RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 CCAR1Q8IX12 1150 aaKnown RBP10.05□□□□□ -0.8
UPF3AP1-201ENST00000413731 GTF3C2Q8WUA4 911 aaPredicted RBP10.05□□□□□ -0.8
UPF3AP1-201ENST00000413731 CALR3Q96L12 384 aaKnown RBP10.05□□□□□ -0.8
UPF3AP1-201ENST00000413731 SMCHD1A6NHR9 2005 aa10.05□□□□□ -0.8
UPF3AP1-201ENST00000413731 BAZ2AQ9UIF9 1905 aaKnown RBP10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 BAG3O95817 575 aa10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 GH2P01242 217 aa10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 HLA-DOAP06340 250 aa10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 PPP4CP60510 307 aa10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 DYNLL1P63167 89 aaKnown RBP10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 ATP8B2P98198 1209 aa10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 TTC39AQ5SRH9 613 aa10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 WDR78Q5VTH9 848 aa10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 USP17L2Q6R6M4 530 aa10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 C12orf42Q96LP6 360 aa10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 FAM161BQ96MY7 647 aa10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 DCBLD2Q96PD2 775 aa10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 FEZ1Q99689 392 aa10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 DBNDD2Q9BQY9 259 aa10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 SENP6Q9GZR1 1112 aaPredicted RBP10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 CWC22Q9HCG8 908 aaKnown RBP10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 PIH1D3Q9NQM4 214 aaKnown RBP10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 EYSQ5T1H1 3165 aa10.04□□□□□ -0.8
UPF3AP1-201ENST00000413731 HMMRO75330 724 aa10.03□□□□□ -0.8
UPF3AP1-201ENST00000413731 SURF6O75683 361 aaKnown RBP10.03□□□□□ -0.8
UPF3AP1-201ENST00000413731 CYP2E1P05181 493 aaPredicted RBP10.03□□□□□ -0.8
UPF3AP1-201ENST00000413731 VCAM1P19320 739 aa10.03□□□□□ -0.8
UPF3AP1-201ENST00000413731 TNNI3KQ59H18 835 aa10.03□□□□□ -0.8
UPF3AP1-201ENST00000413731 ZNF454Q8N9F8 522 aa10.03□□□□□ -0.8
UPF3AP1-201ENST00000413731 TRPV1Q8NER1 839 aa10.03□□□□□ -0.8
UPF3AP1-201ENST00000413731 SSH3Q8TE77 659 aa10.03□□□□□ -0.8
UPF3AP1-201ENST00000413731 SLC39A7Q92504 469 aa10.03□□□□□ -0.8
UPF3AP1-201ENST00000413731 ZDHHC16Q969W1 377 aa10.03□□□□□ -0.8
UPF3AP1-201ENST00000413731 GINM1Q9NU53 330 aa10.03□□□□□ -0.8
UPF3AP1-201ENST00000413731 DDX20Q9UHI6 824 aaKnown RBP10.03□□□□□ -0.8
UPF3AP1-201ENST00000413731 RABGAP1Q9Y3P9 1069 aa10.03□□□□□ -0.8
UPF3AP1-201ENST00000413731 FPGT-TNNI3KV9GXZ4 949 aa10.03□□□□□ -0.8
UPF3AP1-201ENST00000413731 MYH7P12883 1935 aa10.02□□□□□ -0.81
UPF3AP1-201ENST00000413731 POTEB2H3BUK9 544 aa10.02□□□□□ -0.81
UPF3AP1-201ENST00000413731 ZAP70P43403 619 aa10.02□□□□□ -0.81
UPF3AP1-201ENST00000413731 RTP1P59025 263 aa10.02□□□□□ -0.81
UPF3AP1-201ENST00000413731 GRB14Q14449 540 aa10.02□□□□□ -0.81
UPF3AP1-201ENST00000413731 MFSD14CQ5VZR4 134 aa10.02□□□□□ -0.81
UPF3AP1-201ENST00000413731 PPP2R2DQ66LE6 453 aa10.02□□□□□ -0.81
UPF3AP1-201ENST00000413731 FOXP4Q8IVH2 680 aaPredicted RBP10.02□□□□□ -0.81
UPF3AP1-201ENST00000413731 MIGA1Q8NAN2 632 aa10.02□□□□□ -0.81
UPF3AP1-201ENST00000413731 NPLOC4Q8TAT6 608 aa10.02□□□□□ -0.81
UPF3AP1-201ENST00000413731 ACER1Q8TDN7 264 aa10.02□□□□□ -0.81
UPF3AP1-201ENST00000413731 SPIRE2Q8WWL2 714 aa10.02□□□□□ -0.81
UPF3AP1-201ENST00000413731 ZBTB40Q9NUA8 1239 aa10.02□□□□□ -0.81
UPF3AP1-201ENST00000413731 TLR7Q9NYK1 1049 aaKnown RBP10.02□□□□□ -0.81
UPF3AP1-201ENST00000413731 BTBD7Q9P203 1132 aa10.02□□□□□ -0.81
UPF3AP1-201ENST00000413731 MYO9BQ13459 2157 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 SLC15A5A6NIM6 579 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 USP17L15C9J2P7 530 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 USP17L13C9JLJ4 530 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 USP17L11C9JVI0 530 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 USP17L18D6R9N7 530 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 USP17L22D6RA61 530 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 USP17L17D6RBQ6 530 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 USP17L19D6RCP7 530 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 USP17L20D6RJB6 530 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 DNM1LO00429 736 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 CYBAP13498 195 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 CYP7A1P22680 504 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 PTPREP23469 700 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 CNGA1P29973 690 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 CYP2C19P33261 490 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 FOSBP53539 338 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 CCNA1P78396 465 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 USP17L24Q0WX57 530 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 RAB3GAP1Q15042 981 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 ZNF697Q5TEC3 545 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 FAM109BQ6ICB4 259 aaPredicted RBP10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 ERC1Q8IUD2 1116 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 LPAR1Q92633 364 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 EDC3Q96F86 508 aaKnown RBP10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 LBHD1Q9BQE6 289 aaPredicted RBP10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 DBNLQ9UJU6 430 aaKnown RBP10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 EXOC6BQ9Y2D4 811 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 PRUNE2Q8WUY3 3088 aa10.01□□□□□ -0.81
UPF3AP1-201ENST00000413731 CDH23Q9H251 3354 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 MSCO60682 206 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 IDH1O75874 414 aaKnown RBP10□□□□□ -0.81
UPF3AP1-201ENST00000413731 GLRX3O76003 335 aaKnown RBP10□□□□□ -0.81
UPF3AP1-201ENST00000413731 IGHA2P01877 340 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 HOXC6P09630 235 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 GUCY1A2P33402 732 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 USP5P45974 858 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 PRSS12P56730 875 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 CCDC158Q5M9N0 1113 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 C9orf50Q5SZB4 431 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 GJC2Q5T442 439 aaPredicted RBP10□□□□□ -0.81
UPF3AP1-201ENST00000413731 ANO1Q5XXA6 986 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 TATDN1Q6P1N9 297 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 LBX2Q6XYB7 198 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 CATSPERGQ6ZRH7 1159 aa10□□□□□ -0.81
UPF3AP1-201ENST00000413731 RPAP2Q8IXW5 612 aaPredicted RBP10□□□□□ -0.81
UPF3AP1-201ENST00000413731 SP7Q8TDD2 431 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms