RNA–Protein interactions for RNA: ENST00000415944.3

MECP2-204, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-204ENST00000415944 COL9A3Q14050 684 aaPredicted RBP9.9□□□□□ -0.82
MECP2-204ENST00000415944 PTPAQ15257 358 aa9.9□□□□□ -0.82
MECP2-204ENST00000415944 DLGAP5Q15398 846 aa9.9□□□□□ -0.82
MECP2-204ENST00000415944 CAMK4Q16566 473 aa9.9□□□□□ -0.82
MECP2-204ENST00000415944 RRP12Q5JTH9 1297 aaKnown RBP9.9□□□□□ -0.82
MECP2-204ENST00000415944 APOBEC3HQ6NTF7 200 aaKnown RBP9.9□□□□□ -0.82
MECP2-204ENST00000415944 LDHDQ86WU2 507 aa9.9□□□□□ -0.82
MECP2-204ENST00000415944 CKAP2LQ8IYA6 745 aa9.9□□□□□ -0.82
MECP2-204ENST00000415944 CCDC150Q8NCX0 1101 aa9.9□□□□□ -0.82
MECP2-204ENST00000415944 ZC3H15Q8WU90 426 aaKnown RBP9.9□□□□□ -0.82
MECP2-204ENST00000415944 AATFQ9NY61 560 aaKnown RBP eCLIP9.9□□□□□ -0.82
MECP2-204ENST00000415944 PGAP2Q9UHJ9 254 aa9.9□□□□□ -0.82
MECP2-204ENST00000415944 DDX60LQ5H9U9 1706 aaKnown RBP9.9□□□□□ -0.83
MECP2-204ENST00000415944 PITPNM2Q9BZ72 1349 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 GPR75-ASB3A0A0A6YYF3 556 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 TSPY2A6NKD2 308 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 USP17L12C9JPN9 530 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 USP17L21D6R901 530 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 DYNC1I1O14576 645 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 RANBP6O60518 1105 aaKnown RBP9.89□□□□□ -0.83
MECP2-204ENST00000415944 PFKFB1P16118 471 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 PPP1R2P41236 205 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 TROAPQ12815 778 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 NOLC1Q14978 699 aaKnown RBP eCLIP9.89□□□□□ -0.83
MECP2-204ENST00000415944 NBPF9Q3BBW0 867 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 SPDYE2Q495Y8 402 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 NT5DC1Q5TFE4 455 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 C12orf60Q5U649 245 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 TMTC3Q6ZXV5 915 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 ADGRA1Q86SQ6 560 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 NBPF11Q86T75 865 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 DRC7Q8IY82 874 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 ZNF444Q8N0Y2 327 aaPredicted RBP9.89□□□□□ -0.83
MECP2-204ENST00000415944 ENAHQ8N8S7 591 aaPredicted RBP9.89□□□□□ -0.83
MECP2-204ENST00000415944 MIGA1Q8NAN2 632 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 CCDC112Q8NEF3 446 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 PRMT6Q96LA8 375 aaPredicted RBP9.89□□□□□ -0.83
MECP2-204ENST00000415944 PHF20Q9BVI0 1012 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 GLT8D2Q9H1C3 349 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 KAT14Q9H8E8 782 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 MAGEF1Q9HAY2 307 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 RTN4Q9NQC3 1192 aaKnown RBP9.89□□□□□ -0.83
MECP2-204ENST00000415944 KCNH3Q9ULD8 1083 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 CLIC4Q9Y696 253 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.89□□□□□ -0.83
MECP2-204ENST00000415944 NAV1Q8NEY1 1877 aa9.89□□□□□ -0.83
MECP2-204ENST00000415944 ASTN2O75129 1339 aaPredicted RBP9.88□□□□□ -0.83
MECP2-204ENST00000415944 MYH1P12882 1939 aa9.88□□□□□ -0.83
MECP2-204ENST00000415944 POTEIP0CG38 1075 aa9.88□□□□□ -0.83
MECP2-204ENST00000415944 POTEJP0CG39 1038 aa9.88□□□□□ -0.83
MECP2-204ENST00000415944 ERCC5P28715 1186 aaPredicted RBP9.88□□□□□ -0.83
MECP2-204ENST00000415944 TXLNAP40222 546 aa9.88□□□□□ -0.83
MECP2-204ENST00000415944 BTDP43251 543 aa9.88□□□□□ -0.83
MECP2-204ENST00000415944 USP5P45974 858 aa9.88□□□□□ -0.83
MECP2-204ENST00000415944 NDUFA8P51970 172 aa9.88□□□□□ -0.83
MECP2-204ENST00000415944 RBM5P52756 815 aaKnown RBP eCLIP9.88□□□□□ -0.83
MECP2-204ENST00000415944 RHBDL3P58872 404 aa9.88□□□□□ -0.83
MECP2-204ENST00000415944 PLCB2Q00722 1185 aa9.88□□□□□ -0.83
MECP2-204ENST00000415944 GUCY1B3Q02153 619 aa9.88□□□□□ -0.83
MECP2-204ENST00000415944 CEBPZQ03701 1054 aaKnown RBP9.88□□□□□ -0.83
MECP2-204ENST00000415944 EAPPQ56P03 285 aaPredicted RBP9.88□□□□□ -0.83
MECP2-204ENST00000415944 RBM26Q5T8P6 1007 aaKnown RBP9.88□□□□□ -0.83
MECP2-204ENST00000415944 MCTP2Q6DN12 878 aa9.88□□□□□ -0.83
MECP2-204ENST00000415944 DAGLBQ8NCG7 672 aa9.88□□□□□ -0.83
MECP2-204ENST00000415944 CNNM3Q8NE01 707 aa9.88□□□□□ -0.83
MECP2-204ENST00000415944 KIAA1524Q8TCG1 905 aa9.88□□□□□ -0.83
MECP2-204ENST00000415944 NAP1L5Q96NT1 182 aaPredicted RBP9.88□□□□□ -0.83
MECP2-204ENST00000415944 OSBPL5Q9H0X9 879 aaPredicted RBP9.88□□□□□ -0.83
MECP2-204ENST00000415944 DNAJC25Q9H1X3 360 aa9.88□□□□□ -0.83
MECP2-204ENST00000415944 GGA3Q9NZ52 723 aa9.88□□□□□ -0.83
MECP2-204ENST00000415944 CLIP2Q9UDT6 1046 aa9.88□□□□□ -0.83
MECP2-204ENST00000415944 A0A1B0GVL5 298 aa9.87□□□□□ -0.83
MECP2-204ENST00000415944 PRKAB2O43741 272 aa9.87□□□□□ -0.83
MECP2-204ENST00000415944 SCG2P13521 617 aa9.87□□□□□ -0.83
MECP2-204ENST00000415944 MYL5Q02045 173 aa9.87□□□□□ -0.83
MECP2-204ENST00000415944 PFKFB3Q16875 520 aaPredicted RBP9.87□□□□□ -0.83
MECP2-204ENST00000415944 FKBP1CQ5VVH2 108 aa9.87□□□□□ -0.83
MECP2-204ENST00000415944 CDC42EP5Q6NZY7 148 aa9.87□□□□□ -0.83
MECP2-204ENST00000415944 KRBA2Q6ZNG9 492 aa9.87□□□□□ -0.83
MECP2-204ENST00000415944 LUZP1Q86V48 1076 aa9.87□□□□□ -0.83
MECP2-204ENST00000415944 APOBEC3FQ8IUX4 373 aaKnown RBP9.87□□□□□ -0.83
MECP2-204ENST00000415944 RBM46Q8TBY0 533 aaKnown RBP9.87□□□□□ -0.83
MECP2-204ENST00000415944 NUP133Q8WUM0 1156 aa9.87□□□□□ -0.83
MECP2-204ENST00000415944 GSDMAQ96QA5 445 aa9.87□□□□□ -0.83
MECP2-204ENST00000415944 CTAGE1Q96RT6 745 aa9.87□□□□□ -0.83
MECP2-204ENST00000415944 CUEDC2Q9H467 287 aa9.87□□□□□ -0.83
MECP2-204ENST00000415944 GOLPH3LQ9H4A5 285 aa9.87□□□□□ -0.83
MECP2-204ENST00000415944 TDRD3Q9H7E2 651 aaKnown RBP9.87□□□□□ -0.83
MECP2-204ENST00000415944 MKNK2Q9HBH9 465 aa9.87□□□□□ -0.83
MECP2-204ENST00000415944 GPHNQ9NQX3 736 aaPredicted RBP9.87□□□□□ -0.83
MECP2-204ENST00000415944 ZNF70Q9UC06 446 aaPredicted RBP9.87□□□□□ -0.83
MECP2-204ENST00000415944 SWAP70Q9UH65 585 aa9.87□□□□□ -0.83
MECP2-204ENST00000415944 MKRN1Q9UHC7 482 aaKnown RBP9.87□□□□□ -0.83
MECP2-204ENST00000415944 PAXBP1Q9Y5B6 917 aa9.87□□□□□ -0.83
MECP2-204ENST00000415944 BAZ2AQ9UIF9 1905 aaKnown RBP9.87□□□□□ -0.83
MECP2-204ENST00000415944 SIPA1L1O43166 1804 aa9.86□□□□□ -0.83
MECP2-204ENST00000415944 COL2A1P02458 1487 aaPredicted RBP9.86□□□□□ -0.83
MECP2-204ENST00000415944 LAMB1P07942 1786 aa9.86□□□□□ -0.83
MECP2-204ENST00000415944 KIF28PB7ZC32 967 aa9.86□□□□□ -0.83
MECP2-204ENST00000415944 SLC26A4O43511 780 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms