RNA–Protein interactions for RNA: ENST00000419437.5

THUMPD3-204, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-204ENST00000419437 INCENPQ9NQS7 918 aa13.93□□□□□ -0.18
THUMPD3-204ENST00000419437 BTBD7Q9P203 1132 aa13.93□□□□□ -0.18
THUMPD3-204ENST00000419437 CLIP2Q9UDT6 1046 aa13.93□□□□□ -0.18
THUMPD3-204ENST00000419437 SPDYE16A6NNV3 312 aaPredicted RBP13.92□□□□□ -0.18
THUMPD3-204ENST00000419437 SOX1O00570 391 aaPredicted RBP13.92□□□□□ -0.18
THUMPD3-204ENST00000419437 CYP2B6P20813 491 aa13.92□□□□□ -0.18
THUMPD3-204ENST00000419437 PDE4AP27815 886 aa13.92□□□□□ -0.18
THUMPD3-204ENST00000419437 PDE4BQ07343 736 aa13.92□□□□□ -0.18
THUMPD3-204ENST00000419437 FAM47AQ5JRC9 791 aa13.92□□□□□ -0.18
THUMPD3-204ENST00000419437 WDR78Q5VTH9 848 aa13.92□□□□□ -0.18
THUMPD3-204ENST00000419437 TICAM2Q86XR7 235 aa13.92□□□□□ -0.18
THUMPD3-204ENST00000419437 C7orf61Q8IZ16 206 aa13.92□□□□□ -0.18
THUMPD3-204ENST00000419437 LPAR1Q92633 364 aa13.92□□□□□ -0.18
THUMPD3-204ENST00000419437 C11orf49Q9H6J7 331 aa13.92□□□□□ -0.18
THUMPD3-204ENST00000419437 FLOT1O75955 427 aa13.91□□□□□ -0.18
THUMPD3-204ENST00000419437 FGAP02671 866 aa13.91□□□□□ -0.18
THUMPD3-204ENST00000419437 PRKAR2AP13861 404 aaKnown RBP13.91□□□□□ -0.18
THUMPD3-204ENST00000419437 DSG3P32926 999 aa13.91□□□□□ -0.18
THUMPD3-204ENST00000419437 CCNA1P78396 465 aa13.91□□□□□ -0.18
THUMPD3-204ENST00000419437 TFAP4Q01664 338 aa13.91□□□□□ -0.18
THUMPD3-204ENST00000419437 TRIM32Q13049 653 aa13.91□□□□□ -0.18
THUMPD3-204ENST00000419437 LBX2Q6XYB7 198 aa13.91□□□□□ -0.18
THUMPD3-204ENST00000419437 GPR142Q7Z601 462 aa13.91□□□□□ -0.18
THUMPD3-204ENST00000419437 PLEKHH3Q7Z736 793 aa13.91□□□□□ -0.18
THUMPD3-204ENST00000419437 ZNF589Q86UQ0 364 aaPredicted RBP13.91□□□□□ -0.18
THUMPD3-204ENST00000419437 USP6NLQ92738 828 aa13.91□□□□□ -0.18
THUMPD3-204ENST00000419437 LRCH3Q96II8 777 aa13.91□□□□□ -0.18
THUMPD3-204ENST00000419437 GOPCQ9HD26 462 aa13.91□□□□□ -0.18
THUMPD3-204ENST00000419437 NYAP2Q9P242 653 aa13.91□□□□□ -0.18
THUMPD3-204ENST00000419437 FRMPD3Q5JV73 1810 aa13.91□□□□□ -0.18
THUMPD3-204ENST00000419437 MYH8P13535 1937 aa13.91□□□□□ -0.18
THUMPD3-204ENST00000419437 ROBO3Q96MS0 1386 aa13.91□□□□□ -0.18
THUMPD3-204ENST00000419437 F5H6K3 240 aa13.9□□□□□ -0.18
THUMPD3-204ENST00000419437 TSPY3P0CV98 308 aa13.9□□□□□ -0.18
THUMPD3-204ENST00000419437 TSPY8P0CW00 308 aa13.9□□□□□ -0.18
THUMPD3-204ENST00000419437 HSPD1P10809 573 aaKnown RBP13.9□□□□□ -0.18
THUMPD3-204ENST00000419437 ZKSCAN1P17029 563 aaPredicted RBP13.9□□□□□ -0.18
THUMPD3-204ENST00000419437 KLRC3Q07444 240 aa13.9□□□□□ -0.18
THUMPD3-204ENST00000419437 ALX1Q15699 326 aa13.9□□□□□ -0.18
THUMPD3-204ENST00000419437 LRIT3Q3SXY7 679 aa13.9□□□□□ -0.18
THUMPD3-204ENST00000419437 CWC27Q6UX04 472 aaKnown RBP13.9□□□□□ -0.18
THUMPD3-204ENST00000419437 SLC17A8Q8NDX2 589 aa13.9□□□□□ -0.18
THUMPD3-204ENST00000419437 ATG4CQ96DT6 458 aa13.9□□□□□ -0.18
THUMPD3-204ENST00000419437 FBXO28Q9NVF7 368 aa13.9□□□□□ -0.18
THUMPD3-204ENST00000419437 MTMR4Q9NYA4 1195 aa13.9□□□□□ -0.18
THUMPD3-204ENST00000419437 PRUNE2Q8WUY3 3088 aa13.9□□□□□ -0.18
THUMPD3-204ENST00000419437 IGKV6D-41A0A0C4DH26 115 aa13.89□□□□□ -0.19
THUMPD3-204ENST00000419437 WDR46O15213 610 aaKnown RBP13.89□□□□□ -0.19
THUMPD3-204ENST00000419437 COL6A1P12109 1028 aa13.89□□□□□ -0.19
THUMPD3-204ENST00000419437 RGS2P41220 211 aa13.89□□□□□ -0.19
THUMPD3-204ENST00000419437 PLS1Q14651 629 aa13.89□□□□□ -0.19
THUMPD3-204ENST00000419437 MORN1Q5T089 497 aa13.89□□□□□ -0.19
THUMPD3-204ENST00000419437 FAM83BQ5T0W9 1011 aa13.89□□□□□ -0.19
THUMPD3-204ENST00000419437 NEDD1Q8NHV4 660 aa13.89□□□□□ -0.19
THUMPD3-204ENST00000419437 CEP95Q96GE4 821 aa13.89□□□□□ -0.19
THUMPD3-204ENST00000419437 NUP88Q99567 741 aaPredicted RBP13.89□□□□□ -0.19
THUMPD3-204ENST00000419437 APBA2Q99767 749 aa13.89□□□□□ -0.19
THUMPD3-204ENST00000419437 TOMM22Q9NS69 142 aa13.89□□□□□ -0.19
THUMPD3-204ENST00000419437 DIAPH3Q9NSV4 1193 aa13.89□□□□□ -0.19
THUMPD3-204ENST00000419437 TACC3Q9Y6A5 838 aa13.89□□□□□ -0.19
THUMPD3-204ENST00000419437 PFASO15067 1338 aa13.89□□□□□ -0.19
THUMPD3-204ENST00000419437 CCDC171Q6TFL3 1326 aa13.89□□□□□ -0.19
THUMPD3-204ENST00000419437 VCANP13611 3396 aa13.88□□□□□ -0.19
THUMPD3-204ENST00000419437 TSPY2A6NKD2 308 aa13.88□□□□□ -0.19
THUMPD3-204ENST00000419437 RANBP6O60518 1105 aaKnown RBP13.88□□□□□ -0.19
THUMPD3-204ENST00000419437 MFAP1P55081 439 aaKnown RBP13.88□□□□□ -0.19
THUMPD3-204ENST00000419437 CACNB2Q08289 660 aaPredicted RBP13.88□□□□□ -0.19
THUMPD3-204ENST00000419437 TDHQ8IZJ6 230 aa13.88□□□□□ -0.19
THUMPD3-204ENST00000419437 MKL1Q969V6 931 aa13.88□□□□□ -0.19
THUMPD3-204ENST00000419437 CHMP4CQ96CF2 233 aa13.88□□□□□ -0.19
THUMPD3-204ENST00000419437 MOV10L1Q9BXT6 1211 aaKnown RBP13.88□□□□□ -0.19
THUMPD3-204ENST00000419437 SPATC1LQ9H0A9 340 aa13.88□□□□□ -0.19
THUMPD3-204ENST00000419437 ANAPC4Q9UJX5 808 aa13.88□□□□□ -0.19
THUMPD3-204ENST00000419437 ZMYND8Q9ULU4 1186 aaPredicted RBP13.88□□□□□ -0.19
THUMPD3-204ENST00000419437 IVNS1ABPQ9Y6Y0 642 aa13.88□□□□□ -0.19
THUMPD3-204ENST00000419437 HIP1O00291 1037 aa13.87□□□□□ -0.19
THUMPD3-204ENST00000419437 TTLL1O95922 423 aa13.87□□□□□ -0.19
THUMPD3-204ENST00000419437 NDUFB10O96000 172 aa13.87□□□□□ -0.19
THUMPD3-204ENST00000419437 PTPREP23469 700 aa13.87□□□□□ -0.19
THUMPD3-204ENST00000419437 MAGEA10P43363 369 aaPredicted RBP13.87□□□□□ -0.19
THUMPD3-204ENST00000419437 HAND2P61296 217 aa13.87□□□□□ -0.19
THUMPD3-204ENST00000419437 RRP12Q5JTH9 1297 aaKnown RBP13.87□□□□□ -0.19
THUMPD3-204ENST00000419437 LHX8Q68G74 356 aa13.87□□□□□ -0.19
THUMPD3-204ENST00000419437 LRRC47Q8N1G4 583 aaKnown RBP13.87□□□□□ -0.19
THUMPD3-204ENST00000419437 MB21D1Q8N884 522 aa13.87□□□□□ -0.19
THUMPD3-204ENST00000419437 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.87□□□□□ -0.19
THUMPD3-204ENST00000419437 SLC15A5A6NIM6 579 aa13.86□□□□□ -0.19
THUMPD3-204ENST00000419437 DLL1O00548 723 aa13.86□□□□□ -0.19
THUMPD3-204ENST00000419437 NMT2O60551 498 aa13.86□□□□□ -0.19
THUMPD3-204ENST00000419437 ERCC3P19447 782 aa13.86□□□□□ -0.19
THUMPD3-204ENST00000419437 MAP2K5Q13163 448 aa13.86□□□□□ -0.19
THUMPD3-204ENST00000419437 CCL14Q16627 93 aa13.86□□□□□ -0.19
THUMPD3-204ENST00000419437 TTC22Q5TAA0 569 aa13.86□□□□□ -0.19
THUMPD3-204ENST00000419437 NCAPG2Q86XI2 1143 aa13.86□□□□□ -0.19
THUMPD3-204ENST00000419437 DEFB123Q8N688 67 aa13.86□□□□□ -0.19
THUMPD3-204ENST00000419437 PPP1R9AQ9ULJ8 1098 aa13.86□□□□□ -0.19
THUMPD3-204ENST00000419437 ISY1Q9ULR0 285 aaKnown RBP13.86□□□□□ -0.19
THUMPD3-204ENST00000419437 VWA5AO00534 786 aa13.85□□□□□ -0.19
THUMPD3-204ENST00000419437 MSCO60682 206 aa13.85□□□□□ -0.19
THUMPD3-204ENST00000419437 GSPT1P15170 499 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms