RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 CHD2O14647 1828 aaKnown RBP12.96□□□□□ -0.33
SCN4B-202ENST00000415030 TCIRG1Q13488 830 aa12.96□□□□□ -0.33
SCN4B-202ENST00000415030 WDR93Q6P2C0 686 aa12.96□□□□□ -0.33
SCN4B-202ENST00000415030 TTLL7Q6ZT98 887 aa12.96□□□□□ -0.33
SCN4B-202ENST00000415030 COG1Q8WTW3 980 aa12.96□□□□□ -0.33
SCN4B-202ENST00000415030 ATRIPQ8WXE1 791 aa12.96□□□□□ -0.33
SCN4B-202ENST00000415030 GDAP1L1Q96MZ0 367 aa12.96□□□□□ -0.33
SCN4B-202ENST00000415030 YY1AP1Q9H869 796 aa12.96□□□□□ -0.33
SCN4B-202ENST00000415030 COL15A1P39059 1388 aa12.96□□□□□ -0.33
SCN4B-202ENST00000415030 ANO9A1A5B4 782 aa12.96□□□□□ -0.33
SCN4B-202ENST00000415030 MCM7P33993 719 aa12.96□□□□□ -0.33
SCN4B-202ENST00000415030 RCAN1P53805 252 aa12.96□□□□□ -0.33
SCN4B-202ENST00000415030 SETDB2Q96T68 719 aa12.96□□□□□ -0.33
SCN4B-202ENST00000415030 ANKZF1Q9H8Y5 726 aa12.96□□□□□ -0.33
SCN4B-202ENST00000415030 ERBB3P21860 1342 aa12.96□□□□□ -0.33
SCN4B-202ENST00000415030 ITGA6P23229 1130 aa12.96□□□□□ -0.34
SCN4B-202ENST00000415030 NF2P35240 595 aa12.96□□□□□ -0.34
SCN4B-202ENST00000415030 HLTFQ14527 1009 aaKnown RBP eCLIP12.96□□□□□ -0.34
SCN4B-202ENST00000415030 DTHD1Q6ZMT9 781 aa12.96□□□□□ -0.34
SCN4B-202ENST00000415030 CYB5R4Q7L1T6 521 aa12.96□□□□□ -0.34
SCN4B-202ENST00000415030 MAP3K14Q99558 947 aa12.96□□□□□ -0.34
SCN4B-202ENST00000415030 MTA3Q9BTC8 594 aa12.96□□□□□ -0.34
SCN4B-202ENST00000415030 BLZF1Q9H2G9 400 aa12.96□□□□□ -0.34
SCN4B-202ENST00000415030 ARMT1Q9H993 441 aa12.96□□□□□ -0.34
SCN4B-202ENST00000415030 RPS6KA5O75582 802 aa12.96□□□□□ -0.34
SCN4B-202ENST00000415030 POLD1P28340 1107 aa12.96□□□□□ -0.34
SCN4B-202ENST00000415030 PUM3Q15397 648 aaKnown RBP12.96□□□□□ -0.34
SCN4B-202ENST00000415030 CCDC121Q6ZUS5 278 aa12.96□□□□□ -0.34
SCN4B-202ENST00000415030 TBC1D10CQ8IV04 446 aa12.96□□□□□ -0.34
SCN4B-202ENST00000415030 CCDC170Q8IYT3 715 aa12.96□□□□□ -0.34
SCN4B-202ENST00000415030 CSGALNACT2Q8N6G5 542 aa12.96□□□□□ -0.34
SCN4B-202ENST00000415030 FAM89AQ96GI7 184 aa12.96□□□□□ -0.34
SCN4B-202ENST00000415030 PNKPQ96T60 521 aa12.96□□□□□ -0.34
SCN4B-202ENST00000415030 VPS54Q9P1Q0 977 aa12.96□□□□□ -0.34
SCN4B-202ENST00000415030 V9GY48 417 aaPredicted RBP12.96□□□□□ -0.34
SCN4B-202ENST00000415030 ENC1O14682 589 aa12.95□□□□□ -0.34
SCN4B-202ENST00000415030 APBA3O96018 575 aa12.95□□□□□ -0.34
SCN4B-202ENST00000415030 ATP2B2Q01814 1243 aa12.95□□□□□ -0.34
SCN4B-202ENST00000415030 PAK2Q13177 524 aa12.95□□□□□ -0.34
SCN4B-202ENST00000415030 NR5A1Q13285 461 aa12.95□□□□□ -0.34
SCN4B-202ENST00000415030 ZNF658Q5TYW1 1059 aaPredicted RBP12.95□□□□□ -0.34
SCN4B-202ENST00000415030 CRACR2BQ8N4Y2 399 aaPredicted RBP12.95□□□□□ -0.34
SCN4B-202ENST00000415030 RIMS1Q86UR5 1692 aaKnown RBP12.95□□□□□ -0.34
SCN4B-202ENST00000415030 A1BGP04217 495 aa12.95□□□□□ -0.34
SCN4B-202ENST00000415030 PCCAP05165 728 aaPredicted RBP12.95□□□□□ -0.34
SCN4B-202ENST00000415030 EPHB4P54760 987 aa12.95□□□□□ -0.34
SCN4B-202ENST00000415030 LPIN2Q92539 896 aa12.95□□□□□ -0.34
SCN4B-202ENST00000415030 STAMQ92783 540 aa12.95□□□□□ -0.34
SCN4B-202ENST00000415030 NOC4LQ9BVI4 516 aaKnown RBP12.95□□□□□ -0.34
SCN4B-202ENST00000415030 HYOU1Q9Y4L1 999 aa12.95□□□□□ -0.34
SCN4B-202ENST00000415030 A0A0G2JLW4 131 aa12.95□□□□□ -0.34
SCN4B-202ENST00000415030 CYP7A1P22680 504 aa12.95□□□□□ -0.34
SCN4B-202ENST00000415030 SOGA3Q5TF21 947 aa12.95□□□□□ -0.34
SCN4B-202ENST00000415030 CALML4Q96GE6 196 aa12.95□□□□□ -0.34
SCN4B-202ENST00000415030 LY9Q9HBG7 655 aa12.95□□□□□ -0.34
SCN4B-202ENST00000415030 CCNL1Q9UK58 526 aaPredicted RBP12.95□□□□□ -0.34
SCN4B-202ENST00000415030 TRAPPC10P48553 1259 aa12.94□□□□□ -0.34
SCN4B-202ENST00000415030 TCP11X2Q5H9J9 407 aa12.94□□□□□ -0.34
SCN4B-202ENST00000415030 ALS2CLQ60I27 953 aa12.94□□□□□ -0.34
SCN4B-202ENST00000415030 BMP2KQ9NSY1 1161 aaPredicted RBP12.94□□□□□ -0.34
SCN4B-202ENST00000415030 MAPK8IP1Q9UQF2 711 aa12.94□□□□□ -0.34
SCN4B-202ENST00000415030 RPN1P04843 607 aaKnown RBP12.94□□□□□ -0.34
SCN4B-202ENST00000415030 BAG6P46379 1132 aa12.94□□□□□ -0.34
SCN4B-202ENST00000415030 ALX1Q15699 326 aa12.94□□□□□ -0.34
SCN4B-202ENST00000415030 SMYD4Q8IYR2 804 aaPredicted RBP12.94□□□□□ -0.34
SCN4B-202ENST00000415030 RUBCNQ92622 972 aa12.94□□□□□ -0.34
SCN4B-202ENST00000415030 SELENOOQ9BVL4 669 aa12.94□□□□□ -0.34
SCN4B-202ENST00000415030 ZSWIM5Q9P217 1185 aa12.94□□□□□ -0.34
SCN4B-202ENST00000415030 LIMA1Q9UHB6 759 aaKnown RBP12.94□□□□□ -0.34
SCN4B-202ENST00000415030 GNPATO15228 680 aa12.94□□□□□ -0.34
SCN4B-202ENST00000415030 PARP1P09874 1014 aaKnown RBP12.94□□□□□ -0.34
SCN4B-202ENST00000415030 TNNC1P63316 161 aa12.94□□□□□ -0.34
SCN4B-202ENST00000415030 CCDC178Q5BJE1 867 aa12.94□□□□□ -0.34
SCN4B-202ENST00000415030 NT5DC1Q5TFE4 455 aa12.94□□□□□ -0.34
SCN4B-202ENST00000415030 STK32BQ9NY57 414 aa12.94□□□□□ -0.34
SCN4B-202ENST00000415030 RGPD1P0DJD0 1748 aa12.94□□□□□ -0.34
SCN4B-202ENST00000415030 IFI16Q16666 785 aaKnown RBP12.94□□□□□ -0.34
SCN4B-202ENST00000415030 TRPC5Q9UL62 973 aaPredicted RBP12.94□□□□□ -0.34
SCN4B-202ENST00000415030 CAPN7Q9Y6W3 813 aa12.94□□□□□ -0.34
SCN4B-202ENST00000415030 PCDH11XQ9BZA7 1347 aa12.94□□□□□ -0.34
SCN4B-202ENST00000415030 PCDH11YQ9BZA8 1340 aa12.94□□□□□ -0.34
SCN4B-202ENST00000415030 ASIC1P78348 528 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 CFAP221Q4G0U5 840 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 TMEM139Q8IV31 216 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 IFIH1Q9BYX4 1025 aaKnown RBP12.93□□□□□ -0.34
SCN4B-202ENST00000415030 PLEKHG2Q9H7P9 1386 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 WDR17Q8IZU2 1322 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 IRS4O14654 1257 aaPredicted RBP12.93□□□□□ -0.34
SCN4B-202ENST00000415030 N4BP1O75113 896 aaKnown RBP12.93□□□□□ -0.34
SCN4B-202ENST00000415030 GNAQP50148 359 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 EMBQ6PCB8 327 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 PIK3AP1Q6ZUJ8 805 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 CERS3Q8IU89 383 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 CCDC50Q8IVM0 306 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 SPATA5Q8NB90 893 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 EPSTI1Q96J88 318 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 LRRC27Q9C0I9 530 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 MMRN2Q9H8L6 949 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 NIP7Q9Y221 180 aaKnown RBP eCLIP12.93□□□□□ -0.34
SCN4B-202ENST00000415030 EZRP15311 586 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms