RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 ABT1Q9ULW3 272 aaKnown RBP12.37□□□□□ -0.43
PTCH1-205ENST00000418258 LRRIQ4A6NIV6 560 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 ERVV-2B6SEH9 535 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 KRT15P19012 456 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 CCDC94Q9BW85 323 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-205ENST00000418258 DDX25Q9UHL0 483 aaKnown RBP12.37□□□□□ -0.43
PTCH1-205ENST00000418258 AKT3Q9Y243 479 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 TYW5A2RUC4 315 aaKnown RBP12.37□□□□□ -0.43
PTCH1-205ENST00000418258 DLATP10515 647 aaKnown RBP12.37□□□□□ -0.43
PTCH1-205ENST00000418258 TSTA3Q13630 321 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-205ENST00000418258 TBX22Q9Y458 520 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 KIAA0556O60303 1618 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 CFAP74Q9C0B2 1584 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 RLBP1P12271 317 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 CMTR1Q8N1G2 835 aaKnown RBP12.37□□□□□ -0.43
PTCH1-205ENST00000418258 KRT12Q99456 494 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 BABAM1Q9NWV8 329 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 CCDC170Q8IYT3 715 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 SDR42E1Q8WUS8 393 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 ZHX1Q9UKY1 873 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-205ENST00000418258 WDR46O15213 610 aaKnown RBP12.36□□□□□ -0.43
PTCH1-205ENST00000418258 LONRF3Q496Y0 759 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 PPFIBP2Q8ND30 876 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 USP17L12C9JPN9 530 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 USP17L21D6R901 530 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 GYG1P46976 350 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 AP5M1Q9H0R1 490 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 TAB2Q9NYJ8 693 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 SYNJ2BP-COX16A0A087WUM0 186 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 TRIM37O94972 964 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 RNASELQ05823 741 aaKnown RBP12.36□□□□□ -0.43
PTCH1-205ENST00000418258 SH2D4BQ5SQS7 431 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 DENND2CQ68D51 928 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 FBXO11Q86XK2 927 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 KLHL7Q8IXQ5 586 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 STAMQ92783 540 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 CNKSR1Q969H4 720 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 HAUS1Q96CS2 278 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 ATP8A2Q9NTI2 1148 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 COX16Q9P0S2 106 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 LRFN2Q9ULH4 789 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 THRAP3Q9Y2W1 955 aaKnown RBP12.36□□□□□ -0.43
PTCH1-205ENST00000418258 OSBPP22059 807 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 MAP7Q14244 749 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 TYW1BQ6NUM6 668 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 PALM2Q8IXS6 379 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 LSM14BQ9BX40 385 aaKnown RBP12.36□□□□□ -0.43
PTCH1-205ENST00000418258 PIK3CAP42336 1068 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 EVCP57679 992 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 POLA2Q14181 598 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 FAM160B1Q5W0V3 765 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 MLKLQ8NB16 471 aa12.36□□□□□ -0.43
PTCH1-205ENST00000418258 RRAGAQ7L523 313 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 VCX3BQ9H321 246 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 MCUR1Q96AQ8 359 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 ZSCAN10Q96SZ4 725 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-205ENST00000418258 PANK4Q9NVE7 773 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 PLEKHG3A1L390 1219 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 PFDN6O15212 129 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 NME8Q8N427 588 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 DISC1Q9NRI5 854 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 FAM207AQ9NSI2 230 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-205ENST00000418258 SEPT9Q9UHD8 586 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-205ENST00000418258 TLR3O15455 904 aaKnown RBP12.35□□□□□ -0.43
PTCH1-205ENST00000418258 POMGNT1Q8WZA1 660 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 RAB3IPQ96QF0 476 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-205ENST00000418258 C1orf112Q9NSG2 853 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 IRAK4Q9NWZ3 460 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 USP19O94966 1318 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 FANCCQ00597 558 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 SEPT6Q14141 434 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 RPS6KA1Q15418 735 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 ABCB5Q2M3G0 1257 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 ABCB4P21439 1286 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 ICA1Q05084 483 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 TMCO4Q5TGY1 634 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 RYBPQ8N488 228 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-205ENST00000418258 TEKT3Q9BXF9 490 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 SNX14Q9Y5W7 946 aa12.35□□□□□ -0.43
PTCH1-205ENST00000418258 PLXNC1O60486 1568 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 PPEF1O14829 653 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-205ENST00000418258 GSTA1P08263 222 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 GSTA2P09210 222 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 HOXB7P09629 217 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 XPAP23025 273 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-205ENST00000418258 STAT1P42224 750 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 KRT26Q7Z3Y9 468 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 FAM178BQ8IXR5 827 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 PPP4R1Q8TF05 950 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 HESX1Q9UBX0 185 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 KDRP35968 1356 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 NEURL1BA8MQ27 555 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 E7EWF7 191 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 TMEM191BP0C7N4 346 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 CTAGE3PQ8IX95 158 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 VPS37BQ9H9H4 285 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 BCAMP50895 628 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 MAIP1Q8WWC4 291 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 SCYL1Q96KG9 808 aa12.34□□□□□ -0.43
PTCH1-205ENST00000418258 CCDC68Q9H2F9 335 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms