.34
NFE4-201ENST00000420058 ZNF214Q9UL59 606 aaPredicted RBP17.2■□□□□ 0.34
NFE4-201ENST00000420058 DIS3Q9Y2L1 958 aaKnown RBP17.2■□□□□ 0.34
NFE4-201ENST00000420058 PARP14Q460N5 1801 aa17.19■□□□□ 0.34
NFE4-201ENST00000420058 NCOR1O75376 2440 aa17.19■□□□□ 0.34
NFE4-201ENST00000420058 A0A1W2PQ45 241 aaPredicted RBP17.19■□□□□ 0.34
NFE4-201ENST00000420058 A0A1W2PQY0 241 aa17.19■□□□□ 0.34
NFE4-201ENST00000420058 USP17L12C9JPN9 530 aa17.19■□□□□ 0.34
NFE4-201ENST00000420058 USP17L21D6R901 530 aa17.19■□□□□ 0.34
NFE4-201ENST00000420058 MBD4O95243 580 aa17.19■□□□□ 0.34
NFE4-201ENST00000420058 CLTBP09497 229 aa17.19■□□□□ 0.34
NFE4-201ENST00000420058 RARBP10826 455 aa17.19■□□□□ 0.34
NFE4-201ENST00000420058 STAT3P40763 770 aa17.19■□□□□ 0.34
NFE4-201ENST00000420058 FAAP100Q0VG06 881 aa17.19■□□□□ 0.34
NFE4-201ENST00000420058 CCSAPQ6IQ19 270 aaPredicted RBP17.19■□□□□ 0.34
NFE4-201ENST00000420058 SAMD1Q6SPF0 538 aaPredicted RBP17.19■□□□□ 0.34
NFE4-201ENST00000420058 C16orf86Q6ZW13 317 aa17.19■□□□□ 0.34
NFE4-201ENST00000420058 MMP19Q99542 508 aa17.19■□□□□ 0.34
NFE4-201ENST00000420058 BDP1A6H8Y1 2624 aa17.19■□□□□ 0.34
NFE4-201ENST00000420058 GRIN2CQ14957 1233 aa17.18■□□□□ 0.34
NFE4-201ENST00000420058 HSP90AB4PQ58FF6 505 aa17.18■□□□□ 0.34
NFE4-201ENST00000420058 ANKRD33Q7Z3H0 272 aa17.18■□□□□ 0.34
NFE4-201ENST00000420058 KLHDC9Q8NEP7 349 aa17.18■□□□□ 0.34
NFE4-201ENST00000420058 PPP1R9AQ9ULJ8 1098 aa17.18■□□□□ 0.34
NFE4-201ENST00000420058 MYO9BQ13459 2157 aa17.18■□□□□ 0.34
NFE4-201ENST00000420058 ROBO3Q96MS0 1386 aa17.17■□□□□ 0.34
NFE4-201ENST00000420058 SNAI1O95863 264 aaPredicted RBP17.17■□□□□ 0.34
NFE4-201ENST00000420058 HOXD11P31277 338 aaPredicted RBP17.17■□□□□ 0.34
NFE4-201ENST00000420058 IRX5P78411 483 aaPredicted RBP17.17■□□□□ 0.34
NFE4-201ENST00000420058 C16orf59Q7L2K0 433 aa17.17■□□□□ 0.34
NFE4-201ENST00000420058 RNF180Q86T96 592 aa17.17■□□□□ 0.34
NFE4-201ENST00000420058 CLASRPQ8N2M8 674 aaKnown RBP17.17■□□□□ 0.34
NFE4-201ENST00000420058 USP38Q8NB14 1042 aa17.17■□□□□ 0.34
NFE4-201ENST00000420058 KIF1BPQ96EK5 621 aa17.17■□□□□ 0.34
NFE4-201ENST00000420058 RNPC3Q96LT9 517 aaKnown RBP17.17■□□□□ 0.34
NFE4-201ENST00000420058 TOX2Q96NM4 488 aa17.17■□□□□ 0.34
NFE4-201ENST00000420058 BOLA2Q9H3K6 86 aa17.17■□□□□ 0.34
NFE4-201ENST00000420058 SH2D4AQ9H788 454 aa17.17■□□□□ 0.34
NFE4-201ENST00000420058 KANSL2Q9H9L4 492 aa17.17■□□□□ 0.34
NFE4-201ENST00000420058 RIPK3Q9Y572 518 aa17.17■□□□□ 0.34
NFE4-201ENST00000420058 ZBED9Q6R2W3 1325 aa17.17■□□□□ 0.34
NFE4-201ENST00000420058 BAZ2AQ9UIF9 1905 aaKnown RBP17.16■□□□□ 0.34
NFE4-201ENST00000420058 TMEM265A0A087WTH1 108 aa17.16■□□□□ 0.34
NFE4-201ENST00000420058 APBB1O00213 710 aa17.16■□□□□ 0.34
NFE4-201ENST00000420058 PQBP1O60828 265 aaKnown RBP17.16■□□□□ 0.34
NFE4-201ENST00000420058 FOSL2P15408 326 aa17.16■□□□□ 0.34
NFE4-201ENST00000420058 KCTD2Q14681 263 aa17.16■□□□□ 0.34
NFE4-201ENST00000420058 FAM83BQ5T0W9 1011 aa17.16■□□□□ 0.34
NFE4-201ENST00000420058 CTR9Q6PD62 1173 aa17.16■□□□□ 0.34
NFE4-201ENST00000420058 TSEN34Q9BSV6 310 aaKnown RBP17.16■□□□□ 0.34
NFE4-201ENST00000420058 PAG1Q9NWQ8 432 aa17.16■□□□□ 0.34
NFE4-201ENST00000420058 COL11A1P12107 1806 aaPredicted RBP17.16■□□□□ 0.34
NFE4-201ENST00000420058 DNAJC25-GNG10A0A024R161 153 aa17.15■□□□□ 0.34
NFE4-201ENST00000420058 AKR1A1P14550 325 aa17.15■□□□□ 0.34
NFE4-201ENST00000420058 RAG1P15918 1043 aa17.15■□□□□ 0.34
NFE4-201ENST00000420058 ATP5JP18859 108 aa17.15■□□□□ 0.34
NFE4-201ENST00000420058 ACLYP53396 1101 aa17.15■□□□□ 0.34
NFE4-201ENST00000420058 HAUS7Q99871 368 aa17.15■□□□□ 0.34
NFE4-201ENST00000420058 PRDM6Q9NQX0 595 aa17.15■□□□□ 0.34
NFE4-201ENST00000420058 TMEM39AQ9NV64 488 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms