RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 SIPA1L1O43166 1804 aa11.65□□□□□ -0.54
HMGA1P6-201ENST00000418454 PNMA6FA0A0J9YX94 578 aa11.65□□□□□ -0.54
HMGA1P6-201ENST00000418454 USP17L5A8MUK1 530 aa11.65□□□□□ -0.54
HMGA1P6-201ENST00000418454 PLEKHA8P1O95397 391 aa11.65□□□□□ -0.54
HMGA1P6-201ENST00000418454 YEATS4O95619 227 aa11.65□□□□□ -0.54
HMGA1P6-201ENST00000418454 BMP15O95972 392 aa11.65□□□□□ -0.54
HMGA1P6-201ENST00000418454 EGFRP00533 1210 aa11.65□□□□□ -0.54
HMGA1P6-201ENST00000418454 SLC1A4P43007 532 aa11.65□□□□□ -0.54
HMGA1P6-201ENST00000418454 HIRAP54198 1017 aaPredicted RBP11.65□□□□□ -0.54
HMGA1P6-201ENST00000418454 USP14P54578 494 aa11.65□□□□□ -0.54
HMGA1P6-201ENST00000418454 UBE2HP62256 183 aa11.65□□□□□ -0.54
HMGA1P6-201ENST00000418454 USP48Q86UV5 1035 aa11.65□□□□□ -0.54
HMGA1P6-201ENST00000418454 NOSTRINQ8IVI9 506 aa11.65□□□□□ -0.54
HMGA1P6-201ENST00000418454 CHURC1Q8WUH1 139 aa11.65□□□□□ -0.54
HMGA1P6-201ENST00000418454 KIAA1683Q9H0B3 1180 aa11.65□□□□□ -0.54
HMGA1P6-201ENST00000418454 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.65□□□□□ -0.54
HMGA1P6-201ENST00000418454 DCAF8L1A6NGE4 600 aa11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 C19orf81C9J6K1 198 aa11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 CYTH3O43739 400 aa11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 TRAK2O60296 914 aa11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 BMP3P12645 472 aa11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 KRT2P35908 639 aa11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 NASPP49321 788 aaPredicted RBP11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 ORC2Q13416 577 aaPredicted RBP11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 MYSM1Q5VVJ2 828 aa11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 USP17L2Q6R6M4 530 aa11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 FAM160B2Q86V87 743 aa11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 RAB11FIP4Q86YS3 637 aa11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 SULF1Q8IWU6 871 aa11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 SCYL3Q8IZE3 742 aa11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 STAG2Q8N3U4 1231 aa11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 SAMD3Q8N6K7 520 aa11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 KCNG4Q8TDN1 519 aa11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 ZMYND12Q9H0C1 365 aa11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 VCPKMTQ9H867 229 aa11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 CEP131Q9UPN4 1083 aa11.64□□□□□ -0.55
HMGA1P6-201ENST00000418454 SHTN1A0MZ66 631 aa11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 ZBTB5O15062 677 aa11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 PPP1R12BO60237 982 aaPredicted RBP11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 PPP6R2O75170 966 aa11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 PRPF40AO75400 957 aaKnown RBP11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 EPHX2P34913 555 aa11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 NF2P35240 595 aa11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 DNM1Q05193 864 aaKnown RBP11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 GNL2Q13823 731 aaKnown RBP11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 MAP3K11Q16584 847 aa11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 DIS3L2Q8IYB7 885 aaKnown RBP11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 JMYQ8N9B5 988 aa11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 RBM46Q8TBY0 533 aaKnown RBP11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 TRPM4Q8TD43 1214 aa11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 KLRG1Q96E93 195 aa11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 C6orf50Q9HD87 102 aa11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 GGA3Q9NZ52 723 aa11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 FEM1BQ9UK73 627 aa11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 ISY1Q9ULR0 285 aaKnown RBP11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 PCDHA4Q9UN74 947 aa11.63□□□□□ -0.55
HMGA1P6-201ENST00000418454 LETM1O95202 739 aaPredicted RBP11.62□□□□□ -0.55
HMGA1P6-201ENST00000418454 GDF11O95390 407 aa11.62□□□□□ -0.55
HMGA1P6-201ENST00000418454 NDUFB10O96000 172 aa11.62□□□□□ -0.55
HMGA1P6-201ENST00000418454 NLRP5P59047 1200 aa11.62□□□□□ -0.55
HMGA1P6-201ENST00000418454 RRP1BQ14684 758 aaKnown RBP11.62□□□□□ -0.55
HMGA1P6-201ENST00000418454 NBPF12Q5TAG4 269 aaPredicted RBP11.62□□□□□ -0.55
HMGA1P6-201ENST00000418454 MIGA2Q7L4E1 593 aa11.62□□□□□ -0.55
HMGA1P6-201ENST00000418454 CCDC82Q8N4S0 544 aa11.62□□□□□ -0.55
HMGA1P6-201ENST00000418454 SYAP1Q96A49 352 aaPredicted RBP11.62□□□□□ -0.55
HMGA1P6-201ENST00000418454 SPATA32Q96LK8 384 aa11.62□□□□□ -0.55
HMGA1P6-201ENST00000418454 C12orf42Q96LP6 360 aa11.62□□□□□ -0.55
HMGA1P6-201ENST00000418454 NOL7Q9UMY1 257 aaKnown RBP11.62□□□□□ -0.55
HMGA1P6-201ENST00000418454 SCN4AP35499 1836 aa11.62□□□□□ -0.55
HMGA1P6-201ENST00000418454 MYH8P13535 1937 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 A0A1W2PQ27 194 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 A0A1W2PQ64 194 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 A0A1W2PQD8 194 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 A0A1W2PRG0 241 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 USP17L10C9JJH3 530 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 M0R2N6 131 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 STXBP3O00186 592 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 WDR46O15213 610 aaKnown RBP11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 MRPL12P52815 198 aaKnown RBP11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 MAP3K9P80192 1104 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 SLC39A14Q15043 492 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 ANO1Q5XXA6 986 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 ADALQ6DHV7 355 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 FERMT3Q86UX7 667 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 ADGRF4Q8IZF3 695 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 BLIDQ8IZY5 108 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 CMTR1Q8N1G2 835 aaKnown RBP11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 LRRC47Q8N1G4 583 aaKnown RBP11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 LINC00301Q8NCQ3 95 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 LEO1Q8WVC0 666 aaPredicted RBP11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 TNFRSF25Q93038 417 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 NAP1L4Q99733 375 aaKnown RBP11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 TAF1DQ9H5J8 278 aaPredicted RBP11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 JMJD4Q9H9V9 463 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 PICK1Q9NRD5 415 aa11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 MAP3K20Q9NYL2 800 aaKnown RBP11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 DDX49Q9Y6V7 483 aaKnown RBP11.61□□□□□ -0.55
HMGA1P6-201ENST00000418454 WDR90Q96KV7 1748 aa11.6□□□□□ -0.55
HMGA1P6-201ENST00000418454 GOLGA6L4A6NEF3 574 aa11.6□□□□□ -0.55
HMGA1P6-201ENST00000418454 FAM196BA6NMK8 535 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms