RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 CLEC10AQ8IUN9 316 aa22.08■■□□□ 1.13
RAB3IP-205ENST00000417413 GPKOWQ92917 476 aaPredicted RBP eCLIP22.08■■□□□ 1.13
RAB3IP-205ENST00000417413 NFKBIEO00221 500 aa22.07■■□□□ 1.12
RAB3IP-205ENST00000417413 TTLL1O95922 423 aa22.07■■□□□ 1.12
RAB3IP-205ENST00000417413 SNHG28P0DPA3 235 aa22.07■■□□□ 1.12
RAB3IP-205ENST00000417413 CALML3P27482 149 aa22.07■■□□□ 1.12
RAB3IP-205ENST00000417413 TYW1BQ6NUM6 668 aa22.07■■□□□ 1.12
RAB3IP-205ENST00000417413 FOXP4Q8IVH2 680 aaPredicted RBP22.07■■□□□ 1.12
RAB3IP-205ENST00000417413 KRI1Q8N9T8 703 aaKnown RBP22.07■■□□□ 1.12
RAB3IP-205ENST00000417413 PDLIM2Q96JY6 352 aa22.07■■□□□ 1.12
RAB3IP-205ENST00000417413 CLIC6Q96NY7 704 aa22.07■■□□□ 1.12
RAB3IP-205ENST00000417413 SYT17Q9BSW7 474 aa22.07■■□□□ 1.12
RAB3IP-205ENST00000417413 CLIP2Q9UDT6 1046 aa22.07■■□□□ 1.12
RAB3IP-205ENST00000417413 FBXO2Q9UK22 296 aaPredicted RBP22.07■■□□□ 1.12
RAB3IP-205ENST00000417413 PTPREP23469 700 aa22.06■■□□□ 1.12
RAB3IP-205ENST00000417413 WWC2Q6AWC2 1192 aa22.06■■□□□ 1.12
RAB3IP-205ENST00000417413 TATDN1Q6P1N9 297 aa22.06■■□□□ 1.12
RAB3IP-205ENST00000417413 FAM177A1Q8N128 213 aaPredicted RBP22.06■■□□□ 1.12
RAB3IP-205ENST00000417413 LRRC47Q8N1G4 583 aaKnown RBP22.06■■□□□ 1.12
RAB3IP-205ENST00000417413 CPVLQ9H3G5 476 aa22.06■■□□□ 1.12
RAB3IP-205ENST00000417413 CEP131Q9UPN4 1083 aa22.06■■□□□ 1.12
RAB3IP-205ENST00000417413 SPDYE2BA6NHP3 402 aa22.06■■□□□ 1.12
RAB3IP-205ENST00000417413 TRIM75PA6NK02 468 aa22.06■■□□□ 1.12
RAB3IP-205ENST00000417413 FAM196BA6NMK8 535 aa22.06■■□□□ 1.12
RAB3IP-205ENST00000417413 STXBP3O00186 592 aa22.06■■□□□ 1.12
RAB3IP-205ENST00000417413 ZNF202O95125 648 aa22.06■■□□□ 1.12
RAB3IP-205ENST00000417413 SPDYE6P0CI01 402 aa22.06■■□□□ 1.12
RAB3IP-205ENST00000417413 TNIP1Q15025 636 aa22.06■■□□□ 1.12
RAB3IP-205ENST00000417413 SASS6Q6UVJ0 657 aa22.06■■□□□ 1.12
RAB3IP-205ENST00000417413 ZSCAN29Q8IWY8 852 aaPredicted RBP22.06■■□□□ 1.12
RAB3IP-205ENST00000417413 BARHL2Q9NY43 387 aa22.06■■□□□ 1.12
RAB3IP-205ENST00000417413 M0R2N6 131 aa22.05■■□□□ 1.12
RAB3IP-205ENST00000417413 ATP2B1P20020 1258 aa22.05■■□□□ 1.12
RAB3IP-205ENST00000417413 MMP14P50281 582 aa22.05■■□□□ 1.12
RAB3IP-205ENST00000417413 EIF6P56537 245 aaKnown RBP22.05■■□□□ 1.12
RAB3IP-205ENST00000417413 BLIDQ8IZY5 108 aa22.05■■□□□ 1.12
RAB3IP-205ENST00000417413 DAGLBQ8NCG7 672 aa22.05■■□□□ 1.12
RAB3IP-205ENST00000417413 RIOX1Q9H6W3 641 aa22.05■■□□□ 1.12
RAB3IP-205ENST00000417413 HDAC9Q9UKV0 1011 aa22.05■■□□□ 1.12
RAB3IP-205ENST00000417413 NOL7Q9UMY1 257 aaKnown RBP22.05■■□□□ 1.12
RAB3IP-205ENST00000417413 PCDHA4Q9UN74 947 aa22.05■■□□□ 1.12
RAB3IP-205ENST00000417413 ZBTB12Q9Y330 459 aaPredicted RBP22.05■■□□□ 1.12
RAB3IP-205ENST00000417413 WNT7AO00755 349 aa22.04■■□□□ 1.12
RAB3IP-205ENST00000417413 ASPRV1Q53RT3 343 aa22.04■■□□□ 1.12
RAB3IP-205ENST00000417413 OGFOD1Q8N543 542 aa22.04■■□□□ 1.12
RAB3IP-205ENST00000417413 TIGD1Q96MW7 591 aa22.04■■□□□ 1.12
RAB3IP-205ENST00000417413 SRPRBQ9Y5M8 271 aaKnown RBP22.04■■□□□ 1.12
RAB3IP-205ENST00000417413 MPHOSPH10O00566 681 aaKnown RBP22.03■■□□□ 1.12
RAB3IP-205ENST00000417413 CERKLQ49MI3 558 aaPredicted RBP22.03■■□□□ 1.12
RAB3IP-205ENST00000417413 ANO6Q4KMQ2 910 aa22.03■■□□□ 1.12
RAB3IP-205ENST00000417413 PPP4R3BQ5MIZ7 849 aa22.03■■□□□ 1.12
RAB3IP-205ENST00000417413 ZNF579Q8NAF0 562 aaKnown RBP22.03■■□□□ 1.12
RAB3IP-205ENST00000417413 AGBL3Q8NEM8 1001 aa22.03■■□□□ 1.12
RAB3IP-205ENST00000417413 CCDC148Q8NFR7 591 aa22.03■■□□□ 1.12
RAB3IP-205ENST00000417413 FAM200AQ8TCP9 573 aa22.03■■□□□ 1.12
RAB3IP-205ENST00000417413 ZNF70Q9UC06 446 aaPredicted RBP22.03■■□□□ 1.12
RAB3IP-205ENST00000417413 GRIN1Q05586 938 aa22.02■■□□□ 1.12
RAB3IP-205ENST00000417413 CXCL9Q07325 125 aa22.02■■□□□ 1.12
RAB3IP-205ENST00000417413 DLGAP5Q15398 846 aa22.02■■□□□ 1.12
RAB3IP-205ENST00000417413 CIAPIN1Q6FI81 312 aa22.02■■□□□ 1.12
RAB3IP-205ENST00000417413 GALNT17Q6IS24 598 aa22.02■■□□□ 1.12
RAB3IP-205ENST00000417413 HEATR3Q7Z4Q2 680 aa22.02■■□□□ 1.12
RAB3IP-205ENST00000417413 RRP36Q96EU6 259 aaKnown RBP22.02■■□□□ 1.12
RAB3IP-205ENST00000417413 FRMPD2Q68DX3 1309 aaPredicted RBP22.02■■□□□ 1.12
RAB3IP-205ENST00000417413 ARFGEF1Q9Y6D6 1849 aa22.02■■□□□ 1.12
RAB3IP-205ENST00000417413 SYKP43405 635 aa22.02■■□□□ 1.11
RAB3IP-205ENST00000417413 TRAPPC10P48553 1259 aa22.02■■□□□ 1.11
RAB3IP-205ENST00000417413 ZNF543Q08ER8 600 aa22.02■■□□□ 1.11
RAB3IP-205ENST00000417413 SHROOM1Q2M3G4 852 aaPredicted RBP22.02■■□□□ 1.11
RAB3IP-205ENST00000417413 TTC38Q5R3I4 469 aa22.02■■□□□ 1.11
RAB3IP-205ENST00000417413 PIK3AP1Q6ZUJ8 805 aa22.02■■□□□ 1.11
RAB3IP-205ENST00000417413 ARHGAP27Q6ZUM4 889 aa22.02■■□□□ 1.11
RAB3IP-205ENST00000417413 MTMR14Q8NCE2 650 aa22.02■■□□□ 1.11
RAB3IP-205ENST00000417413 MKL1Q969V6 931 aa22.02■■□□□ 1.11
RAB3IP-205ENST00000417413 SDF4Q9BRK5 362 aa22.02■■□□□ 1.11
RAB3IP-205ENST00000417413 UBA5Q9GZZ9 404 aa22.02■■□□□ 1.11
RAB3IP-205ENST00000417413 BMP15O95972 392 aa22.01■■□□□ 1.11
RAB3IP-205ENST00000417413 SPDYE2Q495Y8 402 aa22.01■■□□□ 1.11
RAB3IP-205ENST00000417413 PIGSQ96S52 555 aa22.01■■□□□ 1.11
RAB3IP-205ENST00000417413 TRIM34Q9BYJ4 488 aa22.01■■□□□ 1.11
RAB3IP-205ENST00000417413 TMOD2Q9NZR1 351 aa22.01■■□□□ 1.11
RAB3IP-205ENST00000417413 NYAP2Q9P242 653 aa22.01■■□□□ 1.11
RAB3IP-205ENST00000417413 ZNF174Q15697 407 aa22■■□□□ 1.11
RAB3IP-205ENST00000417413 SIAH1Q8IUQ4 282 aa22■■□□□ 1.11
RAB3IP-205ENST00000417413 ZBED3Q96IU2 234 aaPredicted RBP22■■□□□ 1.11
RAB3IP-205ENST00000417413 ZMYND12Q9H0C1 365 aa22■■□□□ 1.11
RAB3IP-205ENST00000417413 KANSL2Q9H9L4 492 aa22■■□□□ 1.11
RAB3IP-205ENST00000417413 CBX8Q9HC52 389 aa22■■□□□ 1.11
RAB3IP-205ENST00000417413 PCDHA6Q9UN73 950 aa22■■□□□ 1.11
RAB3IP-205ENST00000417413 PCDHA8Q9Y5H6 950 aa22■■□□□ 1.11
RAB3IP-205ENST00000417413 CNTNAP1P78357 1384 aa21.99■■□□□ 1.11
RAB3IP-205ENST00000417413 CLRN2A0PK11 232 aa21.99■■□□□ 1.11
RAB3IP-205ENST00000417413 TCP10L2B9ZVM9 353 aa21.99■■□□□ 1.11
RAB3IP-205ENST00000417413 RPS12P25398 132 aaKnown RBP21.99■■□□□ 1.11
RAB3IP-205ENST00000417413 FAM151AQ8WW52 585 aa21.99■■□□□ 1.11
RAB3IP-205ENST00000417413 VAT1LQ9HCJ6 419 aa21.99■■□□□ 1.11
RAB3IP-205ENST00000417413 KIAA1468Q9P260 1216 aa21.99■■□□□ 1.11
RAB3IP-205ENST00000417413 KCNH3Q9ULD8 1083 aa21.99■■□□□ 1.11
RAB3IP-205ENST00000417413 CAVIN2O95810 425 aa21.98■■□□□ 1.11
RAB3IP-205ENST00000417413 EEF2P13639 858 aaKnown RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms