RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 MOB2Q70IA6 237 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 ERO1BQ86YB8 467 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 CCDC82Q8N4S0 544 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 RBM46Q8TBY0 533 aaKnown RBP9.75□□□□□ -0.85
RBM39-208ENST00000416108 ACER1Q8TDN7 264 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 WDR18Q9BV38 432 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 SLC26A6Q9BXS9 759 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 RNF26Q9BY78 433 aaPredicted RBP9.75□□□□□ -0.85
RBM39-208ENST00000416108 KIAA1683Q9H0B3 1180 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 GPCPD1Q9NPB8 672 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 ORC3Q9UBD5 711 aaPredicted RBP9.75□□□□□ -0.85
RBM39-208ENST00000416108 SEC63Q9UGP8 760 aaKnown RBP9.75□□□□□ -0.85
RBM39-208ENST00000416108 ZHX2Q9Y6X8 837 aa9.75□□□□□ -0.85
RBM39-208ENST00000416108 TCHHQ07283 1943 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 RBBP6Q7Z6E9 1792 aaKnown RBP9.74□□□□□ -0.85
RBM39-208ENST00000416108 A0A1W2PRG0 241 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 PALM3A6NDB9 673 aaPredicted RBP9.74□□□□□ -0.85
RBM39-208ENST00000416108 SPDYE5A6NIY4 337 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 TRIM75PA6NK02 468 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 H3BQV1 296 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 KIF3CO14782 793 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 WDR46O15213 610 aaKnown RBP9.74□□□□□ -0.85
RBM39-208ENST00000416108 JAK2O60674 1132 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 PLEKHA8P1O95397 391 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 DEXIO95424 95 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 FMNL1O95466 1100 aaPredicted RBP9.74□□□□□ -0.85
RBM39-208ENST00000416108 GOLGA8HP0CJ92 632 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 SNHG28P0DPA3 235 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 XBP1P17861 261 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 SMARCA1P28370 1054 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 PPATQ06203 517 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 MTMR2Q13614 643 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 TRIM29Q14134 588 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 IFFO2Q5TF58 517 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 KCTD1Q719H9 257 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 SPICE1Q8N0Z3 855 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 SMARCC2Q8TAQ2 1214 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 LPAR1Q92633 364 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 SLC10A4Q96EP9 437 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 RRP36Q96EU6 259 aaKnown RBP9.74□□□□□ -0.85
RBM39-208ENST00000416108 OTUD5Q96G74 571 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 GMCL1Q96IK5 515 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 MAD2L2Q9UI95 211 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 CIZ1Q9ULV3 898 aaPredicted RBP9.74□□□□□ -0.85
RBM39-208ENST00000416108 CNTNAP5Q8WYK1 1306 aa9.74□□□□□ -0.85
RBM39-208ENST00000416108 PRPF3O43395 683 aaKnown RBP9.73□□□□□ -0.85
RBM39-208ENST00000416108 TOMM70O94826 608 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 CTDNEP1O95476 244 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 ITGBL1O95965 494 aaPredicted RBP9.73□□□□□ -0.85
RBM39-208ENST00000416108 STAT2P52630 851 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 FOSBP53539 338 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 BACE1P56817 501 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 NUCB2P80303 420 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 FMR1Q06787 632 aaKnown RBP eCLIP9.73□□□□□ -0.85
RBM39-208ENST00000416108 PPIL2Q13356 520 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 LARP1BQ659C4 914 aaKnown RBP9.73□□□□□ -0.85
RBM39-208ENST00000416108 FAM160B2Q86V87 743 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 SIAH1Q8IUQ4 282 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 CMTR1Q8N1G2 835 aaKnown RBP9.73□□□□□ -0.85
RBM39-208ENST00000416108 STAG2Q8N3U4 1231 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 CHURC1Q8WUH1 139 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 PHKBQ93100 1093 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 OPTNQ96CV9 577 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 CLMNQ96JQ2 1002 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 SPZ1Q9BXG8 430 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 TANGO6Q9C0B7 1094 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 VAT1LQ9HCJ6 419 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 FAM217BQ9NTX9 383 aaPredicted RBP9.73□□□□□ -0.85
RBM39-208ENST00000416108 CHMP5Q9NZZ3 219 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 FEM1BQ9UK73 627 aa9.73□□□□□ -0.85
RBM39-208ENST00000416108 CTDP1Q9Y5B0 961 aaPredicted RBP9.73□□□□□ -0.85
RBM39-208ENST00000416108 VPS37CA5D8V6 355 aaPredicted RBP9.72□□□□□ -0.85
RBM39-208ENST00000416108 TMEM232C9JQI7 657 aa9.72□□□□□ -0.85
RBM39-208ENST00000416108 PPFIA3O75145 1194 aa9.72□□□□□ -0.85
RBM39-208ENST00000416108 HMGCS2P54868 508 aa9.72□□□□□ -0.85
RBM39-208ENST00000416108 HUNKP57058 714 aa9.72□□□□□ -0.85
RBM39-208ENST00000416108 NTRK3Q16288 839 aa9.72□□□□□ -0.85
RBM39-208ENST00000416108 FAM83BQ5T0W9 1011 aa9.72□□□□□ -0.85
RBM39-208ENST00000416108 LDLRAD1Q5T700 205 aa9.72□□□□□ -0.85
RBM39-208ENST00000416108 SYDE2Q5VT97 1194 aa9.72□□□□□ -0.85
RBM39-208ENST00000416108 SAMD1Q6SPF0 538 aaPredicted RBP9.72□□□□□ -0.85
RBM39-208ENST00000416108 GADL1Q6ZQY3 521 aa9.72□□□□□ -0.85
RBM39-208ENST00000416108 RASGRP2Q7LDG7 609 aa9.72□□□□□ -0.85
RBM39-208ENST00000416108 HOMER1Q86YM7 354 aa9.72□□□□□ -0.85
RBM39-208ENST00000416108 SRBD1Q8N5C6 995 aaKnown RBP9.72□□□□□ -0.85
RBM39-208ENST00000416108 PIBF1Q8WXW3 757 aa9.72□□□□□ -0.85
RBM39-208ENST00000416108 C8orf76Q96K31 380 aa9.72□□□□□ -0.85
RBM39-208ENST00000416108 C12orf42Q96LP6 360 aa9.72□□□□□ -0.85
RBM39-208ENST00000416108 NUP88Q99567 741 aaPredicted RBP9.72□□□□□ -0.85
RBM39-208ENST00000416108 ALG1Q9BT22 464 aa9.72□□□□□ -0.85
RBM39-208ENST00000416108 UBA5Q9GZZ9 404 aa9.72□□□□□ -0.85
RBM39-208ENST00000416108 AFG3L2Q9Y4W6 797 aa9.72□□□□□ -0.85
RBM39-208ENST00000416108 hCG_1984214I3L0E3 225 aa9.71□□□□□ -0.86
RBM39-208ENST00000416108 CXCL11O14625 94 aa9.71□□□□□ -0.86
RBM39-208ENST00000416108 SCG2P13521 617 aa9.71□□□□□ -0.86
RBM39-208ENST00000416108 VCAM1P19320 739 aa9.71□□□□□ -0.86
RBM39-208ENST00000416108 SLC16A2P36021 539 aa9.71□□□□□ -0.86
RBM39-208ENST00000416108 FSTL1Q12841 308 aa9.71□□□□□ -0.86
RBM39-208ENST00000416108 TRAF1Q13077 416 aa9.71□□□□□ -0.86
RBM39-208ENST00000416108 PABPC4Q13310 644 aaKnown RBP eCLIP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms