RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 KRT2P35908 639 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 PSEN1P49768 467 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 CACNB3P54284 484 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 NOM1Q5C9Z4 860 aaKnown RBP9.35□□□□□ -0.91
COL12A1-204ENST00000419671 SHC4Q6S5L8 630 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 SUPT20HQ8NEM7 779 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 PIBF1Q8WXW3 757 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 CABP5Q9NP86 173 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 SERPINA10Q9UK55 444 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 MTMR7Q9Y216 660 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 PCDHB6Q9Y5E3 794 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 IGKV6D-41A0A0C4DH26 115 aa9.34□□□□□ -0.91
COL12A1-204ENST00000419671 WNT7AO00755 349 aa9.34□□□□□ -0.91
COL12A1-204ENST00000419671 CTAGE5O15320 804 aa9.34□□□□□ -0.91
COL12A1-204ENST00000419671 GOLGA8HP0CJ92 632 aa9.34□□□□□ -0.91
COL12A1-204ENST00000419671 AKR1B1P15121 316 aa9.34□□□□□ -0.91
COL12A1-204ENST00000419671 PFKFB1P16118 471 aa9.34□□□□□ -0.91
COL12A1-204ENST00000419671 SHMT1P34896 483 aa9.34□□□□□ -0.91
COL12A1-204ENST00000419671 UVSSAQ2YD98 709 aa9.34□□□□□ -0.91
COL12A1-204ENST00000419671 CCDC93Q567U6 631 aa9.34□□□□□ -0.91
COL12A1-204ENST00000419671 CLIC6Q96NY7 704 aa9.34□□□□□ -0.91
COL12A1-204ENST00000419671 PSMD1Q99460 953 aa9.34□□□□□ -0.91
COL12A1-204ENST00000419671 DNAJC18Q9H819 358 aa9.34□□□□□ -0.91
COL12A1-204ENST00000419671 MTMR4Q9NYA4 1195 aa9.34□□□□□ -0.91
COL12A1-204ENST00000419671 FAM198AQ9UFP1 575 aa9.34□□□□□ -0.91
COL12A1-204ENST00000419671 HPSEQ9Y251 543 aa9.34□□□□□ -0.91
COL12A1-204ENST00000419671 MYO3BQ8WXR4 1341 aa9.34□□□□□ -0.91
COL12A1-204ENST00000419671 FAM237AA0A1B0GTK4 181 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 DDTLA6NHG4 134 aaPredicted RBP9.33□□□□□ -0.92
COL12A1-204ENST00000419671 ZNF202O95125 648 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 TOP1P11387 765 aaKnown RBP9.33□□□□□ -0.92
COL12A1-204ENST00000419671 GNAQP50148 359 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 GRIN1Q05586 938 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 TCP10Q12799 353 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 HSP90AA2PQ14568 343 aaPredicted RBP9.33□□□□□ -0.92
COL12A1-204ENST00000419671 ANO6Q4KMQ2 910 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 GRIPAP1Q4V328 841 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 TYW1BQ6NUM6 668 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 USP17L2Q6R6M4 530 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 POTEDQ86YR6 584 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 CLEC10AQ8IUN9 316 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 RTKN2Q8IZC4 609 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 JMYQ8N9B5 988 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 ERCC4Q92889 916 aaPredicted RBP9.33□□□□□ -0.92
COL12A1-204ENST00000419671 IDI2Q9BXS1 227 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 CPVLQ9H3G5 476 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 SWAP70Q9UH65 585 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 FBXO2Q9UK22 296 aaPredicted RBP9.33□□□□□ -0.92
COL12A1-204ENST00000419671 KLRF2D3W0D1 207 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 AP5Z1O43299 807 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 PDHBP11177 359 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 RBM5P52756 815 aaKnown RBP eCLIP9.33□□□□□ -0.92
COL12A1-204ENST00000419671 RESP18Q5W5W9 173 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 SASS6Q6UVJ0 657 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 SH3BP5LQ7L8J4 393 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 FBXO22Q8NEZ5 403 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 FAM200AQ8TCP9 573 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 GPKOWQ92917 476 aaPredicted RBP eCLIP9.33□□□□□ -0.92
COL12A1-204ENST00000419671 EHD4Q9H223 541 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 ZNF277Q9NRM2 450 aaPredicted RBP9.33□□□□□ -0.92
COL12A1-204ENST00000419671 USP25Q9UHP3 1055 aa9.33□□□□□ -0.92
COL12A1-204ENST00000419671 M0R2N6 131 aa9.32□□□□□ -0.92
COL12A1-204ENST00000419671 CUTAO60888 179 aa9.32□□□□□ -0.92
COL12A1-204ENST00000419671 ZBTB7AO95365 584 aa9.32□□□□□ -0.92
COL12A1-204ENST00000419671 HLA-DOAP06340 250 aa9.32□□□□□ -0.92
COL12A1-204ENST00000419671 PTPREP23469 700 aa9.32□□□□□ -0.92
COL12A1-204ENST00000419671 NLRP5P59047 1200 aa9.32□□□□□ -0.92
COL12A1-204ENST00000419671 WWC2Q6AWC2 1192 aa9.32□□□□□ -0.92
COL12A1-204ENST00000419671 LUZP1Q86V48 1076 aa9.32□□□□□ -0.92
COL12A1-204ENST00000419671 LRRC47Q8N1G4 583 aaKnown RBP9.32□□□□□ -0.92
COL12A1-204ENST00000419671 KRI1Q8N9T8 703 aaKnown RBP9.32□□□□□ -0.92
COL12A1-204ENST00000419671 PRMT6Q96LA8 375 aaPredicted RBP9.32□□□□□ -0.92
COL12A1-204ENST00000419671 SPZ1Q9BXG8 430 aa9.32□□□□□ -0.92
COL12A1-204ENST00000419671 DNAJC25Q9H1X3 360 aa9.32□□□□□ -0.92
COL12A1-204ENST00000419671 TDRD3Q9H7E2 651 aaKnown RBP9.32□□□□□ -0.92
COL12A1-204ENST00000419671 BRMS1Q9HCU9 246 aa9.32□□□□□ -0.92
COL12A1-204ENST00000419671 SH3GLB2Q9NR46 395 aa9.32□□□□□ -0.92
COL12A1-204ENST00000419671 MORC2Q9Y6X9 1032 aaPredicted RBP9.32□□□□□ -0.92
COL12A1-204ENST00000419671 A0A087WWV3 80 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 FAM196BA6NMK8 535 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 USP17L5A8MUK1 530 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 STXBP3O00186 592 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 PARP1P09874 1014 aaKnown RBP9.31□□□□□ -0.92
COL12A1-204ENST00000419671 SNHG28P0DPA3 235 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 ATP2B1P20020 1258 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 SYKP43405 635 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 EIF6P56537 245 aaKnown RBP9.31□□□□□ -0.92
COL12A1-204ENST00000419671 SHROOM1Q2M3G4 852 aaPredicted RBP9.31□□□□□ -0.92
COL12A1-204ENST00000419671 CFAP100Q494V2 611 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 SPECC1Q5M775 1068 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 TRIM44Q96DX7 344 aaPredicted RBP9.31□□□□□ -0.92
COL12A1-204ENST00000419671 LZTS2Q9BRK4 669 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 DHX36Q9H2U1 1008 aaKnown RBP9.31□□□□□ -0.92
COL12A1-204ENST00000419671 CBX8Q9HC52 389 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 BARHL2Q9NY43 387 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 ATRNL1Q5VV63 1379 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 COL2A1P02458 1487 aaPredicted RBP9.31□□□□□ -0.92
COL12A1-204ENST00000419671 TRIM75PA6NK02 468 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 PSMD14O00487 310 aa9.31□□□□□ -0.92
COL12A1-204ENST00000419671 PITPNM1O00562 1244 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms