RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 POLR2AP24928 1970 aaKnown RBP6.08□□□□□ -1.44
VPS41-205ENST00000414632 SHTN1A0MZ66 631 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 YDJCA8MPS7 323 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 FZD9O00144 591 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 CAPN5O15484 640 aaPredicted RBP6.08□□□□□ -1.44
VPS41-205ENST00000414632 ECE2O60344 883 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 UBTFL1P0CB47 393 aaPredicted RBP6.08□□□□□ -1.44
VPS41-205ENST00000414632 ATP4AP20648 1035 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 ARSDP51689 593 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 C1QTNF8P60827 252 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 CHRNDQ07001 517 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 CXCL9Q07325 125 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 KIAA2012Q0VF49 1180 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 CCDC57Q2TAC2 916 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 WDR44Q5JSH3 913 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 ZKSCAN2Q63HK3 967 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 PDE12Q6L8Q7 609 aaKnown RBP6.08□□□□□ -1.44
VPS41-205ENST00000414632 PI16Q6UXB8 463 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 ATF7IPQ6VMQ6 1270 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 C16orf71Q8IYS4 520 aaPredicted RBP6.08□□□□□ -1.44
VPS41-205ENST00000414632 LINC00528Q8N1L1 170 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 PANK1Q8TE04 598 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 ZIC5Q96T25 663 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 OSBPL7Q9BZF2 842 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 ACBD3Q9H3P7 528 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 ELP3Q9H9T3 547 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 CAPN10Q9HC96 672 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 ZFYVE28Q9HCC9 887 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 CNNM1Q9NRU3 951 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 BSDC1Q9NW68 430 aaPredicted RBP6.08□□□□□ -1.44
VPS41-205ENST00000414632 ARAP2Q8WZ64 1704 aa6.08□□□□□ -1.44
VPS41-205ENST00000414632 CEP350Q5VT06 3117 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 GIPC1O14908 333 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 IPO8O15397 1037 aaKnown RBP6.07□□□□□ -1.44
VPS41-205ENST00000414632 RLBP1P12271 317 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 BMP2P12643 396 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 MSX1P28360 303 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 IRS1P35568 1242 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 KCNJ4P48050 445 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 TRIP4Q15650 581 aaPredicted RBP6.07□□□□□ -1.44
VPS41-205ENST00000414632 LRRC24Q50LG9 513 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 INTS3Q68E01 1043 aaKnown RBP6.07□□□□□ -1.44
VPS41-205ENST00000414632 LDHAL6AQ6ZMR3 332 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 TXNRD3Q86VQ6 643 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 FTSJ3Q8IY81 847 aaKnown RBP6.07□□□□□ -1.44
VPS41-205ENST00000414632 SLC43A3Q8NBI5 491 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 SNX29Q8TEQ0 813 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 ARHGAP45Q92619 1136 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 EYA3Q99504 573 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 TINF2Q9BSI4 451 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 MXD3Q9BW11 206 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 TANGO6Q9C0B7 1094 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 ZC3H12CQ9C0D7 883 aaKnown RBP6.07□□□□□ -1.44
VPS41-205ENST00000414632 SIL1Q9H173 461 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 ZNRF3Q9ULT6 936 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 JAG2Q9Y219 1238 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 KCNMB2Q9Y691 235 aa6.07□□□□□ -1.44
VPS41-205ENST00000414632 ZNF804BA4D1E1 1349 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 PSMD14O00487 310 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 PHACTR2O75167 634 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 POLR3DP05423 398 aaPredicted RBP6.06□□□□□ -1.44
VPS41-205ENST00000414632 VEGFAP15692 232 aaPredicted RBP6.06□□□□□ -1.44
VPS41-205ENST00000414632 RHOQP17081 205 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 EPS15P42566 896 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 TNNI2P48788 182 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 GMPSP49915 693 aaPredicted RBP6.06□□□□□ -1.44
VPS41-205ENST00000414632 RABL6Q3YEC7 729 aaPredicted RBP6.06□□□□□ -1.44
VPS41-205ENST00000414632 C6orf118Q5T5N4 469 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 CIAPIN1Q6FI81 312 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 LYSMD3Q7Z3D4 306 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 ITPRIPQ8IWB1 547 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 DZIP1LQ8IYY4 767 aaKnown RBP6.06□□□□□ -1.44
VPS41-205ENST00000414632 GPC2Q8N158 579 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 RNF217Q8TC41 542 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 ANKRD2Q9GZV1 360 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 C12orf49Q9H741 205 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 TIMMDC1Q9NPL8 285 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 PRKAG2Q9UGJ0 569 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 HACL1Q9UJ83 578 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 DDX41Q9UJV9 622 aaKnown RBP6.06□□□□□ -1.44
VPS41-205ENST00000414632 RCAN3Q9UKA8 241 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 PA2G4Q9UQ80 394 aaKnown RBP6.06□□□□□ -1.44
VPS41-205ENST00000414632 TRPM7Q96QT4 1865 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 ECM29Q5VYK3 1845 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 MED23Q9ULK4 1368 aa6.06□□□□□ -1.44
VPS41-205ENST00000414632 A0A1B0GTH6 734 aa6.05□□□□□ -1.44
VPS41-205ENST00000414632 A0A1W2PNR3 127 aa6.05□□□□□ -1.44
VPS41-205ENST00000414632 TOMM70O94826 608 aa6.05□□□□□ -1.44
VPS41-205ENST00000414632 EPHX2P34913 555 aa6.05□□□□□ -1.44
VPS41-205ENST00000414632 RFX5P48382 616 aaPredicted RBP6.05□□□□□ -1.44
VPS41-205ENST00000414632 HTRA3P83110 453 aa6.05□□□□□ -1.44
VPS41-205ENST00000414632 PTPN12Q05209 780 aaKnown RBP6.05□□□□□ -1.44
VPS41-205ENST00000414632 GNL2Q13823 731 aaKnown RBP6.05□□□□□ -1.44
VPS41-205ENST00000414632 ZNF394Q53GI3 561 aa6.05□□□□□ -1.44
VPS41-205ENST00000414632 METTL24Q5JXM2 366 aa6.05□□□□□ -1.44
VPS41-205ENST00000414632 C20orf194Q5TEA3 1177 aa6.05□□□□□ -1.44
VPS41-205ENST00000414632 TRIM67Q6ZTA4 783 aa6.05□□□□□ -1.44
VPS41-205ENST00000414632 ZNF654Q8IZM8 581 aa6.05□□□□□ -1.44
VPS41-205ENST00000414632 FAM177A1Q8N128 213 aaPredicted RBP6.05□□□□□ -1.44
VPS41-205ENST00000414632 VPS33BQ9H267 617 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms