RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 SETDB2Q96T68 719 aa4.48□□□□□ -1.69
LINC00428-201ENST00000415620 GPR62Q9BZJ7 368 aa4.48□□□□□ -1.69
LINC00428-201ENST00000415620 TJP2Q9UDY2 1190 aa4.48□□□□□ -1.69
LINC00428-201ENST00000415620 GNEQ9Y223 722 aaKnown RBP4.48□□□□□ -1.69
LINC00428-201ENST00000415620 PTPRTO14522 1441 aa4.47□□□□□ -1.69
LINC00428-201ENST00000415620 OR14I1A6ND48 311 aa4.47□□□□□ -1.69
LINC00428-201ENST00000415620 SP8Q8IXZ3 490 aa4.47□□□□□ -1.69
LINC00428-201ENST00000415620 ZDHHC14Q8IZN3 488 aa4.47□□□□□ -1.69
LINC00428-201ENST00000415620 FEZF2Q8TBJ5 459 aa4.47□□□□□ -1.69
LINC00428-201ENST00000415620 PANK1Q8TE04 598 aa4.47□□□□□ -1.69
LINC00428-201ENST00000415620 PPP1R13LQ8WUF5 828 aa4.47□□□□□ -1.69
LINC00428-201ENST00000415620 C12orf49Q9H741 205 aa4.47□□□□□ -1.69
LINC00428-201ENST00000415620 FAM8A1Q9UBU6 413 aa4.47□□□□□ -1.69
LINC00428-201ENST00000415620 ADAMTS12P58397 1594 aa4.47□□□□□ -1.69
LINC00428-201ENST00000415620 ASXL2Q76L83 1435 aa4.46□□□□□ -1.69
LINC00428-201ENST00000415620 YEATS2Q9ULM3 1422 aa4.46□□□□□ -1.69
LINC00428-201ENST00000415620 ABCA5Q8WWZ7 1642 aa4.46□□□□□ -1.69
LINC00428-201ENST00000415620 LTKP29376 864 aa4.46□□□□□ -1.7
LINC00428-201ENST00000415620 RPS26P62854 115 aaKnown RBP4.46□□□□□ -1.7
LINC00428-201ENST00000415620 DUSP4Q13115 394 aa4.46□□□□□ -1.7
LINC00428-201ENST00000415620 SLC6A19Q695T7 634 aa4.46□□□□□ -1.7
LINC00428-201ENST00000415620 ALG1LQ6GMV1 187 aa4.46□□□□□ -1.7
LINC00428-201ENST00000415620 TTBK2Q6IQ55 1244 aa4.46□□□□□ -1.7
LINC00428-201ENST00000415620 TSPYL5Q86VY4 417 aaPredicted RBP4.46□□□□□ -1.7
LINC00428-201ENST00000415620 ANKS4BQ8N8V4 417 aa4.46□□□□□ -1.7
LINC00428-201ENST00000415620 TEPSINQ96N21 525 aa4.46□□□□□ -1.7
LINC00428-201ENST00000415620 SIRT5Q9NXA8 310 aa4.46□□□□□ -1.7
LINC00428-201ENST00000415620 KCNH3Q9ULD8 1083 aa4.46□□□□□ -1.7
LINC00428-201ENST00000415620 ABCC2Q92887 1545 aa4.46□□□□□ -1.7
LINC00428-201ENST00000415620 KIAA0586Q9BVV6 1533 aa4.46□□□□□ -1.7
LINC00428-201ENST00000415620 FGD5Q6ZNL6 1462 aa4.45□□□□□ -1.7
LINC00428-201ENST00000415620 ZC3H12DA2A288 527 aaKnown RBP4.45□□□□□ -1.7
LINC00428-201ENST00000415620 SLC22A31A6NKX4 558 aa4.45□□□□□ -1.7
LINC00428-201ENST00000415620 HRKO00198 91 aa4.45□□□□□ -1.7
LINC00428-201ENST00000415620 USP17L7P0C7H9 530 aa4.45□□□□□ -1.7
LINC00428-201ENST00000415620 SRSF3P84103 164 aaKnown RBP4.45□□□□□ -1.7
LINC00428-201ENST00000415620 PLP2Q04941 152 aa4.45□□□□□ -1.7
LINC00428-201ENST00000415620 MCATQ8IVS2 390 aaKnown RBP4.45□□□□□ -1.7
LINC00428-201ENST00000415620 SHISA4Q96DD7 197 aa4.45□□□□□ -1.7
LINC00428-201ENST00000415620 TMEM87BQ96K49 555 aa4.45□□□□□ -1.7
LINC00428-201ENST00000415620 DPH2Q9BQC3 489 aaPredicted RBP4.45□□□□□ -1.7
LINC00428-201ENST00000415620 MBD1Q9UIS9 605 aaPredicted RBP4.45□□□□□ -1.7
LINC00428-201ENST00000415620 WWC3Q9ULE0 1092 aa4.45□□□□□ -1.7
LINC00428-201ENST00000415620 CEP131Q9UPN4 1083 aa4.45□□□□□ -1.7
LINC00428-201ENST00000415620 PCDHB5Q9Y5E4 795 aa4.45□□□□□ -1.7
LINC00428-201ENST00000415620 SIGLEC1Q9BZZ2 1709 aa4.45□□□□□ -1.7
LINC00428-201ENST00000415620 EPRSP07814 1512 aaKnown RBP4.45□□□□□ -1.7
LINC00428-201ENST00000415620 FER1L4A9Z1Z3 1794 aa4.45□□□□□ -1.7
LINC00428-201ENST00000415620 PGRP06401 933 aa4.44□□□□□ -1.7
LINC00428-201ENST00000415620 INSRRP14616 1297 aa4.44□□□□□ -1.7
LINC00428-201ENST00000415620 MAPK1P28482 360 aa4.44□□□□□ -1.7
LINC00428-201ENST00000415620 EFEMP1Q12805 493 aa4.44□□□□□ -1.7
LINC00428-201ENST00000415620 ADGRF1Q5T601 910 aa4.44□□□□□ -1.7
LINC00428-201ENST00000415620 DTWD2Q8NBA8 298 aa4.44□□□□□ -1.7
LINC00428-201ENST00000415620 EBF1Q9UH73 591 aa4.44□□□□□ -1.7
LINC00428-201ENST00000415620 SPG7Q9UQ90 795 aa4.44□□□□□ -1.7
LINC00428-201ENST00000415620 ZNF281Q9Y2X9 895 aa4.44□□□□□ -1.7
LINC00428-201ENST00000415620 PCDHA11Q9Y5I1 949 aa4.44□□□□□ -1.7
LINC00428-201ENST00000415620 RUSC2Q8N2Y8 1516 aa4.44□□□□□ -1.7
LINC00428-201ENST00000415620 N4BP3O15049 544 aa4.43□□□□□ -1.7
LINC00428-201ENST00000415620 MAPK8P45983 427 aa4.43□□□□□ -1.7
LINC00428-201ENST00000415620 SEPT6Q14141 434 aa4.43□□□□□ -1.7
LINC00428-201ENST00000415620 PUM1Q14671 1186 aaKnown RBP eCLIP4.43□□□□□ -1.7
LINC00428-201ENST00000415620 VMACQ2NL98 169 aa4.43□□□□□ -1.7
LINC00428-201ENST00000415620 CNKSR3Q6P9H4 555 aa4.43□□□□□ -1.7
LINC00428-201ENST00000415620 AGMOQ6ZNB7 445 aa4.43□□□□□ -1.7
LINC00428-201ENST00000415620 FRMD5Q7Z6J6 570 aa4.43□□□□□ -1.7
LINC00428-201ENST00000415620 RETREG2Q8NC44 543 aa4.43□□□□□ -1.7
LINC00428-201ENST00000415620 ACSF2Q96CM8 615 aaPredicted RBP4.43□□□□□ -1.7
LINC00428-201ENST00000415620 GPR20Q99678 358 aa4.43□□□□□ -1.7
LINC00428-201ENST00000415620 LUC7LQ9NQ29 371 aaKnown RBP4.43□□□□□ -1.7
LINC00428-201ENST00000415620 BIN2Q9UBW5 565 aaPredicted RBP4.43□□□□□ -1.7
LINC00428-201ENST00000415620 ADAM30Q9UKF2 790 aa4.43□□□□□ -1.7
LINC00428-201ENST00000415620 MYRFQ9Y2G1 1151 aa4.43□□□□□ -1.7
LINC00428-201ENST00000415620 PLB1Q6P1J6 1458 aa4.43□□□□□ -1.7
LINC00428-201ENST00000415620 GALK1P51570 392 aa4.42□□□□□ -1.7
LINC00428-201ENST00000415620 TEKQ02763 1124 aa4.42□□□□□ -1.7
LINC00428-201ENST00000415620 TTC37Q6PGP7 1564 aa4.42□□□□□ -1.7
LINC00428-201ENST00000415620 SIRT2Q8IXJ6 389 aa4.42□□□□□ -1.7
LINC00428-201ENST00000415620 LINC01599Q8WXQ3 324 aa4.42□□□□□ -1.7
LINC00428-201ENST00000415620 FRMD6Q96NE9 622 aa4.42□□□□□ -1.7
LINC00428-201ENST00000415620 ASB16Q96NS5 453 aa4.42□□□□□ -1.7
LINC00428-201ENST00000415620 G6PC3Q9BUM1 346 aa4.42□□□□□ -1.7
LINC00428-201ENST00000415620 ADAM7Q9H2U9 754 aa4.42□□□□□ -1.7
LINC00428-201ENST00000415620 TTF2Q9UNY4 1162 aaKnown RBP4.42□□□□□ -1.7
LINC00428-201ENST00000415620 SETBP1Q9Y6X0 1596 aa4.41□□□□□ -1.7
LINC00428-201ENST00000415620 RBM47A0AV96 593 aaKnown RBP4.41□□□□□ -1.7
LINC00428-201ENST00000415620 NOTOA8MTQ0 251 aa4.41□□□□□ -1.7
LINC00428-201ENST00000415620 LMNB1P20700 586 aa4.41□□□□□ -1.7
LINC00428-201ENST00000415620 EPHB3P54753 998 aa4.41□□□□□ -1.7
LINC00428-201ENST00000415620 PDE4BQ07343 736 aa4.41□□□□□ -1.7
LINC00428-201ENST00000415620 PDE4CQ08493 712 aa4.41□□□□□ -1.7
LINC00428-201ENST00000415620 OLFML2BQ68BL8 750 aa4.41□□□□□ -1.7
LINC00428-201ENST00000415620 SYT8Q8NBV8 401 aa4.41□□□□□ -1.7
LINC00428-201ENST00000415620 CYB5D2Q8WUJ1 264 aa4.41□□□□□ -1.7
LINC00428-201ENST00000415620 BDH2Q9BUT1 245 aa4.41□□□□□ -1.7
LINC00428-201ENST00000415620 CNTD2Q9H8S5 307 aa4.41□□□□□ -1.7
LINC00428-201ENST00000415620 CRTAC1Q9NQ79 661 aa4.41□□□□□ -1.7
LINC00428-201ENST00000415620 PALD1Q9ULE6 856 aa4.41□□□□□ -1.7
LINC00428-201ENST00000415620 ALKQ9UM73 1620 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms