RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 HMX1Q9NP08 348 aaPredicted RBP19.58■□□□□ 0.72
LINC00404-201ENST00000418660 SYNPO2Q9UMS6 1093 aa19.58■□□□□ 0.72
LINC00404-201ENST00000418660 ADAMTS5Q9UNA0 930 aa19.58■□□□□ 0.72
LINC00404-201ENST00000418660 IVNS1ABPQ9Y6Y0 642 aa19.58■□□□□ 0.72
LINC00404-201ENST00000418660 A0A0G2JMZ2 1700 aa19.58■□□□□ 0.72
LINC00404-201ENST00000418660 TTLL1O95922 423 aa19.57■□□□□ 0.72
LINC00404-201ENST00000418660 ZKSCAN1P17029 563 aaPredicted RBP19.57■□□□□ 0.72
LINC00404-201ENST00000418660 FAM47AQ5JRC9 791 aa19.57■□□□□ 0.72
LINC00404-201ENST00000418660 MAP3K21Q5TCX8 1036 aa19.57■□□□□ 0.72
LINC00404-201ENST00000418660 FBXO28Q9NVF7 368 aa19.57■□□□□ 0.72
LINC00404-201ENST00000418660 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.57■□□□□ 0.72
LINC00404-201ENST00000418660 STRNO43815 780 aa19.56■□□□□ 0.72
LINC00404-201ENST00000418660 NDUFB10O96000 172 aa19.56■□□□□ 0.72
LINC00404-201ENST00000418660 FGAP02671 866 aa19.56■□□□□ 0.72
LINC00404-201ENST00000418660 TFRCP02786 760 aaKnown RBP19.56■□□□□ 0.72
LINC00404-201ENST00000418660 HSPD1P10809 573 aaKnown RBP19.56■□□□□ 0.72
LINC00404-201ENST00000418660 CTDSPL2Q05D32 466 aa19.56■□□□□ 0.72
LINC00404-201ENST00000418660 GRB14Q14449 540 aa19.56■□□□□ 0.72
LINC00404-201ENST00000418660 CCL14Q16627 93 aa19.56■□□□□ 0.72
LINC00404-201ENST00000418660 SAMD1Q6SPF0 538 aaPredicted RBP19.56■□□□□ 0.72
LINC00404-201ENST00000418660 UBE2Q1Q7Z7E8 422 aa19.56■□□□□ 0.72
LINC00404-201ENST00000418660 ZNF589Q86UQ0 364 aaPredicted RBP19.56■□□□□ 0.72
LINC00404-201ENST00000418660 CRISPLD2Q9H0B8 497 aa19.56■□□□□ 0.72
LINC00404-201ENST00000418660 MROH8Q9H579 483 aa19.56■□□□□ 0.72
LINC00404-201ENST00000418660 PPP1R9AQ9ULJ8 1098 aa19.56■□□□□ 0.72
LINC00404-201ENST00000418660 CCDC171Q6TFL3 1326 aa19.55■□□□□ 0.72
LINC00404-201ENST00000418660 HOXC6P09630 235 aa19.55■□□□□ 0.72
LINC00404-201ENST00000418660 ERCC3P19447 782 aa19.55■□□□□ 0.72
LINC00404-201ENST00000418660 MFAP1P55081 439 aaKnown RBP19.55■□□□□ 0.72
LINC00404-201ENST00000418660 PLS1Q14651 629 aa19.55■□□□□ 0.72
LINC00404-201ENST00000418660 TMEM132BQ14DG7 1078 aa19.55■□□□□ 0.72
LINC00404-201ENST00000418660 PPP4R3BQ5MIZ7 849 aa19.55■□□□□ 0.72
LINC00404-201ENST00000418660 NUP88Q99567 741 aaPredicted RBP19.55■□□□□ 0.72
LINC00404-201ENST00000418660 PDE4DIPQ5VU43 2346 aa19.54■□□□□ 0.72
LINC00404-201ENST00000418660 ZMYM6O95789 1325 aa19.54■□□□□ 0.72
LINC00404-201ENST00000418660 VWA5AO00534 786 aa19.54■□□□□ 0.72
LINC00404-201ENST00000418660 SLC25A27O95847 323 aa19.54■□□□□ 0.72
LINC00404-201ENST00000418660 FGRP09769 529 aa19.54■□□□□ 0.72
LINC00404-201ENST00000418660 PRKAR2AP13861 404 aaKnown RBP19.54■□□□□ 0.72
LINC00404-201ENST00000418660 CACNB2Q08289 660 aaPredicted RBP19.54■□□□□ 0.72
LINC00404-201ENST00000418660 GMCL1P1Q8NEA9 526 aa19.54■□□□□ 0.72
LINC00404-201ENST00000418660 SLF1Q9BQI6 1058 aa19.54■□□□□ 0.72
LINC00404-201ENST00000418660 INCENPQ9NQS7 918 aa19.54■□□□□ 0.72
LINC00404-201ENST00000418660 BRCA2P51587 3418 aa19.54■□□□□ 0.72
LINC00404-201ENST00000418660 TSPY2A6NKD2 308 aa19.53■□□□□ 0.72
LINC00404-201ENST00000418660 HIP1O00291 1037 aa19.53■□□□□ 0.72
LINC00404-201ENST00000418660 ORC4O43929 436 aa19.53■□□□□ 0.72
LINC00404-201ENST00000418660 FARP2O94887 1054 aaPredicted RBP19.53■□□□□ 0.72
LINC00404-201ENST00000418660 PDE4AP27815 886 aa19.53■□□□□ 0.72
LINC00404-201ENST00000418660 NCAPG2Q86XI2 1143 aa19.53■□□□□ 0.72
LINC00404-201ENST00000418660 LRRC47Q8N1G4 583 aaKnown RBP19.53■□□□□ 0.72
LINC00404-201ENST00000418660 DIAPH3Q9NSV4 1193 aa19.53■□□□□ 0.72
LINC00404-201ENST00000418660 TACC3Q9Y6A5 838 aa19.53■□□□□ 0.72
LINC00404-201ENST00000418660 PARP14Q460N5 1801 aa19.53■□□□□ 0.72
LINC00404-201ENST00000418660 ADORA2AP29274 412 aa19.52■□□□□ 0.72
LINC00404-201ENST00000418660 MFSD14CQ5VZR4 134 aa19.52■□□□□ 0.72
LINC00404-201ENST00000418660 DPP9Q86TI2 863 aa19.52■□□□□ 0.72
LINC00404-201ENST00000418660 RIOX2Q8IUF8 465 aa19.52■□□□□ 0.72
LINC00404-201ENST00000418660 ABRAQ8N0Z2 381 aa19.52■□□□□ 0.72
LINC00404-201ENST00000418660 PRPF38AQ8NAV1 312 aaKnown RBP19.52■□□□□ 0.72
LINC00404-201ENST00000418660 REPS2Q8NFH8 660 aa19.52■□□□□ 0.72
LINC00404-201ENST00000418660 NPLOC4Q8TAT6 608 aa19.52■□□□□ 0.72
LINC00404-201ENST00000418660 FLRT1Q9NZU1 646 aa19.52■□□□□ 0.72
LINC00404-201ENST00000418660 RANBP6O60518 1105 aaKnown RBP19.51■□□□□ 0.71
LINC00404-201ENST00000418660 STAT3P40763 770 aa19.51■□□□□ 0.71
LINC00404-201ENST00000418660 SLFN13Q68D06 897 aa19.51■□□□□ 0.71
LINC00404-201ENST00000418660 CWC27Q6UX04 472 aaKnown RBP19.51■□□□□ 0.71
LINC00404-201ENST00000418660 ANKLE1Q8NAG6 615 aa19.51■□□□□ 0.71
LINC00404-201ENST00000418660 IL17RBQ9NRM6 502 aa19.51■□□□□ 0.71
LINC00404-201ENST00000418660 FEM1BQ9UK73 627 aa19.51■□□□□ 0.71
LINC00404-201ENST00000418660 ZNF214Q9UL59 606 aaPredicted RBP19.51■□□□□ 0.71
LINC00404-201ENST00000418660 ZNF236Q9UL36 1845 aa19.51■□□□□ 0.71
LINC00404-201ENST00000418660 FCER1AP12319 257 aa19.5■□□□□ 0.71
LINC00404-201ENST00000418660 BMP3P12645 472 aa19.5■□□□□ 0.71
LINC00404-201ENST00000418660 COPB2P35606 906 aa19.5■□□□□ 0.71
LINC00404-201ENST00000418660 HTATIP2Q9BUP3 242 aa19.5■□□□□ 0.71
LINC00404-201ENST00000418660 SLC5A4Q9NY91 659 aa19.5■□□□□ 0.71
LINC00404-201ENST00000418660 STX8Q9UNK0 236 aa19.5■□□□□ 0.71
LINC00404-201ENST00000418660 MYH4Q9Y623 1939 aa19.5■□□□□ 0.71
LINC00404-201ENST00000418660 COBLO75128 1261 aa19.49■□□□□ 0.71
LINC00404-201ENST00000418660 IGHA2P01877 340 aa19.49■□□□□ 0.71
LINC00404-201ENST00000418660 CCND3P30281 292 aaPredicted RBP19.49■□□□□ 0.71
LINC00404-201ENST00000418660 NOVP48745 357 aa19.49■□□□□ 0.71
LINC00404-201ENST00000418660 OLFML2BQ68BL8 750 aa19.49■□□□□ 0.71
LINC00404-201ENST00000418660 GMCL1Q96IK5 515 aa19.49■□□□□ 0.71
LINC00404-201ENST00000418660 TOMM22Q9NS69 142 aa19.49■□□□□ 0.71
LINC00404-201ENST00000418660 OGDHLQ9ULD0 1010 aa19.49■□□□□ 0.71
LINC00404-201ENST00000418660 ATP2A1O14983 1001 aa19.48■□□□□ 0.71
LINC00404-201ENST00000418660 NMT2O60551 498 aa19.48■□□□□ 0.71
LINC00404-201ENST00000418660 ZBED4O75132 1171 aa19.48■□□□□ 0.71
LINC00404-201ENST00000418660 PCP11498 1178 aaKnown RBP19.48■□□□□ 0.71
LINC00404-201ENST00000418660 HAND2P61296 217 aa19.48■□□□□ 0.71
LINC00404-201ENST00000418660 RRP12Q5JTH9 1297 aaKnown RBP19.48■□□□□ 0.71
LINC00404-201ENST00000418660 TTC22Q5TAA0 569 aa19.48■□□□□ 0.71
LINC00404-201ENST00000418660 KIFC2Q96AC6 838 aa19.48■□□□□ 0.71
LINC00404-201ENST00000418660 MMP19Q99542 508 aa19.48■□□□□ 0.71
LINC00404-201ENST00000418660 TEX13BQ9BXU2 312 aa19.48■□□□□ 0.71
LINC00404-201ENST00000418660 COL11A1P12107 1806 aaPredicted RBP19.47■□□□□ 0.71
LINC00404-201ENST00000418660 GSPT1P15170 499 aaKnown RBP19.47■□□□□ 0.71
LINC00404-201ENST00000418660 CYP2C19P33261 490 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms