RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 PIK3C2BO00750 1634 aa17.4■□□□□ 0.38
PHRF1-203ENST00000416188 PSTPIP2Q9H939 334 aa17.4■□□□□ 0.38
PHRF1-203ENST00000416188 PNMA3Q9UL41 463 aa17.4■□□□□ 0.38
PHRF1-203ENST00000416188 OPA1O60313 960 aa17.4■□□□□ 0.38
PHRF1-203ENST00000416188 FNBP1Q96RU3 617 aa17.4■□□□□ 0.38
PHRF1-203ENST00000416188 NOC4LQ9BVI4 516 aaKnown RBP17.4■□□□□ 0.38
PHRF1-203ENST00000416188 RSPH14Q9UHP6 348 aa17.4■□□□□ 0.38
PHRF1-203ENST00000416188 ATP6V0A2Q9Y487 856 aa17.4■□□□□ 0.38
PHRF1-203ENST00000416188 A0A0D9SFI3 127 aa17.39■□□□□ 0.38
PHRF1-203ENST00000416188 HSPD1P10809 573 aaKnown RBP17.39■□□□□ 0.38
PHRF1-203ENST00000416188 CRKP46108 304 aa17.39■□□□□ 0.37
PHRF1-203ENST00000416188 CACNB3P54284 484 aa17.39■□□□□ 0.37
PHRF1-203ENST00000416188 IGSF22Q8N9C0 903 aa17.39■□□□□ 0.37
PHRF1-203ENST00000416188 AP5M1Q9H0R1 490 aa17.39■□□□□ 0.37
PHRF1-203ENST00000416188 GAS7O60861 476 aa17.39■□□□□ 0.37
PHRF1-203ENST00000416188 PI16Q6UXB8 463 aa17.39■□□□□ 0.37
PHRF1-203ENST00000416188 METTL13Q8N6R0 699 aa17.39■□□□□ 0.37
PHRF1-203ENST00000416188 LINC00116Q8NCU8 138 aa17.39■□□□□ 0.37
PHRF1-203ENST00000416188 SP8Q8IXZ3 490 aa17.39■□□□□ 0.37
PHRF1-203ENST00000416188 FBF1Q8TES7 1133 aa17.39■□□□□ 0.37
PHRF1-203ENST00000416188 CD209Q9NNX6 404 aa17.39■□□□□ 0.37
PHRF1-203ENST00000416188 TECPR2O15040 1411 aa17.39■□□□□ 0.37
PHRF1-203ENST00000416188 PTPN12Q05209 780 aaKnown RBP17.38■□□□□ 0.37
PHRF1-203ENST00000416188 BIRC3Q13489 604 aa17.38■□□□□ 0.37
PHRF1-203ENST00000416188 TLDC2A0PJX2 215 aa17.38■□□□□ 0.37
PHRF1-203ENST00000416188 FGAP02671 866 aa17.38■□□□□ 0.37
PHRF1-203ENST00000416188 CDAN1Q8IWY9 1227 aa17.38■□□□□ 0.37
PHRF1-203ENST00000416188 LEO1Q8WVC0 666 aaPredicted RBP17.38■□□□□ 0.37
PHRF1-203ENST00000416188 TDRD3Q9H7E2 651 aaKnown RBP17.38■□□□□ 0.37
PHRF1-203ENST00000416188 TLR7Q9NYK1 1049 aaKnown RBP17.38■□□□□ 0.37
PHRF1-203ENST00000416188 STK24Q9Y6E0 443 aa17.38■□□□□ 0.37
PHRF1-203ENST00000416188 ATP2A1O14983 1001 aa17.38■□□□□ 0.37
PHRF1-203ENST00000416188 JAK2O60674 1132 aa17.38■□□□□ 0.37
PHRF1-203ENST00000416188 LRWD1Q9UFC0 647 aa17.38■□□□□ 0.37
PHRF1-203ENST00000416188 NCOA3Q9Y6Q9 1424 aa17.38■□□□□ 0.37
PHRF1-203ENST00000416188 SMIM23A6NLE4 172 aa17.38■□□□□ 0.37
PHRF1-203ENST00000416188 TTC38Q5R3I4 469 aa17.38■□□□□ 0.37
PHRF1-203ENST00000416188 APOBEC3FQ8IUX4 373 aaKnown RBP17.38■□□□□ 0.37
PHRF1-203ENST00000416188 RNF169Q8NCN4 708 aa17.38■□□□□ 0.37
PHRF1-203ENST00000416188 IQSEC2Q5JU85 1478 aa17.37■□□□□ 0.37
PHRF1-203ENST00000416188 TTLL1O95922 423 aa17.37■□□□□ 0.37
PHRF1-203ENST00000416188 MECOMQ03112 1051 aa17.37■□□□□ 0.37
PHRF1-203ENST00000416188 HACE1Q8IYU2 909 aa17.37■□□□□ 0.37
PHRF1-203ENST00000416188 CLSTN2Q9H4D0 955 aa17.37■□□□□ 0.37
PHRF1-203ENST00000416188 FOXP4Q8IVH2 680 aaPredicted RBP17.37■□□□□ 0.37
PHRF1-203ENST00000416188 SNX29Q8TEQ0 813 aa17.37■□□□□ 0.37
PHRF1-203ENST00000416188 SERPINA10Q9UK55 444 aa17.37■□□□□ 0.37
PHRF1-203ENST00000416188 VAV2P52735 878 aa17.37■□□□□ 0.37
PHRF1-203ENST00000416188 CALCRLQ16602 461 aa17.37■□□□□ 0.37
PHRF1-203ENST00000416188 DNAJC21Q5F1R6 531 aaKnown RBP17.37■□□□□ 0.37
PHRF1-203ENST00000416188 MIER3Q7Z3K6 550 aa17.37■□□□□ 0.37
PHRF1-203ENST00000416188 VPS54Q9P1Q0 977 aa17.37■□□□□ 0.37
PHRF1-203ENST00000416188 CROCC2H7BZ55 1655 aa17.37■□□□□ 0.37
PHRF1-203ENST00000416188 RASGRF1Q13972 1273 aa17.37■□□□□ 0.37
PHRF1-203ENST00000416188 KRT40Q6A162 431 aa17.37■□□□□ 0.37
PHRF1-203ENST00000416188 WRNIP1Q96S55 665 aa17.37■□□□□ 0.37
PHRF1-203ENST00000416188 E9PCH4 1651 aa17.37■□□□□ 0.37
PHRF1-203ENST00000416188 UTP14CQ5TAP6 766 aaKnown RBP17.36■□□□□ 0.37
PHRF1-203ENST00000416188 CDC37L1Q7L3B6 337 aa17.36■□□□□ 0.37
PHRF1-203ENST00000416188 PCP11498 1178 aaKnown RBP17.36■□□□□ 0.37
PHRF1-203ENST00000416188 CAPN2P17655 700 aa17.36■□□□□ 0.37
PHRF1-203ENST00000416188 GPSM2P81274 684 aa17.36■□□□□ 0.37
PHRF1-203ENST00000416188 CCDC25Q86WR0 208 aa17.36■□□□□ 0.37
PHRF1-203ENST00000416188 FRMD4BQ9Y2L6 1034 aa17.36■□□□□ 0.37
PHRF1-203ENST00000416188 GADD45BO75293 160 aaPredicted RBP17.36■□□□□ 0.37
PHRF1-203ENST00000416188 PRR5LQ6MZQ0 368 aa17.36■□□□□ 0.37
PHRF1-203ENST00000416188 PCDHA1Q9Y5I3 950 aa17.36■□□□□ 0.37
PHRF1-203ENST00000416188 CUTAO60888 179 aa17.36■□□□□ 0.37
PHRF1-203ENST00000416188 ZNF202O95125 648 aa17.36■□□□□ 0.37
PHRF1-203ENST00000416188 C6orf163Q5TEZ5 329 aa17.36■□□□□ 0.37
PHRF1-203ENST00000416188 CSGALNACT2Q8N6G5 542 aa17.36■□□□□ 0.37
PHRF1-203ENST00000416188 ADD3Q9UEY8 706 aaKnown RBP17.36■□□□□ 0.37
PHRF1-203ENST00000416188 EXOC7Q9UPT5 735 aa17.36■□□□□ 0.37
PHRF1-203ENST00000416188 DNM3Q9UQ16 869 aa17.36■□□□□ 0.37
PHRF1-203ENST00000416188 CEP83Q9Y592 693 aa17.36■□□□□ 0.37
PHRF1-203ENST00000416188 FERP16591 822 aa17.35■□□□□ 0.37
PHRF1-203ENST00000416188 HSPA4P34932 840 aa17.35■□□□□ 0.37
PHRF1-203ENST00000416188 ANTXR1Q9H6X2 564 aa17.35■□□□□ 0.37
PHRF1-203ENST00000416188 KCNJ14Q9UNX9 436 aa17.35■□□□□ 0.37
PHRF1-203ENST00000416188 PLEKHG2Q9H7P9 1386 aa17.35■□□□□ 0.37
PHRF1-203ENST00000416188 GPATCH4Q5T3I0 446 aaKnown RBP17.35■□□□□ 0.37
PHRF1-203ENST00000416188 MCTP2Q6DN12 878 aa17.35■□□□□ 0.37
PHRF1-203ENST00000416188 SELENOSQ9BQE4 189 aa17.35■□□□□ 0.37
PHRF1-203ENST00000416188 ZNRF3Q9ULT6 936 aa17.35■□□□□ 0.37
PHRF1-203ENST00000416188 MADDQ8WXG6 1647 aa17.35■□□□□ 0.37
PHRF1-203ENST00000416188 FANCCQ00597 558 aa17.35■□□□□ 0.37
PHRF1-203ENST00000416188 OTUD6AQ7L8S5 288 aa17.35■□□□□ 0.37
PHRF1-203ENST00000416188 ZNF341Q9BYN7 854 aa17.35■□□□□ 0.37
PHRF1-203ENST00000416188 ASNSP08243 561 aa17.35■□□□□ 0.37
PHRF1-203ENST00000416188 CEP63Q96MT8 703 aa17.35■□□□□ 0.37
PHRF1-203ENST00000416188 AMNQ9BXJ7 453 aa17.35■□□□□ 0.37
PHRF1-203ENST00000416188 NSRP1Q9H0G5 558 aaKnown RBP17.35■□□□□ 0.37
PHRF1-203ENST00000416188 EPB41P11171 864 aaKnown RBP17.34■□□□□ 0.37
PHRF1-203ENST00000416188 DPEP1P16444 411 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 CCDC117Q8IWD4 279 aaPredicted RBP17.34■□□□□ 0.37
PHRF1-203ENST00000416188 CMTR1Q8N1G2 835 aaKnown RBP17.34■□□□□ 0.37
PHRF1-203ENST00000416188 IPO4Q8TEX9 1081 aaKnown RBP17.34■□□□□ 0.37
PHRF1-203ENST00000416188 CBX8Q9HC52 389 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 POLA2Q14181 598 aa17.34■□□□□ 0.37
PHRF1-203ENST00000416188 VPS18Q9P253 973 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms