RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 SHISA4Q96DD7 197 aa5.91□□□□□ -1.46
SEMA3A-202ENST00000420047 GPR160Q9UJ42 338 aa5.91□□□□□ -1.46
SEMA3A-202ENST00000420047 RBM47A0AV96 593 aaKnown RBP5.9□□□□□ -1.46
SEMA3A-202ENST00000420047 OR14I1A6ND48 311 aa5.9□□□□□ -1.46
SEMA3A-202ENST00000420047 TRIM13O60858 407 aa5.9□□□□□ -1.46
SEMA3A-202ENST00000420047 SASH1O94885 1247 aa5.9□□□□□ -1.46
SEMA3A-202ENST00000420047 BRD1O95696 1058 aa5.9□□□□□ -1.46
SEMA3A-202ENST00000420047 EIF4BP23588 611 aaKnown RBP5.9□□□□□ -1.46
SEMA3A-202ENST00000420047 YARSP54577 528 aaKnown RBP5.9□□□□□ -1.46
SEMA3A-202ENST00000420047 SIGLEC10Q96LC7 697 aa5.9□□□□□ -1.46
SEMA3A-202ENST00000420047 SGPP1Q9BX95 441 aa5.9□□□□□ -1.46
SEMA3A-202ENST00000420047 ZNF281Q9Y2X9 895 aa5.9□□□□□ -1.46
SEMA3A-202ENST00000420047 PSPNO60542 156 aa5.89□□□□□ -1.47
SEMA3A-202ENST00000420047 RLBP1P12271 317 aa5.89□□□□□ -1.47
SEMA3A-202ENST00000420047 LIG3P49916 1009 aa5.89□□□□□ -1.47
SEMA3A-202ENST00000420047 TEKQ02763 1124 aa5.89□□□□□ -1.47
SEMA3A-202ENST00000420047 SSPNQ14714 243 aa5.89□□□□□ -1.47
SEMA3A-202ENST00000420047 TMEM201Q5SNT2 666 aa5.89□□□□□ -1.47
SEMA3A-202ENST00000420047 ERICH6BQ5W0A0 696 aa5.89□□□□□ -1.47
SEMA3A-202ENST00000420047 XYLT2Q9H1B5 865 aa5.89□□□□□ -1.47
SEMA3A-202ENST00000420047 EBF1Q9UH73 591 aa5.89□□□□□ -1.47
SEMA3A-202ENST00000420047 IRAK3Q9Y616 596 aa5.89□□□□□ -1.47
SEMA3A-202ENST00000420047 CARMIL1Q5VZK9 1371 aa5.89□□□□□ -1.47
SEMA3A-202ENST00000420047 ERICH3Q5RHP9 1530 aa5.89□□□□□ -1.47
SEMA3A-202ENST00000420047 GNA15P30679 374 aa5.88□□□□□ -1.47
SEMA3A-202ENST00000420047 RANGAP1P46060 587 aaPredicted RBP5.88□□□□□ -1.47
SEMA3A-202ENST00000420047 FAM9AQ8IZU1 332 aaPredicted RBP5.88□□□□□ -1.47
SEMA3A-202ENST00000420047 FAM13CQ8NE31 585 aa5.88□□□□□ -1.47
SEMA3A-202ENST00000420047 DACT3Q96B18 629 aaPredicted RBP5.88□□□□□ -1.47
SEMA3A-202ENST00000420047 ASPNQ9BXN1 380 aa5.88□□□□□ -1.47
SEMA3A-202ENST00000420047 KRTAP17-1Q9BYP8 105 aa5.88□□□□□ -1.47
SEMA3A-202ENST00000420047 LRRN2O75325 713 aa5.87□□□□□ -1.47
SEMA3A-202ENST00000420047 LDHBP07195 334 aaKnown RBP5.87□□□□□ -1.47
SEMA3A-202ENST00000420047 TFE3P19532 575 aaPredicted RBP5.87□□□□□ -1.47
SEMA3A-202ENST00000420047 SRSF3P84103 164 aaKnown RBP5.87□□□□□ -1.47
SEMA3A-202ENST00000420047 NLRX1Q86UT6 975 aa5.87□□□□□ -1.47
SEMA3A-202ENST00000420047 CCDC84Q86UT8 332 aaPredicted RBP5.87□□□□□ -1.47
SEMA3A-202ENST00000420047 SLFN12Q8IYM2 578 aa5.87□□□□□ -1.47
SEMA3A-202ENST00000420047 ENOX1Q8TC92 643 aaKnown RBP5.87□□□□□ -1.47
SEMA3A-202ENST00000420047 G6PC3Q9BUM1 346 aa5.87□□□□□ -1.47
SEMA3A-202ENST00000420047 CRTAC1Q9NQ79 661 aa5.87□□□□□ -1.47
SEMA3A-202ENST00000420047 SIRT5Q9NXA8 310 aa5.87□□□□□ -1.47
SEMA3A-202ENST00000420047 MBD1Q9UIS9 605 aaPredicted RBP5.87□□□□□ -1.47
SEMA3A-202ENST00000420047 AK5Q9Y6K8 562 aa5.87□□□□□ -1.47
SEMA3A-202ENST00000420047 KIF27Q86VH2 1401 aa5.87□□□□□ -1.47
SEMA3A-202ENST00000420047 ADAMTS20P59510 1910 aa5.86□□□□□ -1.47
SEMA3A-202ENST00000420047 SHROOM2Q13796 1616 aa5.86□□□□□ -1.47
SEMA3A-202ENST00000420047 NOTOA8MTQ0 251 aa5.86□□□□□ -1.47
SEMA3A-202ENST00000420047 UPK3BL1B0FP48 263 aa5.86□□□□□ -1.47
SEMA3A-202ENST00000420047 UPK3BL2E5RIL1 263 aa5.86□□□□□ -1.47
SEMA3A-202ENST00000420047 PLCG1P19174 1290 aa5.86□□□□□ -1.47
SEMA3A-202ENST00000420047 PI3P19957 117 aa5.86□□□□□ -1.47
SEMA3A-202ENST00000420047 RNF111Q6ZNA4 994 aa5.86□□□□□ -1.47
SEMA3A-202ENST00000420047 BORCS6Q96GS4 357 aa5.86□□□□□ -1.47
SEMA3A-202ENST00000420047 KREMEN1Q96MU8 473 aa5.86□□□□□ -1.47
SEMA3A-202ENST00000420047 N4BP3O15049 544 aa5.85□□□□□ -1.47
SEMA3A-202ENST00000420047 P4HBP07237 508 aaKnown RBP5.85□□□□□ -1.47
SEMA3A-202ENST00000420047 KIR2DL1P43626 348 aaPredicted RBP5.85□□□□□ -1.47
SEMA3A-202ENST00000420047 KIR2DL2P43627 348 aaPredicted RBP5.85□□□□□ -1.47
SEMA3A-202ENST00000420047 AFF3P51826 1226 aaKnown RBP5.85□□□□□ -1.47
SEMA3A-202ENST00000420047 CLEC16AQ2KHT3 1053 aa5.85□□□□□ -1.47
SEMA3A-202ENST00000420047 SKOR2Q2VWA4 1001 aaPredicted RBP5.85□□□□□ -1.47
SEMA3A-202ENST00000420047 ADGRF1Q5T601 910 aa5.85□□□□□ -1.47
SEMA3A-202ENST00000420047 OLFML2BQ68BL8 750 aa5.85□□□□□ -1.47
SEMA3A-202ENST00000420047 PRRT2Q7Z6L0 340 aaPredicted RBP5.85□□□□□ -1.47
SEMA3A-202ENST00000420047 JARID2Q92833 1246 aaPredicted RBP5.85□□□□□ -1.47
SEMA3A-202ENST00000420047 CORINQ9Y5Q5 1042 aa5.85□□□□□ -1.47
SEMA3A-202ENST00000420047 PRR36Q9H6K5 1346 aa5.84□□□□□ -1.47
SEMA3A-202ENST00000420047 OTOL1A6NHN0 477 aaPredicted RBP5.84□□□□□ -1.47
SEMA3A-202ENST00000420047 ABLIM1O14639 778 aa5.84□□□□□ -1.47
SEMA3A-202ENST00000420047 NRDCO43847 1150 aa5.84□□□□□ -1.47
SEMA3A-202ENST00000420047 CELA3BP08861 270 aa5.84□□□□□ -1.47
SEMA3A-202ENST00000420047 TNNI2P48788 182 aa5.84□□□□□ -1.47
SEMA3A-202ENST00000420047 MAP3K11Q16584 847 aa5.84□□□□□ -1.47
SEMA3A-202ENST00000420047 PANK1Q8TE04 598 aa5.84□□□□□ -1.47
SEMA3A-202ENST00000420047 CCDC74BQ96LY2 380 aa5.84□□□□□ -1.47
SEMA3A-202ENST00000420047 ASCC2Q9H1I8 757 aaPredicted RBP5.84□□□□□ -1.47
SEMA3A-202ENST00000420047 KIAA0586Q9BVV6 1533 aa5.84□□□□□ -1.48
SEMA3A-202ENST00000420047 PTPRGP23470 1445 aa5.83□□□□□ -1.48
SEMA3A-202ENST00000420047 SHISA3A0PJX4 238 aa5.83□□□□□ -1.48
SEMA3A-202ENST00000420047 SLC22A31A6NKX4 558 aa5.83□□□□□ -1.48
SEMA3A-202ENST00000420047 PRPF40AO75400 957 aaKnown RBP5.83□□□□□ -1.48
SEMA3A-202ENST00000420047 YBX1P67809 324 aaKnown RBP5.83□□□□□ -1.48
SEMA3A-202ENST00000420047 SLC14A2Q15849 920 aa5.83□□□□□ -1.48
SEMA3A-202ENST00000420047 SIRT2Q8IXJ6 389 aa5.83□□□□□ -1.48
SEMA3A-202ENST00000420047 SP8Q8IXZ3 490 aa5.83□□□□□ -1.48
SEMA3A-202ENST00000420047 SYTL5Q8TDW5 730 aaPredicted RBP5.83□□□□□ -1.48
SEMA3A-202ENST00000420047 NOC4LQ9BVI4 516 aaKnown RBP5.83□□□□□ -1.48
SEMA3A-202ENST00000420047 KIF13AQ9H1H9 1805 aa5.83□□□□□ -1.48
SEMA3A-202ENST00000420047 TSPOAP1O95153 1857 aa5.82□□□□□ -1.48
SEMA3A-202ENST00000420047 IRS4O14654 1257 aaPredicted RBP5.82□□□□□ -1.48
SEMA3A-202ENST00000420047 CILPO75339 1184 aa5.82□□□□□ -1.48
SEMA3A-202ENST00000420047 BPNT1O95861 308 aa5.82□□□□□ -1.48
SEMA3A-202ENST00000420047 PNLIPP16233 465 aa5.82□□□□□ -1.48
SEMA3A-202ENST00000420047 RPL10P27635 214 aaKnown RBP5.82□□□□□ -1.48
SEMA3A-202ENST00000420047 VIPR1P32241 457 aa5.82□□□□□ -1.48
SEMA3A-202ENST00000420047 GALK1P51570 392 aa5.82□□□□□ -1.48
SEMA3A-202ENST00000420047 KRTAP10-2P60368 255 aa5.82□□□□□ -1.48
SEMA3A-202ENST00000420047 USHBP1Q8N6Y0 703 aa5.82□□□□□ -1.48
SEMA3A-202ENST00000420047 VWCEQ96DN2 955 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms