RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 SERPINB13Q9UIV8 391 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 PPP2R3BQ9Y5P8 575 aa9.43□□□□□ -0.9
AP001042.1-201ENST00000416842 COL6A3P12111 3177 aa9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 MGAMO43451 1857 aa9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 CDK5RAP2Q96SN8 1893 aa9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 FOCADQ5VW36 1801 aa9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 USP2O75604 605 aaPredicted RBP9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 DDAH1O94760 285 aa9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 PDCP20941 246 aa9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 MCM4P33991 863 aa9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 IREB2P48200 963 aaKnown RBP9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 MNX1P50219 401 aaPredicted RBP9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 CCT2P78371 535 aaKnown RBP9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 STK3Q13188 491 aa9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 ARHGEF6Q15052 776 aa9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 TAF1CQ15572 869 aaPredicted RBP9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 RRP12Q5JTH9 1297 aaKnown RBP9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 NBPF12Q5TAG4 269 aaPredicted RBP9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 ZNF654Q8IZM8 581 aa9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 ZNF444Q8N0Y2 327 aaPredicted RBP9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 BRI3BPQ8WY22 251 aa9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 MKL1Q969V6 931 aa9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 CCDC17Q96LX7 622 aa9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 ZKSCAN3Q9BRR0 538 aa9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 UBAC1Q9BSL1 405 aa9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 ARHGAP39Q9C0H5 1083 aa9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 MKNK2Q9HBH9 465 aa9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 SLC12A7Q9Y666 1083 aa9.42□□□□□ -0.9
AP001042.1-201ENST00000416842 ERICH2A1L162 156 aa9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 PTPDC1A2A3K4 754 aa9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 NMT2O60551 498 aa9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 CALM1P0DP23 149 aa9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 CALM2P0DP24 149 aa9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 CALM3P0DP25 149 aa9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 ZSCAN22P10073 491 aaPredicted RBP9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 METAP2P50579 478 aaKnown RBP eCLIP9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 RBM5P52756 815 aaKnown RBP eCLIP9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 MTFR1Q15390 333 aa9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 SUPT20HL1Q3ZLR7 823 aa9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 LARP1BQ659C4 914 aaKnown RBP9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 UBE2Q1Q7Z7E8 422 aa9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 SIAH1Q8IUQ4 282 aa9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 ANKRD13AQ8IZ07 590 aa9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 STK11IPQ8N1F8 1099 aa9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 CRACR2BQ8N4Y2 399 aaPredicted RBP9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 OPTNQ96CV9 577 aa9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 LRCH3Q96II8 777 aa9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 ELP3Q9H9T3 547 aa9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 ZFYVE28Q9HCC9 887 aa9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 MTMR4Q9NYA4 1195 aa9.41□□□□□ -0.9
AP001042.1-201ENST00000416842 STK36Q9NRP7 1315 aa9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 CCDC196A0A1B0GTZ2 297 aa9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 CLRN2A0PK11 232 aa9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 CCDC69A6NI79 296 aa9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 TSPY2A6NKD2 308 aa9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 GOLGA8BA8MQT2 603 aa9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 BAG4O95429 457 aaKnown RBP9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 FMNL1O95466 1100 aaPredicted RBP9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 HLA-DOAP06340 250 aa9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 SNHG28P0DPA3 235 aa9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 SMARCA1P28370 1054 aa9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 GUCY1A2P33402 732 aa9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 CACNB3P54284 484 aa9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 PICALMQ13492 652 aa9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 IFIT1BQ5T764 474 aaKnown RBP9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 FAM43AQ8N2R8 423 aa9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 TEPSINQ96N21 525 aa9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 TMEM47Q9BQJ4 181 aa9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 TOMM22Q9NS69 142 aa9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 HERC5Q9UII4 1024 aaKnown RBP9.4□□□□□ -0.9
AP001042.1-201ENST00000416842 CCL15-CCL14A0A0B4J2E2 113 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 A0A1W2PPC1 479 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 PALM3A6NDB9 673 aaPredicted RBP9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 GOLGA8AA7E2F4 631 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 PRPF3O43395 683 aaKnown RBP9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 DTNBO60941 627 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 F13A1P00488 732 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 TSPY3P0CV98 308 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 TSPY8P0CW00 308 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 TOP1P11387 765 aaKnown RBP9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 AKR1B1P15121 316 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 LACTBP83111 547 aaPredicted RBP9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 RRP1BQ14684 758 aaKnown RBP9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 CCL15Q16663 113 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 RTN1Q16799 776 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 SLC35G1Q2M3R5 365 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 SYNE3Q6ZMZ3 975 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 NFXL1Q6ZNB6 911 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 CATIPQ7Z7H3 387 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 FBXO18Q8NFZ0 1043 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 CEP95Q96GE4 821 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 MYL10Q9BUA6 226 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 HTATIP2Q9BUP3 242 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 VEZTQ9HBM0 779 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 RBM28Q9NW13 759 aaKnown RBP9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 NYAP2Q9P242 653 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 ORC3Q9UBD5 711 aaPredicted RBP9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 MYH1P12882 1939 aa9.39□□□□□ -0.91
AP001042.1-201ENST00000416842 NAV1Q8NEY1 1877 aa9.38□□□□□ -0.91
AP001042.1-201ENST00000416842 PHF20L1A8MW92 1017 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms