RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 TMX2Q9Y320 296 aa9.45□□□□□ -0.9
MDC1-203ENST00000417033 AFG3L2Q9Y4W6 797 aa9.45□□□□□ -0.9
MDC1-203ENST00000417033 TLL2Q9Y6L7 1015 aa9.45□□□□□ -0.9
MDC1-203ENST00000417033 FRMPD2Q68DX3 1309 aaPredicted RBP9.45□□□□□ -0.9
MDC1-203ENST00000417033 CCDC69A6NI79 296 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 TMEM88BA6NKF7 163 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 GOLGA8HP0CJ92 632 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 PDHBP11177 359 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 PDIA3P30101 505 aaKnown RBP9.44□□□□□ -0.9
MDC1-203ENST00000417033 CDC27P30260 824 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 HMGCS2P54868 508 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 CCT2P78371 535 aaKnown RBP9.44□□□□□ -0.9
MDC1-203ENST00000417033 TROAPQ12815 778 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 IER5LQ5T953 404 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 TTBK2Q6IQ55 1244 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 USP17L2Q6R6M4 530 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 ERO1BQ86YB8 467 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 STAG2Q8N3U4 1231 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 FBXL16Q8N461 479 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 ZNF280CQ8ND82 737 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 MKL1Q969V6 931 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 SLC10A4Q96EP9 437 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 ZIC5Q96T25 663 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 MTA3Q9BTC8 594 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 WDR18Q9BV38 432 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 TBC1D2Q9BYX2 928 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 ALDH8A1Q9H2A2 487 aaPredicted RBP9.44□□□□□ -0.9
MDC1-203ENST00000417033 VCPKMTQ9H867 229 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 ARHGEF10LQ9HCE6 1279 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 EMILIN3Q9NT22 766 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 FAM217BQ9NTX9 383 aaPredicted RBP9.44□□□□□ -0.9
MDC1-203ENST00000417033 GINM1Q9NU53 330 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 MYH4Q9Y623 1939 aa9.44□□□□□ -0.9
MDC1-203ENST00000417033 GOLGA8AA7E2F4 631 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 F5H6K3 240 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 ST18O60284 1047 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 DDAH1O94760 285 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 PLEKHA8P1O95397 391 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 SLC4A3P48751 1232 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 NT5C2P49902 561 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 EVCP57679 992 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 PPATQ06203 517 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 KLRC3Q07444 240 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 SCRN1Q12765 414 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 PPIL2Q13356 520 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 MOGSQ13724 837 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 GRM4Q14833 912 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 CCDC96Q2M329 555 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 CCDC178Q5BJE1 867 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 FAM83BQ5T0W9 1011 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 SPRYD7Q5W111 196 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 SLFN13Q68D06 897 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 KCTD1Q719H9 257 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 CATIPQ7Z7H3 387 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 NBPF11Q86T75 865 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 CCDC83Q8IWF9 413 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 CMTR1Q8N1G2 835 aaKnown RBP9.43□□□□□ -0.9
MDC1-203ENST00000417033 TMX3Q96JJ7 454 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 KIAA1683Q9H0B3 1180 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 GPCPD1Q9NPB8 672 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 KCNH4Q9UQ05 1017 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 SLC12A7Q9Y666 1083 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 PTPRFP10586 1907 aa9.43□□□□□ -0.9
MDC1-203ENST00000417033 CEP350Q5VT06 3117 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 FAM155AB1AL88 458 aaPredicted RBP9.42□□□□□ -0.9
MDC1-203ENST00000417033 USP17L10C9JJH3 530 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 ZBTB43O43298 467 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 SLC10A3P09131 477 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 SNHG28P0DPA3 235 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 TAL1P17542 331 aaPredicted RBP9.42□□□□□ -0.9
MDC1-203ENST00000417033 VCAM1P19320 739 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 ADD1P35611 737 aaKnown RBP9.42□□□□□ -0.9
MDC1-203ENST00000417033 SLC16A2P36021 539 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 APLP1P51693 650 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 ZNF157P51786 506 aaPredicted RBP9.42□□□□□ -0.9
MDC1-203ENST00000417033 BACE1P56817 501 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 ZNF543Q08ER8 600 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 GRM1Q13255 1194 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 TREML2Q5T2D2 321 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 CYP4F22Q6NT55 531 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 RGMBQ6NW40 437 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 GMCL1P1Q8NEA9 526 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 SNX21Q969T3 373 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 UBA5Q9GZZ9 404 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 AS3MTQ9HBK9 375 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 FBXO28Q9NVF7 368 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 MAD2L2Q9UI95 211 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 ISY1Q9ULR0 285 aaKnown RBP9.42□□□□□ -0.9
MDC1-203ENST00000417033 LIMCH1Q9UPQ0 1083 aa9.42□□□□□ -0.9
MDC1-203ENST00000417033 NID2Q14112 1375 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 A0A0G2JLL6 359 aaPredicted RBP9.41□□□□□ -0.9
MDC1-203ENST00000417033 hCG_1642624A0A1W2PR95 340 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 K7ELQ4 463 aaPredicted RBP9.41□□□□□ -0.9
MDC1-203ENST00000417033 JAK2O60674 1132 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 PFKFB2O60825 505 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 CTDNEP1O95476 244 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 SLC1A4P43007 532 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 METAP2P50579 478 aaKnown RBP eCLIP9.41□□□□□ -0.9
MDC1-203ENST00000417033 SNAP25P60880 206 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 FUT2Q10981 343 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms