RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 ZDHHC9Q9Y397 364 aa18.01■□□□□ 0.47
SHMT2-202ENST00000414700 CYTH3O43739 400 aa18■□□□□ 0.47
SHMT2-202ENST00000414700 PARP1P09874 1014 aaKnown RBP18■□□□□ 0.47
SHMT2-202ENST00000414700 KIF5BP33176 963 aa18■□□□□ 0.47
SHMT2-202ENST00000414700 VGLL4Q14135 290 aa18■□□□□ 0.47
SHMT2-202ENST00000414700 PPP2R5BQ15173 497 aa18■□□□□ 0.47
SHMT2-202ENST00000414700 KCTD1Q719H9 257 aa18■□□□□ 0.47
SHMT2-202ENST00000414700 PIBF1Q8WXW3 757 aa18■□□□□ 0.47
SHMT2-202ENST00000414700 TMX2Q9Y320 296 aa18■□□□□ 0.47
SHMT2-202ENST00000414700 CNTNAP5Q8WYK1 1306 aa18■□□□□ 0.47
SHMT2-202ENST00000414700 KLRF2D3W0D1 207 aa17.99■□□□□ 0.47
SHMT2-202ENST00000414700 PPP1R12BO60237 982 aaPredicted RBP17.99■□□□□ 0.47
SHMT2-202ENST00000414700 NDUFB10O96000 172 aa17.99■□□□□ 0.47
SHMT2-202ENST00000414700 PTPRAP18433 802 aa17.99■□□□□ 0.47
SHMT2-202ENST00000414700 HMGN5P82970 282 aaKnown RBP17.99■□□□□ 0.47
SHMT2-202ENST00000414700 PPP4R3BQ5MIZ7 849 aa17.99■□□□□ 0.47
SHMT2-202ENST00000414700 FOXD4L5Q5VV16 416 aaPredicted RBP17.99■□□□□ 0.47
SHMT2-202ENST00000414700 CPLX2Q6PUV4 134 aaKnown RBP17.99■□□□□ 0.47
SHMT2-202ENST00000414700 FOXD4L4Q8WXT5 416 aaPredicted RBP17.99■□□□□ 0.47
SHMT2-202ENST00000414700 ZNF408Q9H9D4 720 aa17.99■□□□□ 0.47
SHMT2-202ENST00000414700 ARHGEF10LQ9HCE6 1279 aa17.99■□□□□ 0.47
SHMT2-202ENST00000414700 CDKL5O76039 1030 aa17.99■□□□□ 0.47
SHMT2-202ENST00000414700 SKOR2Q2VWA4 1001 aaPredicted RBP17.99■□□□□ 0.47
SHMT2-202ENST00000414700 LARP1BQ659C4 914 aaKnown RBP17.99■□□□□ 0.47
SHMT2-202ENST00000414700 SLFN13Q68D06 897 aa17.99■□□□□ 0.47
SHMT2-202ENST00000414700 TTBK2Q6IQ55 1244 aa17.99■□□□□ 0.47
SHMT2-202ENST00000414700 FAM184AQ8NB25 1140 aa17.99■□□□□ 0.47
SHMT2-202ENST00000414700 UBA5Q9GZZ9 404 aa17.99■□□□□ 0.47
SHMT2-202ENST00000414700 GPCPD1Q9NPB8 672 aa17.99■□□□□ 0.47
SHMT2-202ENST00000414700 FMNL1O95466 1100 aaPredicted RBP17.98■□□□□ 0.47
SHMT2-202ENST00000414700 NF2P35240 595 aa17.98■□□□□ 0.47
SHMT2-202ENST00000414700 ZNF543Q08ER8 600 aa17.98■□□□□ 0.47
SHMT2-202ENST00000414700 GMCL1P1Q8NEA9 526 aa17.98■□□□□ 0.47
SHMT2-202ENST00000414700 CNKSR2Q8WXI2 1034 aa17.98■□□□□ 0.47
SHMT2-202ENST00000414700 CLMNQ96JQ2 1002 aa17.98■□□□□ 0.47
SHMT2-202ENST00000414700 SNCAIPQ9Y6H5 919 aa17.98■□□□□ 0.47
SHMT2-202ENST00000414700 V9GY48 417 aaPredicted RBP17.98■□□□□ 0.47
SHMT2-202ENST00000414700 SLC1A4P43007 532 aa17.98■□□□□ 0.47
SHMT2-202ENST00000414700 SSRP1Q08945 709 aaKnown RBP17.98■□□□□ 0.47
SHMT2-202ENST00000414700 TTLL12Q14166 644 aaPredicted RBP17.98■□□□□ 0.47
SHMT2-202ENST00000414700 CCDC96Q2M329 555 aa17.98■□□□□ 0.47
SHMT2-202ENST00000414700 OTUD7BQ6GQQ9 843 aa17.98■□□□□ 0.47
SHMT2-202ENST00000414700 PICK1Q9NRD5 415 aa17.98■□□□□ 0.47
SHMT2-202ENST00000414700 CIZ1Q9ULV3 898 aaPredicted RBP17.98■□□□□ 0.47
SHMT2-202ENST00000414700 ZHX2Q9Y6X8 837 aa17.98■□□□□ 0.47
SHMT2-202ENST00000414700 STX6O43752 255 aa17.97■□□□□ 0.47
SHMT2-202ENST00000414700 SLC16A2P36021 539 aa17.97■□□□□ 0.47
SHMT2-202ENST00000414700 TERF1P54274 439 aa17.97■□□□□ 0.47
SHMT2-202ENST00000414700 MAP3K9P80192 1104 aa17.97■□□□□ 0.47
SHMT2-202ENST00000414700 GUCY1B3Q02153 619 aa17.97■□□□□ 0.47
SHMT2-202ENST00000414700 CCDC173Q0VFZ6 552 aa17.97■□□□□ 0.47
SHMT2-202ENST00000414700 SPP2Q13103 211 aa17.97■□□□□ 0.47
SHMT2-202ENST00000414700 PKN1Q16512 942 aa17.97■□□□□ 0.47
SHMT2-202ENST00000414700 NOL9Q5SY16 702 aaKnown RBP17.97■□□□□ 0.47
SHMT2-202ENST00000414700 MTMR2Q13614 643 aa17.96■□□□□ 0.47
SHMT2-202ENST00000414700 ASPRV1Q53RT3 343 aa17.96■□□□□ 0.47
SHMT2-202ENST00000414700 GBP4Q96PP9 640 aa17.96■□□□□ 0.47
SHMT2-202ENST00000414700 FEZ1Q99689 392 aa17.96■□□□□ 0.47
SHMT2-202ENST00000414700 RNF26Q9BY78 433 aaPredicted RBP17.96■□□□□ 0.47
SHMT2-202ENST00000414700 STK36Q9NRP7 1315 aa17.96■□□□□ 0.47
SHMT2-202ENST00000414700 VPS37CA5D8V6 355 aaPredicted RBP17.96■□□□□ 0.47
SHMT2-202ENST00000414700 TRIM75PA6NK02 468 aa17.96■□□□□ 0.47
SHMT2-202ENST00000414700 IREB2P48200 963 aaKnown RBP17.96■□□□□ 0.47
SHMT2-202ENST00000414700 TRIM22Q8IYM9 498 aa17.96■□□□□ 0.47
SHMT2-202ENST00000414700 SHISA4Q96DD7 197 aa17.96■□□□□ 0.47
SHMT2-202ENST00000414700 VCPKMTQ9H867 229 aa17.96■□□□□ 0.47
SHMT2-202ENST00000414700 VAT1LQ9HCJ6 419 aa17.96■□□□□ 0.47
SHMT2-202ENST00000414700 GINM1Q9NU53 330 aa17.96■□□□□ 0.47
SHMT2-202ENST00000414700 MTMR6Q9Y217 621 aa17.96■□□□□ 0.47
SHMT2-202ENST00000414700 GAS2L3Q86XJ1 694 aa17.95■□□□□ 0.46
SHMT2-202ENST00000414700 GMCL1Q96IK5 515 aa17.95■□□□□ 0.46
SHMT2-202ENST00000414700 PPP1R9BQ96SB3 815 aa17.95■□□□□ 0.46
SHMT2-202ENST00000414700 ALG1Q9BT22 464 aa17.95■□□□□ 0.46
SHMT2-202ENST00000414700 GPBP1L1Q9HC44 474 aaPredicted RBP17.95■□□□□ 0.46
SHMT2-202ENST00000414700 GOPCQ9HD26 462 aa17.95■□□□□ 0.46
SHMT2-202ENST00000414700 PTPRFP10586 1907 aa17.95■□□□□ 0.46
SHMT2-202ENST00000414700 PRPF3O43395 683 aaKnown RBP17.94■□□□□ 0.46
SHMT2-202ENST00000414700 OFD1O75665 1012 aa17.94■□□□□ 0.46
SHMT2-202ENST00000414700 BRD1O95696 1058 aa17.94■□□□□ 0.46
SHMT2-202ENST00000414700 ITGBL1O95965 494 aaPredicted RBP17.94■□□□□ 0.46
SHMT2-202ENST00000414700 GNAQP50148 359 aa17.94■□□□□ 0.46
SHMT2-202ENST00000414700 MAP3K11Q16584 847 aa17.94■□□□□ 0.46
SHMT2-202ENST00000414700 FAM83BQ5T0W9 1011 aa17.94■□□□□ 0.46
SHMT2-202ENST00000414700 GPATCH4Q5T3I0 446 aaKnown RBP17.94■□□□□ 0.46
SHMT2-202ENST00000414700 ZNF280CQ8ND82 737 aa17.94■□□□□ 0.46
SHMT2-202ENST00000414700 DCAF4Q8WV16 495 aa17.94■□□□□ 0.46
SHMT2-202ENST00000414700 KIAA1683Q9H0B3 1180 aa17.94■□□□□ 0.46
SHMT2-202ENST00000414700 ELP3Q9H9T3 547 aa17.94■□□□□ 0.46
SHMT2-202ENST00000414700 SYNPO2Q9UMS6 1093 aa17.94■□□□□ 0.46
SHMT2-202ENST00000414700 CSADQ9Y600 493 aa17.94■□□□□ 0.46
SHMT2-202ENST00000414700 USP17L10C9JJH3 530 aa17.94■□□□□ 0.46
SHMT2-202ENST00000414700 DEXIO95424 95 aa17.94■□□□□ 0.46
SHMT2-202ENST00000414700 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.94■□□□□ 0.46
SHMT2-202ENST00000414700 HOMER1Q86YM7 354 aa17.94■□□□□ 0.46
SHMT2-202ENST00000414700 CHAMP1Q96JM3 812 aa17.94■□□□□ 0.46
SHMT2-202ENST00000414700 SPZ1Q9BXG8 430 aa17.94■□□□□ 0.46
SHMT2-202ENST00000414700 TMEM232C9JQI7 657 aa17.93■□□□□ 0.46
SHMT2-202ENST00000414700 BMP3P12645 472 aa17.93■□□□□ 0.46
SHMT2-202ENST00000414700 PDCP20941 246 aa17.93■□□□□ 0.46
SHMT2-202ENST00000414700 NUCB2P80303 420 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms